RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 TEKT5Q96M29 485 aa15.03■□□□□ -0
CCDC50-201ENST00000392455 CST11Q9H112 138 aa15.03■□□□□ -0
CCDC50-201ENST00000392455 SLC40A1Q9NP59 571 aa15.03■□□□□ -0
CCDC50-201ENST00000392455 ITGA3P26006 1051 aa15.03■□□□□ -0
CCDC50-201ENST00000392455 HNRNPH1P31943 449 aaKnown RBP15.03■□□□□ -0
CCDC50-201ENST00000392455 SORCS3Q9UPU3 1222 aa15.03■□□□□ -0
CCDC50-201ENST00000392455 RRN3P2A6NIE6 340 aa15.03■□□□□ -0
CCDC50-201ENST00000392455 STAG3L1P0CL83 205 aa15.03■□□□□ -0
CCDC50-201ENST00000392455 ATP1A4Q13733 1029 aa15.03■□□□□ -0
CCDC50-201ENST00000392455 CYB5D1Q6P9G0 228 aa15.03■□□□□ -0
CCDC50-201ENST00000392455 SPAG16Q8N0X2 631 aa15.03■□□□□ -0
CCDC50-201ENST00000392455 STK40Q8N2I9 435 aa15.03■□□□□ -0
CCDC50-201ENST00000392455 MEIOBQ8N635 442 aa15.03■□□□□ -0
CCDC50-201ENST00000392455 RRN3Q9NYV6 651 aa15.03■□□□□ -0
CCDC50-201ENST00000392455 KDM6AO15550 1401 aaPredicted RBP15.02■□□□□ -0
CCDC50-201ENST00000392455 PCNAP12004 261 aa15.02■□□□□ -0
CCDC50-201ENST00000392455 BAATQ14032 418 aaPredicted RBP15.02■□□□□ -0
CCDC50-201ENST00000392455 EMC2Q15006 297 aa15.02■□□□□ -0
CCDC50-201ENST00000392455 SMTNL2Q2TAL5 461 aa15.02■□□□□ -0
CCDC50-201ENST00000392455 AKIRIN2Q53H80 203 aa15.02■□□□□ -0
CCDC50-201ENST00000392455 MIER2Q8N344 545 aa15.02■□□□□ -0
CCDC50-201ENST00000392455 SRFBP1Q8NEF9 429 aaKnown RBP15.02■□□□□ -0
CCDC50-201ENST00000392455 NFKBIZQ9BYH8 718 aa15.02■□□□□ -0
CCDC50-201ENST00000392455 SLC24A2Q9UI40 661 aa15.02■□□□□ -0
CCDC50-201ENST00000392455 PNMA8BQ9ULN7 279 aaPredicted RBP15.02■□□□□ -0
CCDC50-201ENST00000392455 V9GYQ6 96 aa15.02■□□□□ -0
CCDC50-201ENST00000392455 PLA2G6O60733 806 aa15.02■□□□□ -0
CCDC50-201ENST00000392455 FRG1Q14331 258 aaKnown RBP15.02■□□□□ -0
CCDC50-201ENST00000392455 NAB2Q15742 525 aa15.02■□□□□ -0
CCDC50-201ENST00000392455 FAM189A2Q15884 450 aa15.02■□□□□ -0
CCDC50-201ENST00000392455 TBCELQ5QJ74 424 aa15.02■□□□□ -0
CCDC50-201ENST00000392455 UTS2BQ765I0 119 aa15.02■□□□□ -0
CCDC50-201ENST00000392455 LRRC1Q9BTT6 524 aa15.02■□□□□ -0
CCDC50-201ENST00000392455 FAM49BQ9NUQ9 324 aa15.02■□□□□ -0
CCDC50-201ENST00000392455 CHURC1-FNTBB4DL54 471 aa15.02■□□□□ -0
CCDC50-201ENST00000392455 SERPINB5P36952 375 aa15.02■□□□□ -0
CCDC50-201ENST00000392455 NR2C2P49116 596 aa15.02■□□□□ -0
CCDC50-201ENST00000392455 XKR3Q5GH77 459 aa15.02■□□□□ -0
CCDC50-201ENST00000392455 ARID3BQ8IVW6 561 aaPredicted RBP15.02■□□□□ -0
CCDC50-201ENST00000392455 ZNF669Q96BR6 464 aaPredicted RBP15.02■□□□□ -0
CCDC50-201ENST00000392455 MRTO4Q9UKD2 239 aaKnown RBP15.02■□□□□ -0
CCDC50-201ENST00000392455 A0A0G2JLW4 131 aa15.02■□□□□ -0
CCDC50-201ENST00000392455 H3BNH8 94 aa15.02■□□□□ -0
CCDC50-201ENST00000392455 S100A12P80511 92 aa15.02■□□□□ -0
CCDC50-201ENST00000392455 C11orf74Q86VG3 221 aa15.02■□□□□ -0
CCDC50-201ENST00000392455 SLC13A5Q86YT5 568 aaPredicted RBP15.02■□□□□ -0
CCDC50-201ENST00000392455 BLOC1S5Q8TDH9 187 aa15.02■□□□□ -0
CCDC50-201ENST00000392455 ENTPD7Q9NQZ7 604 aa15.02■□□□□ -0
CCDC50-201ENST00000392455 FBXO21O94952 628 aa15.02□□□□□ -0.01
CCDC50-201ENST00000392455 DNAJC3Q13217 504 aa15.02□□□□□ -0.01
CCDC50-201ENST00000392455 EIF5AL1Q6IS14 154 aaKnown RBP15.02□□□□□ -0.01
CCDC50-201ENST00000392455 MPP4Q96JB8 637 aa15.02□□□□□ -0.01
CCDC50-201ENST00000392455 PANX3Q96QZ0 392 aa15.02□□□□□ -0.01
CCDC50-201ENST00000392455 TMEM8AQ9HCN3 771 aa15.02□□□□□ -0.01
CCDC50-201ENST00000392455 DMTF1Q9Y222 760 aa15.02□□□□□ -0.01
CCDC50-201ENST00000392455 PIGBOS1A0A0B4J2F0 54 aa15.02□□□□□ -0.01
CCDC50-201ENST00000392455 ASS1P00966 412 aaKnown RBP15.02□□□□□ -0.01
CCDC50-201ENST00000392455 CSH1P0DML2 217 aa15.02□□□□□ -0.01
CCDC50-201ENST00000392455 CSH2P0DML3 217 aa15.02□□□□□ -0.01
CCDC50-201ENST00000392455 MTF1Q14872 753 aa15.02□□□□□ -0.01
CCDC50-201ENST00000392455 CYP20A1Q6UW02 462 aa15.02□□□□□ -0.01
CCDC50-201ENST00000392455 OAFQ86UD1 273 aa15.02□□□□□ -0.01
CCDC50-201ENST00000392455 TDRD5Q8NAT2 981 aaKnown RBP15.02□□□□□ -0.01
CCDC50-201ENST00000392455 MEMO1Q9Y316 297 aa15.02□□□□□ -0.01
CCDC50-201ENST00000392455 RPS6KL1Q9Y6S9 549 aa15.02□□□□□ -0.01
CCDC50-201ENST00000392455 CLTCL1P53675 1640 aa15.02□□□□□ -0.01
CCDC50-201ENST00000392455 URADA6NGE7 173 aa15.02□□□□□ -0.01
CCDC50-201ENST00000392455 NR5A2O00482 541 aa15.02□□□□□ -0.01
CCDC50-201ENST00000392455 PPIL2Q13356 520 aa15.02□□□□□ -0.01
CCDC50-201ENST00000392455 RASGRP2Q7LDG7 609 aa15.02□□□□□ -0.01
CCDC50-201ENST00000392455 TEX13BQ9BXU2 312 aa15.02□□□□□ -0.01
CCDC50-201ENST00000392455 MCUBQ9NWR8 336 aa15.02□□□□□ -0.01
CCDC50-201ENST00000392455 SHOC2Q9UQ13 582 aa15.02□□□□□ -0.01
CCDC50-201ENST00000392455 TNPO3Q9Y5L0 923 aaKnown RBP15.02□□□□□ -0.01
CCDC50-201ENST00000392455 ULK1O75385 1050 aa15.01□□□□□ -0.01
CCDC50-201ENST00000392455 IFNA6P05013 189 aa15.01□□□□□ -0.01
CCDC50-201ENST00000392455 RFX4Q33E94 735 aa15.01□□□□□ -0.01
CCDC50-201ENST00000392455 CHRDL2Q6WN34 429 aa15.01□□□□□ -0.01
CCDC50-201ENST00000392455 GSDMCQ9BYG8 508 aa15.01□□□□□ -0.01
CCDC50-201ENST00000392455 PNPLA8Q9NP80 782 aa15.01□□□□□ -0.01
CCDC50-201ENST00000392455 CASZ1Q86V15 1759 aa15.01□□□□□ -0.01
CCDC50-201ENST00000392455 C2CD2LO14523 706 aa15.01□□□□□ -0.01
CCDC50-201ENST00000392455 NUDT14O95848 222 aa15.01□□□□□ -0.01
CCDC50-201ENST00000392455 ERCC2P18074 760 aa15.01□□□□□ -0.01
CCDC50-201ENST00000392455 RRM1P23921 792 aa15.01□□□□□ -0.01
CCDC50-201ENST00000392455 PTPN4P29074 926 aa15.01□□□□□ -0.01
CCDC50-201ENST00000392455 MAPK9P45984 424 aa15.01□□□□□ -0.01
CCDC50-201ENST00000392455 ATF7IP2Q5U623 682 aa15.01□□□□□ -0.01
CCDC50-201ENST00000392455 EFCAB12Q6NXP0 572 aa15.01□□□□□ -0.01
CCDC50-201ENST00000392455 PAGE2Q7Z2X7 111 aa15.01□□□□□ -0.01
CCDC50-201ENST00000392455 GATAD2AQ86YP4 633 aa15.01□□□□□ -0.01
CCDC50-201ENST00000392455 PLCZ1Q86YW0 608 aa15.01□□□□□ -0.01
CCDC50-201ENST00000392455 NEDD1Q8NHV4 660 aa15.01□□□□□ -0.01
CCDC50-201ENST00000392455 DPY30Q9C005 99 aa15.01□□□□□ -0.01
CCDC50-201ENST00000392455 PRMT7Q9NVM4 692 aaPredicted RBP15.01□□□□□ -0.01
CCDC50-201ENST00000392455 KCNIP3Q9Y2W7 256 aa15.01□□□□□ -0.01
CCDC50-201ENST00000392455 MROH7Q68CQ1 1323 aa15.01□□□□□ -0.01
CCDC50-201ENST00000392455 SPATA31E1Q6ZUB1 1445 aa15.01□□□□□ -0.01
CCDC50-201ENST00000392455 GLP2RO95838 553 aa15.01□□□□□ -0.01
CCDC50-201ENST00000392455 TNNI3P19429 210 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms