RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 ITIH2P19823 946 aa12.44□□□□□ -0.42
USF1-203ENST00000368021 TUBP50607 506 aa12.44□□□□□ -0.42
USF1-203ENST00000368021 KPNA1P52294 538 aaPredicted RBP12.44□□□□□ -0.42
USF1-203ENST00000368021 TPI1P60174 286 aa12.44□□□□□ -0.42
USF1-203ENST00000368021 NRG1Q02297 640 aaPredicted RBP12.44□□□□□ -0.42
USF1-203ENST00000368021 RING1Q06587 406 aa12.44□□□□□ -0.42
USF1-203ENST00000368021 ACBD5Q5T8D3 534 aaPredicted RBP12.44□□□□□ -0.42
USF1-203ENST00000368021 PDE12Q6L8Q7 609 aaKnown RBP12.44□□□□□ -0.42
USF1-203ENST00000368021 NPNTQ6UXI9 565 aa12.44□□□□□ -0.42
USF1-203ENST00000368021 BBOF1Q8ND07 529 aa12.44□□□□□ -0.42
USF1-203ENST00000368021 PSMG2Q969U7 264 aa12.44□□□□□ -0.42
USF1-203ENST00000368021 SNF8Q96H20 258 aa12.44□□□□□ -0.42
USF1-203ENST00000368021 CABS1Q96KC9 395 aa12.44□□□□□ -0.42
USF1-203ENST00000368021 C1orf74Q96LT6 269 aa12.44□□□□□ -0.42
USF1-203ENST00000368021 UXTQ9UBK9 157 aaPredicted RBP12.44□□□□□ -0.42
USF1-203ENST00000368021 NUDT5Q9UKK9 219 aa12.44□□□□□ -0.42
USF1-203ENST00000368021 RAD54BQ9Y620 910 aa12.44□□□□□ -0.42
USF1-203ENST00000368021 BCLAF3A2AJT9 711 aaKnown RBP12.44□□□□□ -0.42
USF1-203ENST00000368021 FAM72CH0Y354 149 aa12.44□□□□□ -0.42
USF1-203ENST00000368021 SGK1O00141 431 aa12.44□□□□□ -0.42
USF1-203ENST00000368021 NDC80O14777 642 aa12.44□□□□□ -0.42
USF1-203ENST00000368021 TGM5O43548 720 aa12.44□□□□□ -0.42
USF1-203ENST00000368021 C1RP00736 705 aa12.44□□□□□ -0.42
USF1-203ENST00000368021 AMPD1P23109 780 aa12.44□□□□□ -0.42
USF1-203ENST00000368021 EPHB3P54753 998 aa12.44□□□□□ -0.42
USF1-203ENST00000368021 TBX4P57082 545 aa12.44□□□□□ -0.42
USF1-203ENST00000368021 CAV1Q03135 178 aa12.44□□□□□ -0.42
USF1-203ENST00000368021 EFEMP1Q12805 493 aa12.44□□□□□ -0.42
USF1-203ENST00000368021 CALCOCO2Q13137 446 aa12.44□□□□□ -0.42
USF1-203ENST00000368021 PAFAH1B3Q15102 231 aaKnown RBP12.44□□□□□ -0.42
USF1-203ENST00000368021 TRIP4Q15650 581 aaPredicted RBP12.44□□□□□ -0.42
USF1-203ENST00000368021 TAF12Q16514 161 aa12.44□□□□□ -0.42
USF1-203ENST00000368021 C10orf120Q5SQS8 335 aa12.44□□□□□ -0.42
USF1-203ENST00000368021 FAM72AQ5TYM5 149 aa12.44□□□□□ -0.42
USF1-203ENST00000368021 FAM72DQ6L9T8 149 aa12.44□□□□□ -0.42
USF1-203ENST00000368021 LILRA6Q6PI73 481 aa12.44□□□□□ -0.42
USF1-203ENST00000368021 C1orf228Q6PIY5 440 aa12.44□□□□□ -0.42
USF1-203ENST00000368021 ITIH5Q86UX2 942 aa12.44□□□□□ -0.42
USF1-203ENST00000368021 FAM72BQ86X60 149 aa12.44□□□□□ -0.42
USF1-203ENST00000368021 MREGQ8N565 214 aa12.44□□□□□ -0.42
USF1-203ENST00000368021 RSAD2Q8WXG1 361 aa12.44□□□□□ -0.42
USF1-203ENST00000368021 ART4Q93070 314 aa12.44□□□□□ -0.42
USF1-203ENST00000368021 FCRL2Q96LA5 508 aaPredicted RBP12.44□□□□□ -0.42
USF1-203ENST00000368021 ZNF512Q96ME7 567 aaPredicted RBP12.44□□□□□ -0.42
USF1-203ENST00000368021 OLFM3Q96PB7 478 aa12.44□□□□□ -0.42
USF1-203ENST00000368021 FMO2Q99518 471 aa12.44□□□□□ -0.42
USF1-203ENST00000368021 EMILIN2Q9BXX0 1053 aa12.44□□□□□ -0.42
USF1-203ENST00000368021 NEUROG2Q9H2A3 272 aa12.44□□□□□ -0.42
USF1-203ENST00000368021 UBE2ZQ9H832 354 aaPredicted RBP12.44□□□□□ -0.42
USF1-203ENST00000368021 VIPAS39Q9H9C1 493 aa12.44□□□□□ -0.42
USF1-203ENST00000368021 BATF3Q9NR55 127 aa12.44□□□□□ -0.42
USF1-203ENST00000368021 SPATS2LQ9NUQ6 558 aaKnown RBP12.44□□□□□ -0.42
USF1-203ENST00000368021 DTLQ9NZJ0 730 aa12.44□□□□□ -0.42
USF1-203ENST00000368021 MARCH2Q9P0N8 246 aa12.44□□□□□ -0.42
USF1-203ENST00000368021 ASB3Q9Y575 518 aa12.44□□□□□ -0.42
USF1-203ENST00000368021 HEY1Q9Y5J3 304 aa12.44□□□□□ -0.42
USF1-203ENST00000368021 ZNF840PA6NDX5 716 aa12.43□□□□□ -0.42
USF1-203ENST00000368021 HACD1B0YJ81 288 aa12.43□□□□□ -0.42
USF1-203ENST00000368021 PAGE1O75459 146 aa12.43□□□□□ -0.42
USF1-203ENST00000368021 ZNF189O75820 626 aaPredicted RBP12.43□□□□□ -0.42
USF1-203ENST00000368021 LRIG2O94898 1065 aa12.43□□□□□ -0.42
USF1-203ENST00000368021 IGLV3-27P01718 113 aa12.43□□□□□ -0.42
USF1-203ENST00000368021 SPATA31D3P0C874 917 aa12.43□□□□□ -0.42
USF1-203ENST00000368021 HOXC13P31276 330 aa12.43□□□□□ -0.42
USF1-203ENST00000368021 LTBRP36941 435 aa12.43□□□□□ -0.42
USF1-203ENST00000368021 ADCY8P40145 1251 aa12.43□□□□□ -0.42
USF1-203ENST00000368021 GBE1Q04446 702 aa12.43□□□□□ -0.42
USF1-203ENST00000368021 TWF1Q12792 350 aa12.43□□□□□ -0.42
USF1-203ENST00000368021 CASP8Q14790 479 aa12.43□□□□□ -0.42
USF1-203ENST00000368021 DUSP6Q16828 381 aa12.43□□□□□ -0.42
USF1-203ENST00000368021 MANEALQ5VSG8 457 aa12.43□□□□□ -0.42
USF1-203ENST00000368021 ZDHHC24Q6UX98 284 aa12.43□□□□□ -0.42
USF1-203ENST00000368021 SPATA31D4Q6ZUB0 917 aa12.43□□□□□ -0.42
USF1-203ENST00000368021 CCDC149Q6ZUS6 474 aa12.43□□□□□ -0.42
USF1-203ENST00000368021 PDZD4Q76G19 769 aaPredicted RBP12.43□□□□□ -0.42
USF1-203ENST00000368021 RTL10Q7L3V2 364 aa12.43□□□□□ -0.42
USF1-203ENST00000368021 ZC3H18Q86VM9 953 aaKnown RBP12.43□□□□□ -0.42
USF1-203ENST00000368021 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.43□□□□□ -0.42
USF1-203ENST00000368021 VN1R2Q8NFZ6 395 aa12.43□□□□□ -0.42
USF1-203ENST00000368021 FBXO25Q8TCJ0 367 aa12.43□□□□□ -0.42
USF1-203ENST00000368021 MAGEC3Q8TD91 643 aa12.43□□□□□ -0.42
USF1-203ENST00000368021 PABPC5Q96DU9 382 aaKnown RBP12.43□□□□□ -0.42
USF1-203ENST00000368021 RTP4Q96DX8 246 aa12.43□□□□□ -0.42
USF1-203ENST00000368021 KLHL5Q96PQ7 755 aa12.43□□□□□ -0.42
USF1-203ENST00000368021 APOL5Q9BWW9 433 aa12.43□□□□□ -0.42
USF1-203ENST00000368021 ETNK2Q9NVF9 386 aa12.43□□□□□ -0.42
USF1-203ENST00000368021 TRPM5Q9NZQ8 1165 aa12.43□□□□□ -0.42
USF1-203ENST00000368021 DNMT3LQ9UJW3 386 aa12.43□□□□□ -0.42
USF1-203ENST00000368021 HBS1LQ9Y450 684 aaKnown RBP12.43□□□□□ -0.42
USF1-203ENST00000368021 HCFC2Q9Y5Z7 792 aa12.43□□□□□ -0.42
USF1-203ENST00000368021 TRIOO75962 3097 aa12.43□□□□□ -0.42
USF1-203ENST00000368021 H7C0C1 242 aa12.42□□□□□ -0.42
USF1-203ENST00000368021 TP73O15350 636 aa12.42□□□□□ -0.42
USF1-203ENST00000368021 FGF10O15520 208 aaPredicted RBP12.42□□□□□ -0.42
USF1-203ENST00000368021 CLASP2O75122 1294 aaKnown RBP12.42□□□□□ -0.42
USF1-203ENST00000368021 TBX10O75333 385 aa12.42□□□□□ -0.42
USF1-203ENST00000368021 GLP2RO95838 553 aa12.42□□□□□ -0.42
USF1-203ENST00000368021 TBX18O95935 607 aa12.42□□□□□ -0.42
USF1-203ENST00000368021 APOEP02649 317 aa12.42□□□□□ -0.42
USF1-203ENST00000368021 FAM153BP0C7A2 387 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms