RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 SIK2Q9H0K1 926 aa17.17■□□□□ 0.34
SIPA1-201ENST00000394224 CHRAC1Q9NRG0 131 aa17.17■□□□□ 0.34
SIPA1-201ENST00000394224 SIRPGQ9P1W8 387 aa17.17■□□□□ 0.34
SIPA1-201ENST00000394224 MFSD11O43934 449 aa17.17■□□□□ 0.34
SIPA1-201ENST00000394224 PLIN3O60664 434 aa17.17■□□□□ 0.34
SIPA1-201ENST00000394224 CPOXP36551 454 aa17.17■□□□□ 0.34
SIPA1-201ENST00000394224 GEN1Q17RS7 908 aa17.17■□□□□ 0.34
SIPA1-201ENST00000394224 SOWAHAQ2M3V2 549 aa17.17■□□□□ 0.34
SIPA1-201ENST00000394224 TMEM165Q9HC07 324 aa17.17■□□□□ 0.34
SIPA1-201ENST00000394224 VCX3AQ9NNX9 186 aa17.17■□□□□ 0.34
SIPA1-201ENST00000394224 TSR3Q9UJK0 312 aaKnown RBP17.17■□□□□ 0.34
SIPA1-201ENST00000394224 A0A096LPK6 155 aa17.16■□□□□ 0.34
SIPA1-201ENST00000394224 CHADO15335 359 aa17.16■□□□□ 0.34
SIPA1-201ENST00000394224 MAGEC1O60732 1142 aa17.16■□□□□ 0.34
SIPA1-201ENST00000394224 STAMBPO95630 424 aa17.16■□□□□ 0.34
SIPA1-201ENST00000394224 MT-ND1P03886 318 aa17.16■□□□□ 0.34
SIPA1-201ENST00000394224 SLC18A1P54219 525 aa17.16■□□□□ 0.34
SIPA1-201ENST00000394224 CLDN10P78369 228 aa17.16■□□□□ 0.34
SIPA1-201ENST00000394224 TMEM132DQ14C87 1099 aa17.16■□□□□ 0.34
SIPA1-201ENST00000394224 MBLAC2Q68D91 279 aa17.16■□□□□ 0.34
SIPA1-201ENST00000394224 SLC9A4Q6AI14 798 aa17.16■□□□□ 0.34
SIPA1-201ENST00000394224 KHSRPQ92945 711 aaKnown RBP eCLIP17.16■□□□□ 0.34
SIPA1-201ENST00000394224 OPTNQ96CV9 577 aa17.16■□□□□ 0.34
SIPA1-201ENST00000394224 C7orf26Q96N11 449 aa17.16■□□□□ 0.34
SIPA1-201ENST00000394224 NT5C1AQ9BXI3 368 aa17.16■□□□□ 0.34
SIPA1-201ENST00000394224 TRPV6Q9H1D0 765 aa17.16■□□□□ 0.34
SIPA1-201ENST00000394224 SNX15Q9NRS6 342 aa17.16■□□□□ 0.34
SIPA1-201ENST00000394224 MAFBQ9Y5Q3 323 aaPredicted RBP17.16■□□□□ 0.34
SIPA1-201ENST00000394224 TGDSO95455 350 aa17.16■□□□□ 0.34
SIPA1-201ENST00000394224 P4HA1P13674 534 aa17.16■□□□□ 0.34
SIPA1-201ENST00000394224 UQCRBP14927 111 aa17.16■□□□□ 0.34
SIPA1-201ENST00000394224 C11orf91Q3C1V1 193 aa17.16■□□□□ 0.34
SIPA1-201ENST00000394224 SH2D4BQ5SQS7 431 aa17.16■□□□□ 0.34
SIPA1-201ENST00000394224 IFNEQ86WN2 208 aa17.16■□□□□ 0.34
SIPA1-201ENST00000394224 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.16■□□□□ 0.34
SIPA1-201ENST00000394224 NAT14Q8WUY8 206 aa17.16■□□□□ 0.34
SIPA1-201ENST00000394224 EME1Q96AY2 570 aa17.16■□□□□ 0.34
SIPA1-201ENST00000394224 APBA2Q99767 749 aa17.16■□□□□ 0.34
SIPA1-201ENST00000394224 UBAP1Q9NZ09 502 aa17.16■□□□□ 0.34
SIPA1-201ENST00000394224 GGA3Q9NZ52 723 aa17.16■□□□□ 0.34
SIPA1-201ENST00000394224 DTLQ9NZJ0 730 aa17.16■□□□□ 0.34
SIPA1-201ENST00000394224 SNX13Q9Y5W8 968 aa17.16■□□□□ 0.34
SIPA1-201ENST00000394224 TLL2Q9Y6L7 1015 aa17.16■□□□□ 0.34
SIPA1-201ENST00000394224 SLX4Q8IY92 1834 aa17.16■□□□□ 0.34
SIPA1-201ENST00000394224 CCL22O00626 93 aa17.16■□□□□ 0.34
SIPA1-201ENST00000394224 ARL4AP40617 200 aa17.16■□□□□ 0.34
SIPA1-201ENST00000394224 CTBP1Q13363 440 aa17.16■□□□□ 0.34
SIPA1-201ENST00000394224 MYO1HQ8N1T3 1032 aa17.16■□□□□ 0.34
SIPA1-201ENST00000394224 NAT16Q8N8M0 369 aa17.16■□□□□ 0.34
SIPA1-201ENST00000394224 HTR3CQ8WXA8 447 aa17.16■□□□□ 0.34
SIPA1-201ENST00000394224 DCUN1D1Q96GG9 259 aa17.16■□□□□ 0.34
SIPA1-201ENST00000394224 TBCBQ99426 244 aa17.16■□□□□ 0.34
SIPA1-201ENST00000394224 ZNF518BQ9C0D4 1074 aa17.16■□□□□ 0.34
SIPA1-201ENST00000394224 PRDM12Q9H4Q4 367 aa17.16■□□□□ 0.34
SIPA1-201ENST00000394224 DPP3Q9NY33 737 aa17.16■□□□□ 0.34
SIPA1-201ENST00000394224 H3BSA7 217 aa17.15■□□□□ 0.34
SIPA1-201ENST00000394224 RAP1GDS1P52306 607 aa17.15■□□□□ 0.34
SIPA1-201ENST00000394224 ABCE1P61221 599 aaKnown RBP17.15■□□□□ 0.34
SIPA1-201ENST00000394224 NADK2Q4G0N4 442 aa17.15■□□□□ 0.34
SIPA1-201ENST00000394224 HABP4Q5JVS0 413 aaKnown RBP17.15■□□□□ 0.34
SIPA1-201ENST00000394224 FAM160B1Q5W0V3 765 aa17.15■□□□□ 0.34
SIPA1-201ENST00000394224 PDSS2Q86YH6 399 aa17.15■□□□□ 0.34
SIPA1-201ENST00000394224 TRIML2Q8N7C3 387 aa17.15■□□□□ 0.34
SIPA1-201ENST00000394224 TMIGD2Q96BF3 282 aa17.15■□□□□ 0.34
SIPA1-201ENST00000394224 OTUD5Q96G74 571 aa17.15■□□□□ 0.34
SIPA1-201ENST00000394224 TCF7L2Q9NQB0 619 aa17.15■□□□□ 0.34
SIPA1-201ENST00000394224 NUDT5Q9UKK9 219 aa17.15■□□□□ 0.34
SIPA1-201ENST00000394224 CILPO75339 1184 aa17.15■□□□□ 0.34
SIPA1-201ENST00000394224 CASP2P42575 452 aa17.15■□□□□ 0.34
SIPA1-201ENST00000394224 KCTD21Q4G0X4 260 aa17.15■□□□□ 0.34
SIPA1-201ENST00000394224 ZNF534Q76KX8 674 aa17.15■□□□□ 0.34
SIPA1-201ENST00000394224 LCA5Q86VQ0 697 aa17.15■□□□□ 0.34
SIPA1-201ENST00000394224 EDEM1Q92611 657 aa17.15■□□□□ 0.34
SIPA1-201ENST00000394224 FCRL3Q96P31 734 aaPredicted RBP17.15■□□□□ 0.34
SIPA1-201ENST00000394224 SNTG2Q9NY99 539 aa17.15■□□□□ 0.34
SIPA1-201ENST00000394224 CCDC167Q9P0B6 97 aa17.15■□□□□ 0.34
SIPA1-201ENST00000394224 COPG2Q9UBF2 871 aa17.15■□□□□ 0.34
SIPA1-201ENST00000394224 ARHGAP26Q9UNA1 814 aa17.15■□□□□ 0.34
SIPA1-201ENST00000394224 FAM149AA5PLN7 773 aa17.15■□□□□ 0.34
SIPA1-201ENST00000394224 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.15■□□□□ 0.34
SIPA1-201ENST00000394224 IRF6O14896 467 aa17.15■□□□□ 0.34
SIPA1-201ENST00000394224 BUD23O43709 281 aaKnown RBP17.15■□□□□ 0.34
SIPA1-201ENST00000394224 ATG7O95352 703 aa17.15■□□□□ 0.34
SIPA1-201ENST00000394224 CLIC3O95833 236 aa17.15■□□□□ 0.34
SIPA1-201ENST00000394224 TXNP10599 105 aaKnown RBP17.15■□□□□ 0.34
SIPA1-201ENST00000394224 IGFBP6P24592 240 aaPredicted RBP17.15■□□□□ 0.34
SIPA1-201ENST00000394224 MS4A2Q01362 244 aa17.15■□□□□ 0.34
SIPA1-201ENST00000394224 SEPT6Q14141 434 aa17.15■□□□□ 0.34
SIPA1-201ENST00000394224 MAP7Q14244 749 aa17.15■□□□□ 0.34
SIPA1-201ENST00000394224 FAM47CQ5HY64 1035 aa17.15■□□□□ 0.34
SIPA1-201ENST00000394224 CYP4V2Q6ZWL3 525 aaPredicted RBP17.15■□□□□ 0.34
SIPA1-201ENST00000394224 CPNE9Q8IYJ1 553 aa17.15■□□□□ 0.34
SIPA1-201ENST00000394224 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.15■□□□□ 0.34
SIPA1-201ENST00000394224 P2RY11Q96G91 374 aa17.15■□□□□ 0.34
SIPA1-201ENST00000394224 TUBGCP4Q9UGJ1 667 aa17.15■□□□□ 0.34
SIPA1-201ENST00000394224 AP4B1Q9Y6B7 739 aa17.15■□□□□ 0.34
SIPA1-201ENST00000394224 PLSCR1O15162 318 aa17.14■□□□□ 0.33
SIPA1-201ENST00000394224 PIGNO95427 931 aa17.14■□□□□ 0.33
SIPA1-201ENST00000394224 TGM2P21980 687 aa17.14■□□□□ 0.33
SIPA1-201ENST00000394224 CRHR1P34998 444 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms