RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 SERPINA4P29622 427 aa6.31□□□□□ -1.4
RNU4-39P-201ENST00000362455 GKP32189 559 aa6.31□□□□□ -1.4
RNU4-39P-201ENST00000362455 TMF1P82094 1093 aa6.31□□□□□ -1.4
RNU4-39P-201ENST00000362455 DDR1Q08345 913 aa6.31□□□□□ -1.4
RNU4-39P-201ENST00000362455 TBX2Q13207 712 aaPredicted RBP6.31□□□□□ -1.4
RNU4-39P-201ENST00000362455 BFSP2Q13515 415 aa6.31□□□□□ -1.4
RNU4-39P-201ENST00000362455 KCNJ12Q14500 433 aa6.31□□□□□ -1.4
RNU4-39P-201ENST00000362455 MRGPREQ86SM8 312 aa6.31□□□□□ -1.4
RNU4-39P-201ENST00000362455 TMTC1Q8IUR5 882 aa6.31□□□□□ -1.4
RNU4-39P-201ENST00000362455 P3H2Q8IVL5 708 aa6.31□□□□□ -1.4
RNU4-39P-201ENST00000362455 PROKR1Q8TCW9 393 aa6.31□□□□□ -1.4
RNU4-39P-201ENST00000362455 RFKQ969G6 155 aa6.31□□□□□ -1.4
RNU4-39P-201ENST00000362455 CTHRC1Q96CG8 243 aa6.31□□□□□ -1.4
RNU4-39P-201ENST00000362455 MPP4Q96JB8 637 aa6.31□□□□□ -1.4
RNU4-39P-201ENST00000362455 PBKQ96KB5 322 aa6.31□□□□□ -1.4
RNU4-39P-201ENST00000362455 PPM1MQ96MI6 270 aa6.31□□□□□ -1.4
RNU4-39P-201ENST00000362455 PRR25Q96S07 402 aa6.31□□□□□ -1.4
RNU4-39P-201ENST00000362455 TMOD3Q9NYL9 352 aa6.31□□□□□ -1.4
RNU4-39P-201ENST00000362455 KCND3Q9UK17 655 aa6.31□□□□□ -1.4
RNU4-39P-201ENST00000362455 GABRQQ9UN88 632 aa6.31□□□□□ -1.4
RNU4-39P-201ENST00000362455 PCDHB7Q9Y5E2 793 aa6.31□□□□□ -1.4
RNU4-39P-201ENST00000362455 C10orf71Q711Q0 1435 aa6.31□□□□□ -1.4
RNU4-39P-201ENST00000362455 LTN1O94822 1766 aa6.31□□□□□ -1.4
RNU4-39P-201ENST00000362455 KIF24Q5T7B8 1368 aa6.31□□□□□ -1.4
RNU4-39P-201ENST00000362455 PCNTO95613 3336 aa6.3□□□□□ -1.4
RNU4-39P-201ENST00000362455 PRRT4C9JH25 899 aa6.3□□□□□ -1.4
RNU4-39P-201ENST00000362455 MPPED1O15442 326 aa6.3□□□□□ -1.4
RNU4-39P-201ENST00000362455 LARGE1O95461 756 aa6.3□□□□□ -1.4
RNU4-39P-201ENST00000362455 CREB1P16220 341 aa6.3□□□□□ -1.4
RNU4-39P-201ENST00000362455 ZFXP17010 805 aaPredicted RBP6.3□□□□□ -1.4
RNU4-39P-201ENST00000362455 CHRNA5P30532 468 aa6.3□□□□□ -1.4
RNU4-39P-201ENST00000362455 MCM5P33992 734 aa6.3□□□□□ -1.4
RNU4-39P-201ENST00000362455 FOLR3P41439 243 aa6.3□□□□□ -1.4
RNU4-39P-201ENST00000362455 CDK7P50613 346 aa6.3□□□□□ -1.4
RNU4-39P-201ENST00000362455 DGKQP52824 942 aa6.3□□□□□ -1.4
RNU4-39P-201ENST00000362455 PDE1AP54750 535 aa6.3□□□□□ -1.4
RNU4-39P-201ENST00000362455 TPTEP56180 551 aa6.3□□□□□ -1.4
RNU4-39P-201ENST00000362455 SEMA3BQ13214 749 aa6.3□□□□□ -1.4
RNU4-39P-201ENST00000362455 TUBA3CQ13748 450 aa6.3□□□□□ -1.4
RNU4-39P-201ENST00000362455 BMPR2Q13873 1038 aa6.3□□□□□ -1.4
RNU4-39P-201ENST00000362455 EIF4A2Q14240 407 aaKnown RBP6.3□□□□□ -1.4
RNU4-39P-201ENST00000362455 SMAD1Q15797 465 aaKnown RBP6.3□□□□□ -1.4
RNU4-39P-201ENST00000362455 INTS11Q5TA45 600 aaKnown RBP6.3□□□□□ -1.4
RNU4-39P-201ENST00000362455 TUBA3EQ6PEY2 450 aa6.3□□□□□ -1.4
RNU4-39P-201ENST00000362455 SYT13Q7L8C5 426 aa6.3□□□□□ -1.4
RNU4-39P-201ENST00000362455 LRRC71Q8N4P6 559 aa6.3□□□□□ -1.4
RNU4-39P-201ENST00000362455 TMEM57Q8N5G2 664 aa6.3□□□□□ -1.4
RNU4-39P-201ENST00000362455 CEP70Q8NHQ1 597 aa6.3□□□□□ -1.4
RNU4-39P-201ENST00000362455 OVCA2Q8WZ82 227 aa6.3□□□□□ -1.4
RNU4-39P-201ENST00000362455 TFAP2BQ92481 460 aa6.3□□□□□ -1.4
RNU4-39P-201ENST00000362455 VPS50Q96JG6 964 aa6.3□□□□□ -1.4
RNU4-39P-201ENST00000362455 MAELQ96JY0 434 aaKnown RBP6.3□□□□□ -1.4
RNU4-39P-201ENST00000362455 CCDC134Q9H6E4 229 aa6.3□□□□□ -1.4
RNU4-39P-201ENST00000362455 CHODLQ9H9P2 273 aa6.3□□□□□ -1.4
RNU4-39P-201ENST00000362455 C4BP0C0L5 1744 aa6.3□□□□□ -1.4
RNU4-39P-201ENST00000362455 CICQ96RK0 1608 aaPredicted RBP6.29□□□□□ -1.4
RNU4-39P-201ENST00000362455 LOC105369274A0A096LPK9 316 aa6.29□□□□□ -1.4
RNU4-39P-201ENST00000362455 LOC102723532A0A0G2JNH3 316 aa6.29□□□□□ -1.4
RNU4-39P-201ENST00000362455 SLC38A8A6NNN8 435 aa6.29□□□□□ -1.4
RNU4-39P-201ENST00000362455 M0QYT0 321 aa6.29□□□□□ -1.4
RNU4-39P-201ENST00000362455 M0QZQ0 153 aa6.29□□□□□ -1.4
RNU4-39P-201ENST00000362455 AP4M1O00189 453 aa6.29□□□□□ -1.4
RNU4-39P-201ENST00000362455 CA12O43570 354 aa6.29□□□□□ -1.4
RNU4-39P-201ENST00000362455 NR2F6P10588 404 aa6.29□□□□□ -1.4
RNU4-39P-201ENST00000362455 ALADP13716 330 aa6.29□□□□□ -1.4
RNU4-39P-201ENST00000362455 PCSK6P29122 969 aa6.29□□□□□ -1.4
RNU4-39P-201ENST00000362455 CTGFP29279 349 aa6.29□□□□□ -1.4
RNU4-39P-201ENST00000362455 TM4SF1P30408 202 aa6.29□□□□□ -1.4
RNU4-39P-201ENST00000362455 SUMO2P61956 95 aaKnown RBP6.29□□□□□ -1.4
RNU4-39P-201ENST00000362455 E2F1Q01094 437 aa6.29□□□□□ -1.4
RNU4-39P-201ENST00000362455 DEUP1Q05D60 604 aa6.29□□□□□ -1.4
RNU4-39P-201ENST00000362455 EFEMP1Q12805 493 aa6.29□□□□□ -1.4
RNU4-39P-201ENST00000362455 SLC12A1Q13621 1099 aa6.29□□□□□ -1.4
RNU4-39P-201ENST00000362455 LY6G5CQ5SRR4 150 aa6.29□□□□□ -1.4
RNU4-39P-201ENST00000362455 KIAA0895LQ68EN5 471 aa6.29□□□□□ -1.4
RNU4-39P-201ENST00000362455 ANKS1BQ7Z6G8 1248 aa6.29□□□□□ -1.4
RNU4-39P-201ENST00000362455 SMG6Q86US8 1419 aaKnown RBP6.29□□□□□ -1.4
RNU4-39P-201ENST00000362455 OR4N4Q8N0Y3 316 aa6.29□□□□□ -1.4
RNU4-39P-201ENST00000362455 ESX1Q8N693 406 aa6.29□□□□□ -1.4
RNU4-39P-201ENST00000362455 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.29□□□□□ -1.4
RNU4-39P-201ENST00000362455 WASH6PQ9NQA3 447 aa6.29□□□□□ -1.4
RNU4-39P-201ENST00000362455 RASSF1Q9NS23 344 aa6.29□□□□□ -1.4
RNU4-39P-201ENST00000362455 LIN7CQ9NUP9 197 aaKnown RBP6.29□□□□□ -1.4
RNU4-39P-201ENST00000362455 FBXO28Q9NVF7 368 aa6.29□□□□□ -1.4
RNU4-39P-201ENST00000362455 ZBTB1Q9Y2K1 713 aa6.29□□□□□ -1.4
RNU4-39P-201ENST00000362455 REXO2Q9Y3B8 237 aaKnown RBP6.29□□□□□ -1.4
RNU4-39P-201ENST00000362455 KDM6AO15550 1401 aaPredicted RBP6.28□□□□□ -1.4
RNU4-39P-201ENST00000362455 FAM90A20PA6NIJ5 464 aa6.28□□□□□ -1.4
RNU4-39P-201ENST00000362455 ERVV-2B6SEH9 535 aa6.28□□□□□ -1.4
RNU4-39P-201ENST00000362455 J3KRW8 73 aa6.28□□□□□ -1.4
RNU4-39P-201ENST00000362455 EPB41L2O43491 1005 aaKnown RBP6.28□□□□□ -1.4
RNU4-39P-201ENST00000362455 CYP21A2P08686 494 aa6.28□□□□□ -1.4
RNU4-39P-201ENST00000362455 ADRA1DP25100 572 aa6.28□□□□□ -1.4
RNU4-39P-201ENST00000362455 HMGB2P26583 209 aaKnown RBP6.28□□□□□ -1.4
RNU4-39P-201ENST00000362455 THBS4P35443 961 aa6.28□□□□□ -1.4
RNU4-39P-201ENST00000362455 DDIT3P35638 169 aa6.28□□□□□ -1.4
RNU4-39P-201ENST00000362455 CRKLP46109 303 aaKnown RBP6.28□□□□□ -1.4
RNU4-39P-201ENST00000362455 TLE2Q04725 743 aa6.28□□□□□ -1.4
RNU4-39P-201ENST00000362455 UBE3AQ05086 875 aa6.28□□□□□ -1.4
RNU4-39P-201ENST00000362455 ZNF569Q5MCW4 686 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms