RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 BIRC7Q96CA5 298 aa21.51■■□□□ 1.03
CPNE1-219ENST00000440240 LMLNQ96KR4 655 aa21.51■■□□□ 1.03
CPNE1-219ENST00000440240 KREMEN1Q96MU8 473 aa21.51■■□□□ 1.03
CPNE1-219ENST00000440240 SRRTQ9BXP5 876 aaKnown RBP21.51■■□□□ 1.03
CPNE1-219ENST00000440240 RSPH9Q9H1X1 276 aaPredicted RBP21.51■■□□□ 1.03
CPNE1-219ENST00000440240 UBE2TQ9NPD8 197 aaPredicted RBP21.51■■□□□ 1.03
CPNE1-219ENST00000440240 CTNND2Q9UQB3 1225 aa21.51■■□□□ 1.03
CPNE1-219ENST00000440240 MOCS3O95396 460 aa21.5■■□□□ 1.03
CPNE1-219ENST00000440240 CD27P26842 260 aa21.5■■□□□ 1.03
CPNE1-219ENST00000440240 CSKP41240 450 aa21.5■■□□□ 1.03
CPNE1-219ENST00000440240 GRIA4P48058 902 aa21.5■■□□□ 1.03
CPNE1-219ENST00000440240 RPS24P62847 133 aaKnown RBP21.5■■□□□ 1.03
CPNE1-219ENST00000440240 PAK1Q13153 545 aa21.5■■□□□ 1.03
CPNE1-219ENST00000440240 ARID5BQ14865 1188 aa21.5■■□□□ 1.03
CPNE1-219ENST00000440240 USP30Q70CQ3 517 aa21.5■■□□□ 1.03
CPNE1-219ENST00000440240 CARNMT1Q8N4J0 409 aa21.5■■□□□ 1.03
CPNE1-219ENST00000440240 PRICKLE1Q96MT3 831 aaPredicted RBP21.5■■□□□ 1.03
CPNE1-219ENST00000440240 MED15Q96RN5 788 aa21.5■■□□□ 1.03
CPNE1-219ENST00000440240 CDC6Q99741 560 aa21.5■■□□□ 1.03
CPNE1-219ENST00000440240 SLC4A5Q9BY07 1137 aa21.5■■□□□ 1.03
CPNE1-219ENST00000440240 INTS2Q9H0H0 1204 aaKnown RBP21.5■■□□□ 1.03
CPNE1-219ENST00000440240 KIAA1522Q9P206 1035 aaPredicted RBP21.5■■□□□ 1.03
CPNE1-219ENST00000440240 FNDC3AQ9Y2H6 1198 aaKnown RBP21.5■■□□□ 1.03
CPNE1-219ENST00000440240 PKD1L2Q7Z442 2459 aa21.5■■□□□ 1.03
CPNE1-219ENST00000440240 CABIN1Q9Y6J0 2220 aa21.49■■□□□ 1.03
CPNE1-219ENST00000440240 NUMA1Q14980 2115 aa21.49■■□□□ 1.03
CPNE1-219ENST00000440240 FLRT2O43155 660 aa21.49■■□□□ 1.03
CPNE1-219ENST00000440240 FSBPO95073 299 aa21.49■■□□□ 1.03
CPNE1-219ENST00000440240 STX17P56962 302 aa21.49■■□□□ 1.03
CPNE1-219ENST00000440240 HNRNPA1L2Q32P51 320 aaKnown RBP21.49■■□□□ 1.03
CPNE1-219ENST00000440240 ENOSF1Q7L5Y1 443 aa21.49■■□□□ 1.03
CPNE1-219ENST00000440240 TMEM110Q86TL2 294 aa21.49■■□□□ 1.03
CPNE1-219ENST00000440240 PNPLA1Q8N8W4 532 aa21.49■■□□□ 1.03
CPNE1-219ENST00000440240 RHBDD1Q8TEB9 315 aa21.49■■□□□ 1.03
CPNE1-219ENST00000440240 GANCQ8TET4 914 aa21.49■■□□□ 1.03
CPNE1-219ENST00000440240 ZNF606Q8WXB4 792 aa21.49■■□□□ 1.03
CPNE1-219ENST00000440240 MYO19Q96H55 970 aa21.49■■□□□ 1.03
CPNE1-219ENST00000440240 FAM81BQ96LP2 452 aa21.49■■□□□ 1.03
CPNE1-219ENST00000440240 NUCKS1Q9H1E3 243 aaKnown RBP21.49■■□□□ 1.03
CPNE1-219ENST00000440240 POPDC2Q9HBU9 364 aa21.49■■□□□ 1.03
CPNE1-219ENST00000440240 TM9SF3Q9HD45 589 aa21.49■■□□□ 1.03
CPNE1-219ENST00000440240 INTS6Q9UL03 887 aaKnown RBP21.49■■□□□ 1.03
CPNE1-219ENST00000440240 ANKRD6Q9Y2G4 727 aa21.49■■□□□ 1.03
CPNE1-219ENST00000440240 GTF3C3Q9Y5Q9 886 aa21.49■■□□□ 1.03
CPNE1-219ENST00000440240 DMXL2Q8TDJ6 3036 aa21.48■■□□□ 1.03
CPNE1-219ENST00000440240 BIN1O00499 593 aa21.48■■□□□ 1.03
CPNE1-219ENST00000440240 LETM1O95202 739 aaPredicted RBP21.48■■□□□ 1.03
CPNE1-219ENST00000440240 MOCS2O96007 188 aaPredicted RBP21.48■■□□□ 1.03
CPNE1-219ENST00000440240 APOEP02649 317 aa21.48■■□□□ 1.03
CPNE1-219ENST00000440240 SRPRAP08240 638 aaKnown RBP21.48■■□□□ 1.03
CPNE1-219ENST00000440240 YWHAZP63104 245 aaKnown RBP21.48■■□□□ 1.03
CPNE1-219ENST00000440240 KIF19Q2TAC6 998 aa21.48■■□□□ 1.03
CPNE1-219ENST00000440240 DCAF6Q58WW2 860 aa21.48■■□□□ 1.03
CPNE1-219ENST00000440240 SYPL2Q5VXT5 272 aa21.48■■□□□ 1.03
CPNE1-219ENST00000440240 DENND1BQ6P3S1 775 aa21.48■■□□□ 1.03
CPNE1-219ENST00000440240 CFAP52Q8N1V2 620 aa21.48■■□□□ 1.03
CPNE1-219ENST00000440240 ADAM32Q8TC27 787 aa21.48■■□□□ 1.03
CPNE1-219ENST00000440240 BTN2A3PQ96KV6 586 aa21.48■■□□□ 1.03
CPNE1-219ENST00000440240 MRGPRX3Q96LB0 322 aa21.48■■□□□ 1.03
CPNE1-219ENST00000440240 PABPC3Q9H361 631 aaKnown RBP21.48■■□□□ 1.03
CPNE1-219ENST00000440240 MTG2Q9H4K7 406 aa21.48■■□□□ 1.03
CPNE1-219ENST00000440240 THAP9Q9H5L6 903 aa21.48■■□□□ 1.03
CPNE1-219ENST00000440240 FBXL12Q9NXK8 326 aa21.48■■□□□ 1.03
CPNE1-219ENST00000440240 TJP2Q9UDY2 1190 aa21.48■■□□□ 1.03
CPNE1-219ENST00000440240 SLC12A6Q9UHW9 1150 aa21.48■■□□□ 1.03
CPNE1-219ENST00000440240 SNX11Q9Y5W9 270 aa21.48■■□□□ 1.03
CPNE1-219ENST00000440240 WDFY3Q8IZQ1 3526 aa21.48■■□□□ 1.03
CPNE1-219ENST00000440240 ZFYVE26Q68DK2 2539 aa21.48■■□□□ 1.03
CPNE1-219ENST00000440240 CACNA1GO43497 2377 aa21.47■■□□□ 1.03
CPNE1-219ENST00000440240 ANKRD11Q6UB99 2663 aaPredicted RBP21.47■■□□□ 1.03
CPNE1-219ENST00000440240 TARSL2A2RTX5 802 aaKnown RBP21.47■■□□□ 1.03
CPNE1-219ENST00000440240 SIN3BO75182 1162 aa21.47■■□□□ 1.03
CPNE1-219ENST00000440240 LUC7L3O95232 432 aaKnown RBP21.47■■□□□ 1.03
CPNE1-219ENST00000440240 FSCBQ5H9T9 825 aa21.47■■□□□ 1.03
CPNE1-219ENST00000440240 PITRM1Q5JRX3 1037 aa21.47■■□□□ 1.03
CPNE1-219ENST00000440240 SLCO6A1Q86UG4 719 aa21.47■■□□□ 1.03
CPNE1-219ENST00000440240 TAC4Q86UU9 113 aa21.47■■□□□ 1.03
CPNE1-219ENST00000440240 MYEOVQ96EZ4 313 aa21.47■■□□□ 1.03
CPNE1-219ENST00000440240 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.47■■□□□ 1.032e-10■□□□□ 11.3
CPNE1-219ENST00000440240 ERVW-1Q9UQF0 538 aa21.47■■□□□ 1.03
CPNE1-219ENST00000440240 SLCO1B1Q9Y6L6 691 aa21.47■■□□□ 1.03
CPNE1-219ENST00000440240 PAPSS1O43252 624 aaPredicted RBP21.46■■□□□ 1.03
CPNE1-219ENST00000440240 THAP12O43422 761 aa21.46■■□□□ 1.03
CPNE1-219ENST00000440240 TRUB2O95900 331 aaKnown RBP21.46■■□□□ 1.03
CPNE1-219ENST00000440240 GNA15P30679 374 aa21.46■■□□□ 1.03
CPNE1-219ENST00000440240 ECT2LQ008S8 904 aa21.46■■□□□ 1.03
CPNE1-219ENST00000440240 ZC3H12AQ5D1E8 599 aaKnown RBP21.46■■□□□ 1.03
CPNE1-219ENST00000440240 C9orf64Q5T6V5 341 aa21.46■■□□□ 1.03
CPNE1-219ENST00000440240 RNF219Q5W0B1 726 aaPredicted RBP21.46■■□□□ 1.03
CPNE1-219ENST00000440240 KIAA0895LQ68EN5 471 aa21.46■■□□□ 1.03
CPNE1-219ENST00000440240 ADAT2Q7Z6V5 191 aaKnown RBP21.46■■□□□ 1.03
CPNE1-219ENST00000440240 DHX40Q8IX18 779 aaKnown RBP21.46■■□□□ 1.03
CPNE1-219ENST00000440240 LGI2Q8N0V4 545 aa21.46■■□□□ 1.03
CPNE1-219ENST00000440240 IGSF8Q969P0 613 aa21.46■■□□□ 1.03
CPNE1-219ENST00000440240 CEP83Q9Y592 693 aa21.46■■□□□ 1.03
CPNE1-219ENST00000440240 SPEGQ15772 3267 aa21.46■■□□□ 1.03
CPNE1-219ENST00000440240 E5RJQ4 531 aa21.45■■□□□ 1.02
CPNE1-219ENST00000440240 DFNA5O60443 496 aa21.45■■□□□ 1.02
CPNE1-219ENST00000440240 SLC2A3P11169 496 aa21.45■■□□□ 1.02
CPNE1-219ENST00000440240 TACR2P21452 398 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms