RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 ABHD10Q9NUJ1 306 aa4.91□□□□□ -1.62
HMGB1P16-201ENST00000447155 GAR1Q9NY12 217 aaKnown RBP4.91□□□□□ -1.62
HMGB1P16-201ENST00000447155 RAB21Q9UL25 225 aa4.91□□□□□ -1.62
HMGB1P16-201ENST00000447155 TRPC5Q9UL62 973 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P16-201ENST00000447155 DERAQ9Y315 318 aa4.91□□□□□ -1.62
HMGB1P16-201ENST00000447155 ENTPD2Q9Y5L3 495 aa4.91□□□□□ -1.62
HMGB1P16-201ENST00000447155 DDX49Q9Y6V7 483 aaKnown RBP4.91□□□□□ -1.62
HMGB1P16-201ENST00000447155 PZPP20742 1482 aa4.91□□□□□ -1.62
HMGB1P16-201ENST00000447155 GRIN2AQ12879 1464 aa4.91□□□□□ -1.62
HMGB1P16-201ENST00000447155 ABCC10Q5T3U5 1492 aa4.91□□□□□ -1.62
HMGB1P16-201ENST00000447155 PPRC1Q5VV67 1664 aaKnown RBP4.91□□□□□ -1.62
HMGB1P16-201ENST00000447155 PBRM1Q86U86 1689 aa4.91□□□□□ -1.62
HMGB1P16-201ENST00000447155 CEP152O94986 1710 aa4.91□□□□□ -1.62
HMGB1P16-201ENST00000447155 ASXL1Q8IXJ9 1541 aa4.91□□□□□ -1.62
HMGB1P16-201ENST00000447155 ABCA10Q8WWZ4 1543 aa4.91□□□□□ -1.62
HMGB1P16-201ENST00000447155 LAMC3Q9Y6N6 1575 aa4.91□□□□□ -1.62
HMGB1P16-201ENST00000447155 GPRASP1Q5JY77 1395 aa4.91□□□□□ -1.62
HMGB1P16-201ENST00000447155 CDC42BPAQ5VT25 1732 aa4.9□□□□□ -1.62
HMGB1P16-201ENST00000447155 KIAA1210Q9ULL0 1709 aa4.9□□□□□ -1.62
HMGB1P16-201ENST00000447155 TBC1D3DA0A087WVF3 549 aa4.9□□□□□ -1.63
HMGB1P16-201ENST00000447155 TBC1D3IA0A087WXS9 549 aa4.9□□□□□ -1.63
HMGB1P16-201ENST00000447155 TBC1D3EA0A087X179 549 aa4.9□□□□□ -1.63
HMGB1P16-201ENST00000447155 TBC1D3KA0A087X1G2 549 aa4.9□□□□□ -1.63
HMGB1P16-201ENST00000447155 A0A1B0GVC2 190 aa4.9□□□□□ -1.63
HMGB1P16-201ENST00000447155 TBC1D3BA6NDS4 549 aa4.9□□□□□ -1.63
HMGB1P16-201ENST00000447155 TBC1D3FA6NER0 549 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P16-201ENST00000447155 TBC1D3LB9A6J9 549 aa4.9□□□□□ -1.63
HMGB1P16-201ENST00000447155 ZNF213O14771 459 aa4.9□□□□□ -1.63
HMGB1P16-201ENST00000447155 RHOBTB3O94955 611 aa4.9□□□□□ -1.63
HMGB1P16-201ENST00000447155 AGR2O95994 175 aa4.9□□□□□ -1.63
HMGB1P16-201ENST00000447155 C1RP00736 705 aa4.9□□□□□ -1.63
HMGB1P16-201ENST00000447155 MBPP02686 304 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P16-201ENST00000447155 GCP02774 474 aa4.9□□□□□ -1.63
HMGB1P16-201ENST00000447155 CYP3A4P08684 503 aa4.9□□□□□ -1.63
HMGB1P16-201ENST00000447155 TBC1D3HP0C7X1 549 aa4.9□□□□□ -1.63
HMGB1P16-201ENST00000447155 C6P13671 934 aa4.9□□□□□ -1.63
HMGB1P16-201ENST00000447155 APEHP13798 732 aaKnown RBP4.9□□□□□ -1.63
HMGB1P16-201ENST00000447155 RXRAP19793 462 aa4.9□□□□□ -1.63
HMGB1P16-201ENST00000447155 CXCR5P32302 372 aa4.9□□□□□ -1.63
HMGB1P16-201ENST00000447155 PLA2G5P39877 138 aa4.9□□□□□ -1.63
HMGB1P16-201ENST00000447155 BUD31P41223 144 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P16-201ENST00000447155 RBM5P52756 815 aaKnown RBP eCLIP4.9□□□□□ -1.63
HMGB1P16-201ENST00000447155 COPB1P53618 953 aaKnown RBP4.9□□□□□ -1.63
HMGB1P16-201ENST00000447155 SOX10P56693 466 aa4.9□□□□□ -1.63
HMGB1P16-201ENST00000447155 FAM3BP58499 235 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P16-201ENST00000447155 CYP4F2P78329 520 aa4.9□□□□□ -1.63
HMGB1P16-201ENST00000447155 NUCB2P80303 420 aa4.9□□□□□ -1.63
HMGB1P16-201ENST00000447155 RNASELQ05823 741 aaKnown RBP4.9□□□□□ -1.63
HMGB1P16-201ENST00000447155 DCTN1Q14203 1278 aa4.9□□□□□ -1.63
HMGB1P16-201ENST00000447155 ERCC6LQ2NKX8 1250 aa4.9□□□□□ -1.63
HMGB1P16-201ENST00000447155 TBC1D3GQ6DHY5 549 aa4.9□□□□□ -1.63
HMGB1P16-201ENST00000447155 TBC1D3CQ6IPX1 549 aa4.9□□□□□ -1.63
HMGB1P16-201ENST00000447155 WDR93Q6P2C0 686 aa4.9□□□□□ -1.63
HMGB1P16-201ENST00000447155 CEP85Q6P2H3 762 aa4.9□□□□□ -1.63
HMGB1P16-201ENST00000447155 NAPRTQ6XQN6 538 aa4.9□□□□□ -1.63
HMGB1P16-201ENST00000447155 RASGRP2Q7LDG7 609 aa4.9□□□□□ -1.63
HMGB1P16-201ENST00000447155 BCDIN3DQ7Z5W3 292 aaKnown RBP4.9□□□□□ -1.63
HMGB1P16-201ENST00000447155 TBC1D3Q8IZP1 549 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P16-201ENST00000447155 Q8N1X5 172 aa4.9□□□□□ -1.63
HMGB1P16-201ENST00000447155 CEP70Q8NHQ1 597 aa4.9□□□□□ -1.63
HMGB1P16-201ENST00000447155 ZNF622Q969S3 477 aaKnown RBP eCLIP4.9□□□□□ -1.63
HMGB1P16-201ENST00000447155 DAZAP1Q96EP5 407 aaKnown RBP4.9□□□□□ -1.63
HMGB1P16-201ENST00000447155 RWDD1Q9H446 243 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P16-201ENST00000447155 NOD2Q9HC29 1040 aa4.9□□□□□ -1.63
HMGB1P16-201ENST00000447155 TMEM51Q9NW97 253 aa4.9□□□□□ -1.63
HMGB1P16-201ENST00000447155 PI4KBQ9UBF8 816 aa4.9□□□□□ -1.63
HMGB1P16-201ENST00000447155 FZD4Q9ULV1 537 aa4.9□□□□□ -1.63
HMGB1P16-201ENST00000447155 HS3ST3A1Q9Y663 406 aa4.9□□□□□ -1.63
HMGB1P16-201ENST00000447155 IQGAP2Q13576 1575 aa4.9□□□□□ -1.63
HMGB1P16-201ENST00000447155 USP32Q8NFA0 1604 aa4.9□□□□□ -1.63
HMGB1P16-201ENST00000447155 AK9Q5TCS8 1911 aa4.89□□□□□ -1.63
HMGB1P16-201ENST00000447155 SPHKAPQ2M3C7 1700 aa4.89□□□□□ -1.63
HMGB1P16-201ENST00000447155 ADGRL1O94910 1474 aa4.89□□□□□ -1.63
HMGB1P16-201ENST00000447155 CDK13Q14004 1512 aaKnown RBP4.89□□□□□ -1.63
HMGB1P16-201ENST00000447155 C3orf70A6NLC5 250 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P16-201ENST00000447155 TTC34A8MYJ7 566 aa4.89□□□□□ -1.63
HMGB1P16-201ENST00000447155 MGST3O14880 152 aa4.89□□□□□ -1.63
HMGB1P16-201ENST00000447155 SEPT4O43236 478 aa4.89□□□□□ -1.63
HMGB1P16-201ENST00000447155 HNRNPRO43390 633 aaKnown RBP4.89□□□□□ -1.63
HMGB1P16-201ENST00000447155 WDHD1O75717 1129 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P16-201ENST00000447155 HEXIM1O94992 359 aaKnown RBP4.89□□□□□ -1.63
HMGB1P16-201ENST00000447155 POLBP06746 335 aa4.89□□□□□ -1.63
HMGB1P16-201ENST00000447155 CYP21A2P08686 494 aa4.89□□□□□ -1.63
HMGB1P16-201ENST00000447155 CNPP09543 421 aaKnown RBP4.89□□□□□ -1.63
HMGB1P16-201ENST00000447155 CD53P19397 219 aa4.89□□□□□ -1.63
HMGB1P16-201ENST00000447155 CNTFP26441 200 aa4.89□□□□□ -1.63
HMGB1P16-201ENST00000447155 GRK5P34947 590 aa4.89□□□□□ -1.63
HMGB1P16-201ENST00000447155 TNNT3P45378 269 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P16-201ENST00000447155 CACNA2D1P54289 1103 aa4.89□□□□□ -1.63
HMGB1P16-201ENST00000447155 TLE2Q04725 743 aa4.89□□□□□ -1.63
HMGB1P16-201ENST00000447155 UBE3AQ05086 875 aa4.89□□□□□ -1.63
HMGB1P16-201ENST00000447155 PDCLQ13371 301 aa4.89□□□□□ -1.63
HMGB1P16-201ENST00000447155 SLC12A1Q13621 1099 aa4.89□□□□□ -1.63
HMGB1P16-201ENST00000447155 TSTD2Q5T7W7 516 aa4.89□□□□□ -1.63
HMGB1P16-201ENST00000447155 JAKMIP3Q5VZ66 844 aa4.89□□□□□ -1.63
HMGB1P16-201ENST00000447155 CPOQ8IVL8 374 aa4.89□□□□□ -1.63
HMGB1P16-201ENST00000447155 FSIP1Q8NA03 581 aa4.89□□□□□ -1.63
HMGB1P16-201ENST00000447155 USP38Q8NB14 1042 aa4.89□□□□□ -1.63
HMGB1P16-201ENST00000447155 CAGE1Q8TC20 777 aa4.89□□□□□ -1.63
HMGB1P16-201ENST00000447155 ASB12Q8WXK4 309 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms