RNA–Protein interactions for RNA: ENST00000326195.12

ABCF1-201, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ABCF1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-201ENST00000326195 MCOLN2Q8IZK6 566 aa10.63□□□□□ -0.71
ABCF1-201ENST00000326195 PRICKLE1Q96MT3 831 aaPredicted RBP10.63□□□□□ -0.71
ABCF1-201ENST00000326195 TOX2Q96NM4 488 aa10.63□□□□□ -0.71
ABCF1-201ENST00000326195 NDE1Q9NXR1 346 aa10.63□□□□□ -0.71
ABCF1-201ENST00000326195 SPATA7Q9P0W8 599 aa10.63□□□□□ -0.71
ABCF1-201ENST00000326195 UBQLN1Q9UMX0 589 aaKnown RBP10.63□□□□□ -0.71
ABCF1-201ENST00000326195 LRRC37A2A6NM11 1700 aa10.63□□□□□ -0.71
ABCF1-201ENST00000326195 TRIP11Q15643 1979 aa10.63□□□□□ -0.71
ABCF1-201ENST00000326195 SYNJ2BP-COX16A0A087WUM0 186 aa10.63□□□□□ -0.71
ABCF1-201ENST00000326195 ALDH2P05091 517 aa10.63□□□□□ -0.71
ABCF1-201ENST00000326195 CYP1A2P05177 515 aa10.63□□□□□ -0.71
ABCF1-201ENST00000326195 VCLP18206 1134 aa10.63□□□□□ -0.71
ABCF1-201ENST00000326195 OXCT1P55809 520 aa10.63□□□□□ -0.71
ABCF1-201ENST00000326195 SH2D4BQ5SQS7 431 aa10.63□□□□□ -0.71
ABCF1-201ENST00000326195 KLC3Q6P597 504 aa10.63□□□□□ -0.71
ABCF1-201ENST00000326195 RBM15BQ8NDT2 890 aaKnown RBP10.63□□□□□ -0.71
ABCF1-201ENST00000326195 OR6Y1Q8NGX8 325 aa10.63□□□□□ -0.71
ABCF1-201ENST00000326195 CFAP61Q8NHU2 1237 aa10.63□□□□□ -0.71
ABCF1-201ENST00000326195 LMO3Q8TAP4 145 aa10.63□□□□□ -0.71
ABCF1-201ENST00000326195 RSAD2Q8WXG1 361 aa10.63□□□□□ -0.71
ABCF1-201ENST00000326195 CFAP57Q96MR6 1250 aa10.63□□□□□ -0.71
ABCF1-201ENST00000326195 SRPK1Q96SB4 655 aaKnown RBP10.63□□□□□ -0.71
ABCF1-201ENST00000326195 SNX25Q9H3E2 840 aa10.63□□□□□ -0.71
ABCF1-201ENST00000326195 COX16Q9P0S2 106 aa10.63□□□□□ -0.71
ABCF1-201ENST00000326195 SLC7A8Q9UHI5 535 aa10.63□□□□□ -0.71
ABCF1-201ENST00000326195 ADAMTS6Q9UKP5 1117 aa10.63□□□□□ -0.71
ABCF1-201ENST00000326195 R3HDM2Q9Y2K5 976 aaKnown RBP10.63□□□□□ -0.71
ABCF1-201ENST00000326195 LOXHD1Q8IVV2 1947 aa10.62□□□□□ -0.71
ABCF1-201ENST00000326195 GOLGA8RI6L899 631 aa10.62□□□□□ -0.71
ABCF1-201ENST00000326195 TYROBPO43914 113 aa10.62□□□□□ -0.71
ABCF1-201ENST00000326195 ZWINTO95229 277 aa10.62□□□□□ -0.71
ABCF1-201ENST00000326195 CCR3P51677 355 aa10.62□□□□□ -0.71
ABCF1-201ENST00000326195 WDR5P61964 334 aaKnown RBP10.62□□□□□ -0.71
ABCF1-201ENST00000326195 GSTM4Q03013 218 aa10.62□□□□□ -0.71
ABCF1-201ENST00000326195 GPS1Q13098 491 aa10.62□□□□□ -0.71
ABCF1-201ENST00000326195 TIGD5Q53EQ6 642 aa10.62□□□□□ -0.71
ABCF1-201ENST00000326195 C9orf57Q5W0N0 161 aa10.62□□□□□ -0.71
ABCF1-201ENST00000326195 TRIM72Q6ZMU5 477 aa10.62□□□□□ -0.71
ABCF1-201ENST00000326195 TAS1R1Q7RTX1 841 aa10.62□□□□□ -0.71
ABCF1-201ENST00000326195 WDR49Q8IV35 697 aa10.62□□□□□ -0.71
ABCF1-201ENST00000326195 ARNTL2Q8WYA1 636 aa10.62□□□□□ -0.71
ABCF1-201ENST00000326195 CD101Q93033 1021 aa10.62□□□□□ -0.71
ABCF1-201ENST00000326195 SKA1Q96BD8 255 aa10.62□□□□□ -0.71
ABCF1-201ENST00000326195 SENP8Q96LD8 212 aa10.62□□□□□ -0.71
ABCF1-201ENST00000326195 FBXL18Q96ME1 805 aa10.62□□□□□ -0.71
ABCF1-201ENST00000326195 TWNKQ96RR1 684 aa10.62□□□□□ -0.71
ABCF1-201ENST00000326195 RBM15Q96T37 977 aaKnown RBP eCLIP10.62□□□□□ -0.712e-8■■■■□ 26.2
ABCF1-201ENST00000326195 KLF6Q99612 283 aaPredicted RBP10.62□□□□□ -0.71
ABCF1-201ENST00000326195 NMUR2Q9GZQ4 415 aa10.62□□□□□ -0.71
ABCF1-201ENST00000326195 BRD8Q9H0E9 1235 aa10.62□□□□□ -0.71
ABCF1-201ENST00000326195 CISHQ9NSE2 258 aa10.62□□□□□ -0.71
ABCF1-201ENST00000326195 PTTG2Q9NZH5 202 aa10.62□□□□□ -0.71
ABCF1-201ENST00000326195 IL1RAPL1Q9NZN1 696 aa10.62□□□□□ -0.71
ABCF1-201ENST00000326195 NOCTQ9UK39 431 aaKnown RBP10.62□□□□□ -0.71
ABCF1-201ENST00000326195 ANGPTL2Q9UKU9 493 aa10.62□□□□□ -0.71
ABCF1-201ENST00000326195 ACTL7BQ9Y614 415 aa10.62□□□□□ -0.71
ABCF1-201ENST00000326195 KPNA7A9QM74 516 aa10.62□□□□□ -0.71
ABCF1-201ENST00000326195 GOLGA8MH3BSY2 632 aa10.62□□□□□ -0.71
ABCF1-201ENST00000326195 SCAMP3O14828 347 aaKnown RBP10.62□□□□□ -0.71
ABCF1-201ENST00000326195 GRAP2O75791 330 aa10.62□□□□□ -0.71
ABCF1-201ENST00000326195 PIGRP01833 764 aa10.62□□□□□ -0.71
ABCF1-201ENST00000326195 TBXAS1P24557 533 aaPredicted RBP10.62□□□□□ -0.71
ABCF1-201ENST00000326195 HOXD12P35452 270 aa10.62□□□□□ -0.71
ABCF1-201ENST00000326195 GCNT1Q02742 428 aa10.62□□□□□ -0.71
ABCF1-201ENST00000326195 BTKQ06187 659 aa10.62□□□□□ -0.71
ABCF1-201ENST00000326195 HNRNPDQ14103 355 aaKnown RBP10.62□□□□□ -0.71
ABCF1-201ENST00000326195 GK3PQ14409 553 aa10.62□□□□□ -0.71
ABCF1-201ENST00000326195 ACAP1Q15027 740 aa10.62□□□□□ -0.71
ABCF1-201ENST00000326195 FAM187BQ17R55 369 aa10.62□□□□□ -0.71
ABCF1-201ENST00000326195 NADK2Q4G0N4 442 aa10.62□□□□□ -0.71
ABCF1-201ENST00000326195 SLC44A4Q53GD3 710 aa10.62□□□□□ -0.71
ABCF1-201ENST00000326195 SPDYAQ5MJ70 313 aa10.62□□□□□ -0.71
ABCF1-201ENST00000326195 ZNF697Q5TEC3 545 aa10.62□□□□□ -0.71
ABCF1-201ENST00000326195 UGT2A3Q6UWM9 527 aa10.62□□□□□ -0.71
ABCF1-201ENST00000326195 B3GNT6Q6ZMB0 384 aa10.62□□□□□ -0.71
ABCF1-201ENST00000326195 SYDE1Q6ZW31 735 aaPredicted RBP10.62□□□□□ -0.71
ABCF1-201ENST00000326195 TMEM35BQ8NCS4 154 aa10.62□□□□□ -0.71
ABCF1-201ENST00000326195 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.62□□□□□ -0.71
ABCF1-201ENST00000326195 TMEM209Q96SK2 561 aa10.62□□□□□ -0.71
ABCF1-201ENST00000326195 THTPAQ9BU02 230 aa10.62□□□□□ -0.71
ABCF1-201ENST00000326195 TMEM120AQ9BXJ8 343 aa10.62□□□□□ -0.71
ABCF1-201ENST00000326195 NFKBIZQ9BYH8 718 aa10.62□□□□□ -0.71
ABCF1-201ENST00000326195 LRRC19Q9H756 370 aa10.62□□□□□ -0.71
ABCF1-201ENST00000326195 NRDE2Q9H7Z3 1164 aa10.62□□□□□ -0.71
ABCF1-201ENST00000326195 PARVAQ9NVD7 372 aa10.62□□□□□ -0.71
ABCF1-201ENST00000326195 SLC27A5Q9Y2P5 690 aa10.62□□□□□ -0.71
ABCF1-201ENST00000326195 NRP1O14786 923 aa10.61□□□□□ -0.71
ABCF1-201ENST00000326195 PRPF4O43172 522 aaKnown RBP eCLIP10.61□□□□□ -0.71
ABCF1-201ENST00000326195 AMHP03971 560 aa10.61□□□□□ -0.71
ABCF1-201ENST00000326195 KRT10P13645 584 aa10.61□□□□□ -0.71
ABCF1-201ENST00000326195 AXLP30530 894 aa10.61□□□□□ -0.71
ABCF1-201ENST00000326195 CD97P48960 835 aa10.61□□□□□ -0.71
ABCF1-201ENST00000326195 NDST1P52848 882 aa10.61□□□□□ -0.71
ABCF1-201ENST00000326195 LILRA4P59901 499 aa10.61□□□□□ -0.71
ABCF1-201ENST00000326195 MED21Q13503 144 aa10.61□□□□□ -0.71
ABCF1-201ENST00000326195 CUL2Q13617 745 aa10.61□□□□□ -0.71
ABCF1-201ENST00000326195 MYLK3Q32MK0 819 aa10.61□□□□□ -0.71
ABCF1-201ENST00000326195 TMEM259Q4ZIN3 620 aa10.61□□□□□ -0.71
ABCF1-201ENST00000326195 ZNF677Q86XU0 584 aa10.61□□□□□ -0.71
ABCF1-201ENST00000326195 NDRG1Q92597 394 aaKnown RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms