RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 TRPM8Q7Z2W7 1104 aa18.84■□□□□ 0.61
SHANK3-202ENST00000414786 DGCR6LQ9BY27 220 aa18.84■□□□□ 0.61
SHANK3-202ENST00000414786 GLIS2Q9BZE0 524 aaPredicted RBP18.84■□□□□ 0.61
SHANK3-202ENST00000414786 TAF6LQ9Y6J9 622 aa18.84■□□□□ 0.61
SHANK3-202ENST00000414786 FFAR3O14843 346 aa18.84■□□□□ 0.61
SHANK3-202ENST00000414786 GPR42O15529 346 aa18.84■□□□□ 0.61
SHANK3-202ENST00000414786 RAMP2O60895 175 aa18.84■□□□□ 0.61
SHANK3-202ENST00000414786 CDH16O75309 829 aa18.84■□□□□ 0.61
SHANK3-202ENST00000414786 TSPAN8P19075 237 aa18.84■□□□□ 0.61
SHANK3-202ENST00000414786 AQP5P55064 265 aa18.84■□□□□ 0.61
SHANK3-202ENST00000414786 ZNHIT3Q15649 155 aaPredicted RBP18.84■□□□□ 0.61
SHANK3-202ENST00000414786 FAM220AQ7Z4H9 259 aa18.84■□□□□ 0.61
SHANK3-202ENST00000414786 NEDD1Q8NHV4 660 aa18.84■□□□□ 0.61
SHANK3-202ENST00000414786 DCUN1D5Q9BTE7 237 aa18.84■□□□□ 0.61
SHANK3-202ENST00000414786 SLC27A5Q9Y2P5 690 aa18.84■□□□□ 0.61
SHANK3-202ENST00000414786 NR2E3Q9Y5X4 410 aa18.84■□□□□ 0.61
SHANK3-202ENST00000414786 ADM5C9JUS6 153 aa18.84■□□□□ 0.61
SHANK3-202ENST00000414786 SLC16A3O15427 465 aaKnown RBP18.84■□□□□ 0.61
SHANK3-202ENST00000414786 KRT6AP02538 564 aa18.84■□□□□ 0.61
SHANK3-202ENST00000414786 KRT6BP04259 564 aa18.84■□□□□ 0.61
SHANK3-202ENST00000414786 KRT6CP48668 564 aa18.84■□□□□ 0.61
SHANK3-202ENST00000414786 POU5F1Q01860 360 aaKnown RBP18.84■□□□□ 0.61
SHANK3-202ENST00000414786 ENKURQ8TC29 256 aa18.84■□□□□ 0.61
SHANK3-202ENST00000414786 EQTNQ9NQ60 294 aa18.84■□□□□ 0.61
SHANK3-202ENST00000414786 ABCA10Q8WWZ4 1543 aa18.84■□□□□ 0.61
SHANK3-202ENST00000414786 A0A075B6Q4 140 aa18.84■□□□□ 0.61
SHANK3-202ENST00000414786 SUPT20HL2P0C7V6 817 aa18.84■□□□□ 0.61
SHANK3-202ENST00000414786 NPY2RP49146 381 aa18.84■□□□□ 0.61
SHANK3-202ENST00000414786 RNF145Q96MT1 663 aa18.84■□□□□ 0.61
SHANK3-202ENST00000414786 ARL15Q9NXU5 204 aa18.84■□□□□ 0.61
SHANK3-202ENST00000414786 ZNF222Q9UK12 451 aa18.84■□□□□ 0.61
SHANK3-202ENST00000414786 OGDHLQ9ULD0 1010 aa18.84■□□□□ 0.61
SHANK3-202ENST00000414786 SDR42E2A6NKP2 422 aa18.83■□□□□ 0.61
SHANK3-202ENST00000414786 IGSF6O95976 241 aa18.83■□□□□ 0.61
SHANK3-202ENST00000414786 STX5Q13190 355 aa18.83■□□□□ 0.61
SHANK3-202ENST00000414786 MARC1Q5VT66 337 aa18.83■□□□□ 0.61
SHANK3-202ENST00000414786 SDHAF4Q5VUM1 108 aa18.83■□□□□ 0.61
SHANK3-202ENST00000414786 SLC30A10Q6XR72 485 aa18.83■□□□□ 0.61
SHANK3-202ENST00000414786 PRR23BQ6ZRT6 265 aa18.83■□□□□ 0.61
SHANK3-202ENST00000414786 CCT8L2Q96SF2 557 aa18.83■□□□□ 0.61
SHANK3-202ENST00000414786 ALDH8A1Q9H2A2 487 aaPredicted RBP18.83■□□□□ 0.61
SHANK3-202ENST00000414786 IGKV5-2P06315 115 aa18.83■□□□□ 0.61
SHANK3-202ENST00000414786 ANXA5P08758 320 aa18.83■□□□□ 0.61
SHANK3-202ENST00000414786 COILP38432 576 aaPredicted RBP18.83■□□□□ 0.61
SHANK3-202ENST00000414786 TRIM63Q969Q1 353 aa18.83■□□□□ 0.61
SHANK3-202ENST00000414786 CLCC1Q96S66 551 aa18.83■□□□□ 0.61
SHANK3-202ENST00000414786 C1QTNF7Q9BXJ2 289 aa18.83■□□□□ 0.61
SHANK3-202ENST00000414786 GSTM5P46439 218 aa18.83■□□□□ 0.6
SHANK3-202ENST00000414786 CENPCQ03188 943 aa18.83■□□□□ 0.6
SHANK3-202ENST00000414786 NBPF12Q5TAG4 269 aaPredicted RBP18.83■□□□□ 0.6
SHANK3-202ENST00000414786 RXFP2Q8WXD0 754 aa18.83■□□□□ 0.6
SHANK3-202ENST00000414786 LRRC39Q96DD0 335 aa18.83■□□□□ 0.6
SHANK3-202ENST00000414786 MRPL17Q9NRX2 175 aaKnown RBP18.83■□□□□ 0.6
SHANK3-202ENST00000414786 GPC6Q9Y625 555 aaPredicted RBP18.83■□□□□ 0.6
SHANK3-202ENST00000414786 USP12O75317 370 aa18.83■□□□□ 0.6
SHANK3-202ENST00000414786 TUBGCP4Q9UGJ1 667 aa18.83■□□□□ 0.6
SHANK3-202ENST00000414786 KIAA1257Q9ULG3 409 aa18.83■□□□□ 0.6
SHANK3-202ENST00000414786 PHTF1Q9UMS5 762 aa18.83■□□□□ 0.6
SHANK3-202ENST00000414786 RAD51BO15315 384 aa18.83■□□□□ 0.6
SHANK3-202ENST00000414786 OR7A10O76100 309 aa18.83■□□□□ 0.6
SHANK3-202ENST00000414786 RCVRNP35243 200 aa18.83■□□□□ 0.6
SHANK3-202ENST00000414786 SCUBE3Q8IX30 993 aa18.83■□□□□ 0.6
SHANK3-202ENST00000414786 FMR1NBQ8N0W7 255 aaPredicted RBP18.83■□□□□ 0.6
SHANK3-202ENST00000414786 SERPINB12Q96P63 405 aa18.83■□□□□ 0.6
SHANK3-202ENST00000414786 TBC1D3DA0A087WVF3 549 aa18.83■□□□□ 0.6
SHANK3-202ENST00000414786 TBC1D3IA0A087WXS9 549 aa18.83■□□□□ 0.6
SHANK3-202ENST00000414786 TBC1D3EA0A087X179 549 aa18.83■□□□□ 0.6
SHANK3-202ENST00000414786 TBC1D3KA0A087X1G2 549 aa18.83■□□□□ 0.6
SHANK3-202ENST00000414786 TBC1D3FA6NER0 549 aaPredicted RBP18.83■□□□□ 0.6
SHANK3-202ENST00000414786 TBC1D3LB9A6J9 549 aa18.83■□□□□ 0.6
SHANK3-202ENST00000414786 TBC1D3HP0C7X1 549 aa18.83■□□□□ 0.6
SHANK3-202ENST00000414786 MYL6P60660 151 aa18.83■□□□□ 0.6
SHANK3-202ENST00000414786 TSNQ15631 228 aaKnown RBP18.83■□□□□ 0.6
SHANK3-202ENST00000414786 TBC1D3GQ6DHY5 549 aa18.83■□□□□ 0.6
SHANK3-202ENST00000414786 TBC1D3CQ6IPX1 549 aa18.83■□□□□ 0.6
SHANK3-202ENST00000414786 SCIMPQ6UWF3 145 aa18.83■□□□□ 0.6
SHANK3-202ENST00000414786 DENND1CQ8IV53 801 aa18.83■□□□□ 0.6
SHANK3-202ENST00000414786 TBC1D3Q8IZP1 549 aaPredicted RBP18.83■□□□□ 0.6
SHANK3-202ENST00000414786 ZNF483Q8TF39 744 aaPredicted RBP18.83■□□□□ 0.6
SHANK3-202ENST00000414786 TOP1MTQ969P6 601 aa18.83■□□□□ 0.6
SHANK3-202ENST00000414786 HMX1Q9NP08 348 aaPredicted RBP18.83■□□□□ 0.6
SHANK3-202ENST00000414786 SEMA4BQ9NPR2 832 aaPredicted RBP18.83■□□□□ 0.6
SHANK3-202ENST00000414786 PRMT3O60678 531 aa18.82■□□□□ 0.6
SHANK3-202ENST00000414786 ERAL1O75616 437 aaKnown RBP18.82■□□□□ 0.6
SHANK3-202ENST00000414786 ACAD10Q6JQN1 1059 aa18.82■□□□□ 0.6
SHANK3-202ENST00000414786 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.82■□□□□ 0.6
SHANK3-202ENST00000414786 NRDE2Q9H7Z3 1164 aa18.82■□□□□ 0.6
SHANK3-202ENST00000414786 MRPS23Q9Y3D9 190 aaKnown RBP18.82■□□□□ 0.6
SHANK3-202ENST00000414786 AXIN1O15169 862 aa18.82■□□□□ 0.6
SHANK3-202ENST00000414786 SLC47A2Q86VL8 602 aa18.82■□□□□ 0.6
SHANK3-202ENST00000414786 LRRC49Q8IUZ0 686 aa18.82■□□□□ 0.6
SHANK3-202ENST00000414786 MB21D2Q8IYB1 491 aaPredicted RBP18.82■□□□□ 0.6
SHANK3-202ENST00000414786 ZNF579Q8NAF0 562 aaKnown RBP18.82■□□□□ 0.6
SHANK3-202ENST00000414786 GPER1Q99527 375 aa18.82■□□□□ 0.6
SHANK3-202ENST00000414786 TRIM9Q9C026 710 aa18.82■□□□□ 0.6
SHANK3-202ENST00000414786 C10orf88Q9H8K7 445 aa18.82■□□□□ 0.6
SHANK3-202ENST00000414786 CMTM6Q9NX76 183 aa18.82■□□□□ 0.6
SHANK3-202ENST00000414786 FAM92AA1XBS5 289 aa18.82■□□□□ 0.6
SHANK3-202ENST00000414786 NT5C1B-RDH14C9J2C7 533 aa18.82■□□□□ 0.6
SHANK3-202ENST00000414786 KCNH1O95259 989 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms