RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 SAP30LQ9HAJ7 183 aa5.67□□□□□ -1.5
HMGB3P5-201ENST00000428894 PNPLA8Q9NP80 782 aa5.67□□□□□ -1.5
HMGB3P5-201ENST00000428894 HEYLQ9NQ87 328 aaPredicted RBP5.67□□□□□ -1.5
HMGB3P5-201ENST00000428894 KIAA1210Q9ULL0 1709 aa5.67□□□□□ -1.5
HMGB3P5-201ENST00000428894 LY6G6EA0A0G2JKS1 128 aa5.66□□□□□ -1.5
HMGB3P5-201ENST00000428894 RHPN2P1A8MT19 583 aa5.66□□□□□ -1.5
HMGB3P5-201ENST00000428894 FOXN3O00409 490 aaPredicted RBP5.66□□□□□ -1.5
HMGB3P5-201ENST00000428894 THAP12O43422 761 aa5.66□□□□□ -1.5
HMGB3P5-201ENST00000428894 PQBP1O60828 265 aaKnown RBP5.66□□□□□ -1.5
HMGB3P5-201ENST00000428894 ATICP31939 592 aa5.66□□□□□ -1.5
HMGB3P5-201ENST00000428894 JAK3P52333 1124 aa5.66□□□□□ -1.5
HMGB3P5-201ENST00000428894 FOXG1P55316 489 aaPredicted RBP5.66□□□□□ -1.5
HMGB3P5-201ENST00000428894 STIM1Q13586 685 aa5.66□□□□□ -1.5
HMGB3P5-201ENST00000428894 ACOX1Q15067 660 aa5.66□□□□□ -1.5
HMGB3P5-201ENST00000428894 SLC9C1Q4G0N8 1177 aa5.66□□□□□ -1.5
HMGB3P5-201ENST00000428894 ANKRD13BQ86YJ7 626 aa5.66□□□□□ -1.5
HMGB3P5-201ENST00000428894 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.66□□□□□ -1.5
HMGB3P5-201ENST00000428894 KRT78Q8N1N4 520 aa5.66□□□□□ -1.5
HMGB3P5-201ENST00000428894 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.66□□□□□ -1.5
HMGB3P5-201ENST00000428894 SUN3Q8TAQ9 357 aa5.66□□□□□ -1.5
HMGB3P5-201ENST00000428894 UBE2Q2Q8WVN8 375 aa5.66□□□□□ -1.5
HMGB3P5-201ENST00000428894 ARL8BQ9NVJ2 186 aa5.66□□□□□ -1.5
HMGB3P5-201ENST00000428894 SEMA5BQ9P283 1151 aa5.66□□□□□ -1.5
HMGB3P5-201ENST00000428894 HEY2Q9UBP5 337 aa5.66□□□□□ -1.5
HMGB3P5-201ENST00000428894 NSD3Q9BZ95 1437 aa5.65□□□□□ -1.5
HMGB3P5-201ENST00000428894 TRIM38O00635 465 aa5.65□□□□□ -1.5
HMGB3P5-201ENST00000428894 INPPL1O15357 1258 aa5.65□□□□□ -1.5
HMGB3P5-201ENST00000428894 MBPP02686 304 aaPredicted RBP5.65□□□□□ -1.5
HMGB3P5-201ENST00000428894 PBX1P40424 430 aa5.65□□□□□ -1.5
HMGB3P5-201ENST00000428894 CPA2P48052 419 aa5.65□□□□□ -1.5
HMGB3P5-201ENST00000428894 TWIST1Q15672 202 aa5.65□□□□□ -1.5
HMGB3P5-201ENST00000428894 UBE2Q1Q7Z7E8 422 aa5.65□□□□□ -1.5
HMGB3P5-201ENST00000428894 PIP4P1Q86T03 277 aa5.65□□□□□ -1.5
HMGB3P5-201ENST00000428894 ATP11CQ8NB49 1132 aa5.65□□□□□ -1.5
HMGB3P5-201ENST00000428894 VCPIP1Q96JH7 1222 aa5.65□□□□□ -1.5
HMGB3P5-201ENST00000428894 VPS4AQ9UN37 437 aa5.65□□□□□ -1.5
HMGB3P5-201ENST00000428894 KTN1Q86UP2 1357 aaKnown RBP5.65□□□□□ -1.51
HMGB3P5-201ENST00000428894 INSIG1O15503 277 aa5.64□□□□□ -1.51
HMGB3P5-201ENST00000428894 CNOT3O75175 753 aaKnown RBP5.64□□□□□ -1.51
HMGB3P5-201ENST00000428894 CD63P08962 238 aa5.64□□□□□ -1.51
HMGB3P5-201ENST00000428894 SNHG28P0DPA3 235 aa5.64□□□□□ -1.51
HMGB3P5-201ENST00000428894 PIK3CBP42338 1070 aa5.64□□□□□ -1.51
HMGB3P5-201ENST00000428894 DGKQP52824 942 aa5.64□□□□□ -1.51
HMGB3P5-201ENST00000428894 WDR5P61964 334 aaKnown RBP5.64□□□□□ -1.51
HMGB3P5-201ENST00000428894 AASDHQ4L235 1098 aaPredicted RBP5.64□□□□□ -1.51
HMGB3P5-201ENST00000428894 EARS2Q5JPH6 523 aaKnown RBP5.64□□□□□ -1.51
HMGB3P5-201ENST00000428894 KLHDC7AQ5VTJ3 777 aa5.64□□□□□ -1.51
HMGB3P5-201ENST00000428894 FMNL3Q8IVF7 1028 aa5.64□□□□□ -1.51
HMGB3P5-201ENST00000428894 NSMCE1Q8WV22 266 aa5.64□□□□□ -1.51
HMGB3P5-201ENST00000428894 IP6K1Q92551 441 aa5.64□□□□□ -1.51
HMGB3P5-201ENST00000428894 TTC17Q96AE7 1141 aa5.64□□□□□ -1.51
HMGB3P5-201ENST00000428894 LRRC46Q96FV0 321 aa5.64□□□□□ -1.51
HMGB3P5-201ENST00000428894 TM2D2Q9BX73 214 aa5.64□□□□□ -1.51
HMGB3P5-201ENST00000428894 ZBTB26Q9HCK0 441 aa5.64□□□□□ -1.51
HMGB3P5-201ENST00000428894 POT1Q9NUX5 634 aa5.64□□□□□ -1.51
HMGB3P5-201ENST00000428894 HEMK1Q9Y5R4 338 aaPredicted RBP5.64□□□□□ -1.51
HMGB3P5-201ENST00000428894 CGNL1Q0VF96 1302 aa5.64□□□□□ -1.51
HMGB3P5-201ENST00000428894 LTN1O94822 1766 aa5.64□□□□□ -1.51
HMGB3P5-201ENST00000428894 PLEKHG2Q9H7P9 1386 aa5.64□□□□□ -1.51
HMGB3P5-201ENST00000428894 NFAT5O94916 1531 aa5.64□□□□□ -1.51
HMGB3P5-201ENST00000428894 A0A087WZ62 844 aa5.63□□□□□ -1.51
HMGB3P5-201ENST00000428894 RRHO14718 337 aa5.63□□□□□ -1.51
HMGB3P5-201ENST00000428894 AREL1O15033 823 aa5.63□□□□□ -1.51
HMGB3P5-201ENST00000428894 CCNT2O60583 730 aaKnown RBP5.63□□□□□ -1.51
HMGB3P5-201ENST00000428894 COQ9O75208 318 aa5.63□□□□□ -1.51
HMGB3P5-201ENST00000428894 PLAUP00749 431 aa5.63□□□□□ -1.51
HMGB3P5-201ENST00000428894 HSPA1AP0DMV8 641 aaKnown RBP5.63□□□□□ -1.51
HMGB3P5-201ENST00000428894 HSPA1BP0DMV9 641 aaKnown RBP5.63□□□□□ -1.51
HMGB3P5-201ENST00000428894 SCP2P22307 547 aa5.63□□□□□ -1.51
HMGB3P5-201ENST00000428894 ME1P48163 572 aa5.63□□□□□ -1.51
HMGB3P5-201ENST00000428894 LINC00205P59089 165 aa5.63□□□□□ -1.51
HMGB3P5-201ENST00000428894 ZNF543Q08ER8 600 aa5.63□□□□□ -1.51
HMGB3P5-201ENST00000428894 GPS1Q13098 491 aa5.63□□□□□ -1.51
HMGB3P5-201ENST00000428894 KCNJ12Q14500 433 aa5.63□□□□□ -1.51
HMGB3P5-201ENST00000428894 CRTC1Q6UUV9 634 aa5.63□□□□□ -1.51
HMGB3P5-201ENST00000428894 ZNF517Q6ZMY9 492 aaPredicted RBP5.63□□□□□ -1.51
HMGB3P5-201ENST00000428894 DGKHQ86XP1 1220 aa5.63□□□□□ -1.51
HMGB3P5-201ENST00000428894 ZNF548Q8NEK5 533 aaPredicted RBP5.63□□□□□ -1.51
HMGB3P5-201ENST00000428894 ABHD5Q8WTS1 349 aa5.63□□□□□ -1.51
HMGB3P5-201ENST00000428894 ZFYVE19Q96K21 471 aa5.63□□□□□ -1.51
HMGB3P5-201ENST00000428894 SCNM1Q9BWG6 230 aa5.63□□□□□ -1.51
HMGB3P5-201ENST00000428894 EBF3Q9H4W6 596 aa5.63□□□□□ -1.51
HMGB3P5-201ENST00000428894 AGO4Q9HCK5 861 aaKnown RBP5.63□□□□□ -1.51
HMGB3P5-201ENST00000428894 DDX21Q9NR30 783 aaKnown RBP eCLIP5.63□□□□□ -1.51
HMGB3P5-201ENST00000428894 KLHL42Q9P2K6 505 aa5.63□□□□□ -1.51
HMGB3P5-201ENST00000428894 PCDHB2Q9Y5E7 798 aa5.63□□□□□ -1.51
HMGB3P5-201ENST00000428894 HS3ST3B1Q9Y662 390 aa5.63□□□□□ -1.51
HMGB3P5-201ENST00000428894 C5P01031 1676 aa5.63□□□□□ -1.51
HMGB3P5-201ENST00000428894 FAM208AQ9UK61 1670 aaKnown RBP5.63□□□□□ -1.51
HMGB3P5-201ENST00000428894 TAF1LQ8IZX4 1826 aa5.62□□□□□ -1.51
HMGB3P5-201ENST00000428894 C16orf96A6NNT2 1141 aa5.62□□□□□ -1.51
HMGB3P5-201ENST00000428894 KPNA5O15131 536 aa5.62□□□□□ -1.51
HMGB3P5-201ENST00000428894 RAE1P78406 368 aaKnown RBP5.62□□□□□ -1.51
HMGB3P5-201ENST00000428894 SRSF1Q07955 248 aaKnown RBP eCLIP5.62□□□□□ -1.51
HMGB3P5-201ENST00000428894 CNGA3Q16281 694 aa5.62□□□□□ -1.51
HMGB3P5-201ENST00000428894 FAXCQ5TGI0 409 aa5.62□□□□□ -1.51
HMGB3P5-201ENST00000428894 ABLIM2Q6H8Q1 611 aa5.62□□□□□ -1.51
HMGB3P5-201ENST00000428894 ARFGAP1Q8N6T3 406 aa5.62□□□□□ -1.51
HMGB3P5-201ENST00000428894 IGFBPL1Q8WX77 278 aa5.62□□□□□ -1.51
HMGB3P5-201ENST00000428894 TRMT61AQ96FX7 289 aaKnown RBP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms