RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 ATP5F1P24539 256 aaPredicted RBP5.62□□□□□ -1.51
TM9SF3-202ENST00000443638 YY1P25490 414 aa5.62□□□□□ -1.51
TM9SF3-202ENST00000443638 MSX2P35548 267 aaPredicted RBP5.62□□□□□ -1.51
TM9SF3-202ENST00000443638 HNF1BP35680 557 aa5.62□□□□□ -1.51
TM9SF3-202ENST00000443638 PCP4P48539 62 aa5.62□□□□□ -1.51
TM9SF3-202ENST00000443638 CD97P48960 835 aa5.62□□□□□ -1.51
TM9SF3-202ENST00000443638 DGKQP52824 942 aa5.62□□□□□ -1.51
TM9SF3-202ENST00000443638 EPHB3P54753 998 aa5.62□□□□□ -1.51
TM9SF3-202ENST00000443638 NEXNQ0ZGT2 675 aa5.62□□□□□ -1.51
TM9SF3-202ENST00000443638 ZNF628Q5EBL2 1059 aa5.62□□□□□ -1.51
TM9SF3-202ENST00000443638 DNAJC21Q5F1R6 531 aaKnown RBP5.62□□□□□ -1.51
TM9SF3-202ENST00000443638 ZNF667Q5HYK9 610 aa5.62□□□□□ -1.51
TM9SF3-202ENST00000443638 METTL24Q5JXM2 366 aa5.62□□□□□ -1.51
TM9SF3-202ENST00000443638 TBC1D3GQ6DHY5 549 aa5.62□□□□□ -1.51
TM9SF3-202ENST00000443638 SFRP4Q6FHJ7 346 aaPredicted RBP5.62□□□□□ -1.51
TM9SF3-202ENST00000443638 TBC1D3CQ6IPX1 549 aa5.62□□□□□ -1.51
TM9SF3-202ENST00000443638 ZNF605Q86T29 641 aa5.62□□□□□ -1.51
TM9SF3-202ENST00000443638 DNAAF5Q86Y56 855 aa5.62□□□□□ -1.51
TM9SF3-202ENST00000443638 IZUMO1Q8IYV9 350 aa5.62□□□□□ -1.51
TM9SF3-202ENST00000443638 GPR135Q8IZ08 494 aa5.62□□□□□ -1.51
TM9SF3-202ENST00000443638 TBC1D3Q8IZP1 549 aaPredicted RBP5.62□□□□□ -1.51
TM9SF3-202ENST00000443638 SYNE4Q8N205 404 aa5.62□□□□□ -1.51
TM9SF3-202ENST00000443638 POC5Q8NA72 575 aa5.62□□□□□ -1.51
TM9SF3-202ENST00000443638 POMGNT2Q8NAT1 580 aa5.62□□□□□ -1.51
TM9SF3-202ENST00000443638 BEND2Q8NDZ0 799 aa5.62□□□□□ -1.51
TM9SF3-202ENST00000443638 SUPT20HQ8NEM7 779 aa5.62□□□□□ -1.51
TM9SF3-202ENST00000443638 GABPB2Q8TAK5 448 aaPredicted RBP5.62□□□□□ -1.51
TM9SF3-202ENST00000443638 GDAP1Q8TB36 358 aa5.62□□□□□ -1.51
TM9SF3-202ENST00000443638 PRPF31Q8WWY3 499 aaKnown RBP5.62□□□□□ -1.51
TM9SF3-202ENST00000443638 RAB40AQ8WXH6 277 aa5.62□□□□□ -1.51
TM9SF3-202ENST00000443638 VPS33AQ96AX1 596 aa5.62□□□□□ -1.51
TM9SF3-202ENST00000443638 ZNF653Q96CK0 615 aa5.62□□□□□ -1.51
TM9SF3-202ENST00000443638 WDFY2Q96P53 400 aa5.62□□□□□ -1.51
TM9SF3-202ENST00000443638 MAP7D2Q96T17 732 aa5.62□□□□□ -1.51
TM9SF3-202ENST00000443638 EIF3CQ99613 913 aaKnown RBP5.62□□□□□ -1.51
TM9SF3-202ENST00000443638 STRA6Q9BX79 667 aa5.62□□□□□ -1.51
TM9SF3-202ENST00000443638 TMEM168Q9H0V1 697 aa5.62□□□□□ -1.51
TM9SF3-202ENST00000443638 EPC1Q9H2F5 836 aa5.62□□□□□ -1.51
TM9SF3-202ENST00000443638 SIRT5Q9NXA8 310 aa5.62□□□□□ -1.51
TM9SF3-202ENST00000443638 SELENONQ9NZV5 590 aa5.62□□□□□ -1.51
TM9SF3-202ENST00000443638 WDR35Q9P2L0 1181 aa5.62□□□□□ -1.51
TM9SF3-202ENST00000443638 HDAC6Q9UBN7 1215 aa5.62□□□□□ -1.51
TM9SF3-202ENST00000443638 NR2E1Q9Y466 385 aa5.62□□□□□ -1.51
TM9SF3-202ENST00000443638 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.62□□□□□ -1.51
TM9SF3-202ENST00000443638 COPG1Q9Y678 874 aaKnown RBP5.62□□□□□ -1.51
TM9SF3-202ENST00000443638 CAPN7Q9Y6W3 813 aa5.62□□□□□ -1.51
TM9SF3-202ENST00000443638 CCDC187A0A096LP49 1063 aa5.61□□□□□ -1.51
TM9SF3-202ENST00000443638 A8MVJ9 347 aa5.61□□□□□ -1.51
TM9SF3-202ENST00000443638 PER2O15055 1255 aa5.61□□□□□ -1.51
TM9SF3-202ENST00000443638 HYAL3O43820 417 aaPredicted RBP5.61□□□□□ -1.51
TM9SF3-202ENST00000443638 PAGE4O60829 102 aa5.61□□□□□ -1.51
TM9SF3-202ENST00000443638 TMEM225BP0DP42 221 aa5.61□□□□□ -1.51
TM9SF3-202ENST00000443638 C6P13671 934 aa5.61□□□□□ -1.51
TM9SF3-202ENST00000443638 IGFBP2P18065 325 aa5.61□□□□□ -1.51
TM9SF3-202ENST00000443638 GABRB1P18505 474 aa5.61□□□□□ -1.51
TM9SF3-202ENST00000443638 FGFR4P22455 802 aa5.61□□□□□ -1.51
TM9SF3-202ENST00000443638 MCM3P25205 808 aa5.61□□□□□ -1.51
TM9SF3-202ENST00000443638 MGAT1P26572 445 aa5.61□□□□□ -1.51
TM9SF3-202ENST00000443638 TTKP33981 857 aa5.61□□□□□ -1.51
TM9SF3-202ENST00000443638 CPOXP36551 454 aa5.61□□□□□ -1.51
TM9SF3-202ENST00000443638 HNF4AP41235 474 aa5.61□□□□□ -1.51
TM9SF3-202ENST00000443638 MTNR1AP48039 350 aa5.61□□□□□ -1.51
TM9SF3-202ENST00000443638 CPA2P48052 419 aa5.61□□□□□ -1.51
TM9SF3-202ENST00000443638 NDUFV1P49821 464 aa5.61□□□□□ -1.51
TM9SF3-202ENST00000443638 IRAK1P51617 712 aa5.61□□□□□ -1.51
TM9SF3-202ENST00000443638 ALDH3A2P51648 485 aa5.61□□□□□ -1.51
TM9SF3-202ENST00000443638 HDAC4P56524 1084 aa5.61□□□□□ -1.51
TM9SF3-202ENST00000443638 PRAMEP78395 509 aa5.61□□□□□ -1.51
TM9SF3-202ENST00000443638 CDK18Q07002 472 aa5.61□□□□□ -1.51
TM9SF3-202ENST00000443638 EIF2B5Q13144 721 aaKnown RBP5.61□□□□□ -1.51
TM9SF3-202ENST00000443638 SMC1AQ14683 1233 aaKnown RBP5.61□□□□□ -1.51
TM9SF3-202ENST00000443638 E2F5Q15329 346 aa5.61□□□□□ -1.51
TM9SF3-202ENST00000443638 FAM187BQ17R55 369 aa5.61□□□□□ -1.51
TM9SF3-202ENST00000443638 LY6KQ17RY6 165 aa5.61□□□□□ -1.51
TM9SF3-202ENST00000443638 KRTCAP3Q53RY4 240 aa5.61□□□□□ -1.51
TM9SF3-202ENST00000443638 RUNDC3AQ59EK9 446 aa5.61□□□□□ -1.51
TM9SF3-202ENST00000443638 SH2D4BQ5SQS7 431 aa5.61□□□□□ -1.51
TM9SF3-202ENST00000443638 ZNF648Q5T619 568 aaPredicted RBP5.61□□□□□ -1.51
TM9SF3-202ENST00000443638 NAPEPLDQ6IQ20 393 aa5.61□□□□□ -1.51
TM9SF3-202ENST00000443638 FAM111BQ6SJ93 734 aa5.61□□□□□ -1.51
TM9SF3-202ENST00000443638 CCDC186Q7Z3E2 898 aa5.61□□□□□ -1.51
TM9SF3-202ENST00000443638 ARHGAP12Q8IWW6 846 aa5.61□□□□□ -1.51
TM9SF3-202ENST00000443638 CCDC170Q8IYT3 715 aa5.61□□□□□ -1.51
TM9SF3-202ENST00000443638 NUP93Q8N1F7 819 aa5.61□□□□□ -1.51
TM9SF3-202ENST00000443638 TEX9Q8N6V9 391 aa5.61□□□□□ -1.51
TM9SF3-202ENST00000443638 IL17RCQ8NAC3 791 aa5.61□□□□□ -1.51
TM9SF3-202ENST00000443638 POGLUT1Q8NBL1 392 aa5.61□□□□□ -1.51
TM9SF3-202ENST00000443638 SHCBP1Q8NEM2 672 aa5.61□□□□□ -1.51
TM9SF3-202ENST00000443638 NEK9Q8TD19 979 aa5.61□□□□□ -1.51
TM9SF3-202ENST00000443638 POMGNT1Q8WZA1 660 aa5.61□□□□□ -1.51
TM9SF3-202ENST00000443638 ST8SIA2Q92186 375 aa5.61□□□□□ -1.51
TM9SF3-202ENST00000443638 TBC1D31Q96DN5 1066 aa5.61□□□□□ -1.51
TM9SF3-202ENST00000443638 GCNAQ96QF7 691 aa5.61□□□□□ -1.51
TM9SF3-202ENST00000443638 KLHL4Q9C0H6 718 aa5.61□□□□□ -1.51
TM9SF3-202ENST00000443638 EPHX3Q9H6B9 360 aa5.61□□□□□ -1.51
TM9SF3-202ENST00000443638 OPA3Q9H6K4 179 aa5.61□□□□□ -1.51
TM9SF3-202ENST00000443638 POLR1BQ9H9Y6 1135 aa5.61□□□□□ -1.51
TM9SF3-202ENST00000443638 TEX13CA0A0J9YWL9 993 aa5.6□□□□□ -1.51
TM9SF3-202ENST00000443638 A0A1W2PRX2 142 aa5.6□□□□□ -1.51
TM9SF3-202ENST00000443638 NPIPB13A6NJU9 1138 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms