RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 RFC1P35251 1148 aaPredicted RBP9.79□□□□□ -0.84
SF3A3-201ENST00000373019 NUDT2P50583 147 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 TUBA1BP68363 451 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 KLF10Q13118 480 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 PRKG1Q13976 671 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 LRIT3Q3SXY7 679 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 TTC39BQ5VTQ0 682 aaPredicted RBP9.79□□□□□ -0.84
SF3A3-201ENST00000373019 TUBA1AQ71U36 451 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 ARCQ7LC44 396 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 MCOLN2Q8IZK6 566 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 ZNF786Q8N393 782 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 SHC3Q92529 594 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 DLG3Q92796 817 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 CIB1Q99828 191 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 THG1LQ9NWX6 298 aaKnown RBP9.79□□□□□ -0.84
SF3A3-201ENST00000373019 DNAJC28Q9NX36 388 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 GDAP2Q9NXN4 497 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 COL4A1P02462 1669 aa9.79□□□□□ -0.84
SF3A3-201ENST00000373019 TESPA1A2RU30 521 aaPredicted RBP9.78□□□□□ -0.84
SF3A3-201ENST00000373019 GOLGA8CPA6NN73 597 aa9.78□□□□□ -0.84
SF3A3-201ENST00000373019 STX16-NPEPL1H3BU86 382 aa9.78□□□□□ -0.84
SF3A3-201ENST00000373019 EIF3DO15371 548 aaKnown RBP eCLIP9.78□□□□□ -0.84
SF3A3-201ENST00000373019 GABBR2O75899 941 aa9.78□□□□□ -0.84
SF3A3-201ENST00000373019 BBOX1O75936 387 aa9.78□□□□□ -0.84
SF3A3-201ENST00000373019 ITGAVP06756 1048 aa9.78□□□□□ -0.84
SF3A3-201ENST00000373019 WEE2P0C1S8 567 aa9.78□□□□□ -0.84
SF3A3-201ENST00000373019 FGF3P11487 239 aaPredicted RBP9.78□□□□□ -0.84
SF3A3-201ENST00000373019 CCNA2P20248 432 aa9.78□□□□□ -0.84
SF3A3-201ENST00000373019 GRK2P25098 689 aa9.78□□□□□ -0.84
SF3A3-201ENST00000373019 TTKP33981 857 aa9.78□□□□□ -0.84
SF3A3-201ENST00000373019 ELK3P41970 407 aa9.78□□□□□ -0.84
SF3A3-201ENST00000373019 QARSP47897 775 aaKnown RBP9.78□□□□□ -0.84
SF3A3-201ENST00000373019 PRAMEP78395 509 aa9.78□□□□□ -0.84
SF3A3-201ENST00000373019 ARHGEF6Q15052 776 aa9.78□□□□□ -0.84
SF3A3-201ENST00000373019 FXNQ16595 210 aa9.78□□□□□ -0.84
SF3A3-201ENST00000373019 CDONQ4KMG0 1287 aa9.78□□□□□ -0.84
SF3A3-201ENST00000373019 MTX3Q5HYI7 312 aa9.78□□□□□ -0.84
SF3A3-201ENST00000373019 CEP78Q5JTW2 689 aa9.78□□□□□ -0.84
SF3A3-201ENST00000373019 ANGEL2Q5VTE6 544 aaKnown RBP9.78□□□□□ -0.84
SF3A3-201ENST00000373019 SLC9A4Q6AI14 798 aa9.78□□□□□ -0.84
SF3A3-201ENST00000373019 STYK1Q6J9G0 422 aa9.78□□□□□ -0.84
SF3A3-201ENST00000373019 RALGPS2Q86X27 583 aaPredicted RBP9.78□□□□□ -0.84
SF3A3-201ENST00000373019 TAB3Q8N5C8 712 aaPredicted RBP9.78□□□□□ -0.84
SF3A3-201ENST00000373019 USP13Q92995 863 aaPredicted RBP9.78□□□□□ -0.84
SF3A3-201ENST00000373019 C17orf80Q9BSJ5 609 aa9.78□□□□□ -0.84
SF3A3-201ENST00000373019 MKS1Q9NXB0 559 aa9.78□□□□□ -0.84
SF3A3-201ENST00000373019 ZNF831Q5JPB2 1677 aa9.78□□□□□ -0.84
SF3A3-201ENST00000373019 MYH9P35579 1960 aaKnown RBP9.78□□□□□ -0.84
SF3A3-201ENST00000373019 KBTBD13C9JR72 458 aa9.78□□□□□ -0.84
SF3A3-201ENST00000373019 MYL4P12829 197 aa9.78□□□□□ -0.84
SF3A3-201ENST00000373019 GCLMP48507 274 aa9.78□□□□□ -0.84
SF3A3-201ENST00000373019 SLC1A6P48664 564 aa9.78□□□□□ -0.84
SF3A3-201ENST00000373019 RPS8P62241 208 aaKnown RBP9.78□□□□□ -0.84
SF3A3-201ENST00000373019 HMBOX1Q6NT76 420 aa9.78□□□□□ -0.84
SF3A3-201ENST00000373019 KCNT2Q6UVM3 1135 aa9.78□□□□□ -0.84
SF3A3-201ENST00000373019 MFSD7Q6UXD7 560 aa9.78□□□□□ -0.84
SF3A3-201ENST00000373019 PTAR1Q7Z6K3 402 aaPredicted RBP9.78□□□□□ -0.84
SF3A3-201ENST00000373019 DCP2Q8IU60 420 aaKnown RBP9.78□□□□□ -0.84
SF3A3-201ENST00000373019 ABHD11Q8NFV4 315 aa9.78□□□□□ -0.84
SF3A3-201ENST00000373019 POLR1BQ9H9Y6 1135 aa9.78□□□□□ -0.84
SF3A3-201ENST00000373019 IPO11Q9UI26 975 aaKnown RBP9.78□□□□□ -0.84
SF3A3-201ENST00000373019 IKBKGQ9Y6K9 419 aa9.78□□□□□ -0.84
SF3A3-201ENST00000373019 PCM1Q15154 2024 aa9.78□□□□□ -0.84
SF3A3-201ENST00000373019 UBR3Q6ZT12 1888 aa9.78□□□□□ -0.84
SF3A3-201ENST00000373019 ZSCAN5BA6NJL1 495 aa9.78□□□□□ -0.84
SF3A3-201ENST00000373019 SGK1O00141 431 aa9.78□□□□□ -0.84
SF3A3-201ENST00000373019 NUAK1O60285 661 aa9.78□□□□□ -0.84
SF3A3-201ENST00000373019 ALX3O95076 343 aa9.78□□□□□ -0.84
SF3A3-201ENST00000373019 POLR2IP36954 125 aaKnown RBP9.78□□□□□ -0.84
SF3A3-201ENST00000373019 BMPR2Q13873 1038 aa9.78□□□□□ -0.84
SF3A3-201ENST00000373019 UBE2UQ5VVX9 321 aa9.78□□□□□ -0.84
SF3A3-201ENST00000373019 PPP4R4Q6NUP7 873 aa9.78□□□□□ -0.84
SF3A3-201ENST00000373019 TAS2R42Q7RTR8 314 aa9.78□□□□□ -0.84
SF3A3-201ENST00000373019 SLC26A11Q86WA9 606 aa9.78□□□□□ -0.84
SF3A3-201ENST00000373019 MINDY2Q8NBR6 621 aa9.78□□□□□ -0.84
SF3A3-201ENST00000373019 FAM156AQ8NDB6 213 aa9.78□□□□□ -0.84
SF3A3-201ENST00000373019 ZSCAN18Q8TBC5 510 aaPredicted RBP9.78□□□□□ -0.84
SF3A3-201ENST00000373019 NKD2Q969F2 451 aaPredicted RBP9.78□□□□□ -0.84
SF3A3-201ENST00000373019 SLCO4A1Q96BD0 722 aa9.78□□□□□ -0.84
SF3A3-201ENST00000373019 SLITRK1Q96PX8 696 aa9.78□□□□□ -0.84
SF3A3-201ENST00000373019 SERPINI1Q99574 410 aa9.78□□□□□ -0.84
SF3A3-201ENST00000373019 SLC4A5Q9BY07 1137 aa9.78□□□□□ -0.84
SF3A3-201ENST00000373019 RMND5AQ9H871 391 aa9.78□□□□□ -0.84
SF3A3-201ENST00000373019 VRTNQ9H8Y1 702 aa9.78□□□□□ -0.84
SF3A3-201ENST00000373019 TMEM9Q9P0T7 183 aa9.78□□□□□ -0.84
SF3A3-201ENST00000373019 SEPT3Q9UH03 358 aa9.78□□□□□ -0.84
SF3A3-201ENST00000373019 TBKBP1A7MCY6 615 aa9.77□□□□□ -0.84
SF3A3-201ENST00000373019 SOCS2O14508 198 aa9.77□□□□□ -0.84
SF3A3-201ENST00000373019 PPP1R11O60927 126 aaPredicted RBP9.77□□□□□ -0.84
SF3A3-201ENST00000373019 TOM1L1O75674 476 aa9.77□□□□□ -0.84
SF3A3-201ENST00000373019 P2RX3P56373 397 aa9.77□□□□□ -0.84
SF3A3-201ENST00000373019 CHRNDQ07001 517 aa9.77□□□□□ -0.84
SF3A3-201ENST00000373019 FOXD4Q12950 439 aaPredicted RBP9.77□□□□□ -0.84
SF3A3-201ENST00000373019 STILQ15468 1287 aa9.77□□□□□ -0.84
SF3A3-201ENST00000373019 FASTKD1Q53R41 847 aaKnown RBP9.77□□□□□ -0.84
SF3A3-201ENST00000373019 TTC33Q6PID6 262 aaPredicted RBP9.77□□□□□ -0.84
SF3A3-201ENST00000373019 BNC2Q6ZN30 1099 aaPredicted RBP9.77□□□□□ -0.84
SF3A3-201ENST00000373019 LSMEM2Q8N112 164 aa9.77□□□□□ -0.84
SF3A3-201ENST00000373019 TERB1Q8NA31 727 aa9.77□□□□□ -0.84
SF3A3-201ENST00000373019 VTI1AQ96AJ9 217 aa9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms