RNA–Protein interactions for RNA: ENST00000611412.4

VPS45-212, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 5 BASIC

Gene VPS45, Length 2,064 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-212ENST00000611412 HLA-CQ95604 372 aa12.33□□□□□ -0.44
VPS45-212ENST00000611412 IGSF8Q969P0 613 aa12.33□□□□□ -0.44
VPS45-212ENST00000611412 PBKQ96KB5 322 aa12.33□□□□□ -0.44
VPS45-212ENST00000611412 CSPG4P5Q96PW8 444 aa12.33□□□□□ -0.44
VPS45-212ENST00000611412 FAM118BQ9BPY3 351 aa12.33□□□□□ -0.44
VPS45-212ENST00000611412 OSBPL8Q9BZF1 889 aa12.33□□□□□ -0.44
VPS45-212ENST00000611412 OSBPL2Q9H1P3 480 aa12.33□□□□□ -0.44
VPS45-212ENST00000611412 LINC00597Q9H2U6 94 aa12.33□□□□□ -0.44
VPS45-212ENST00000611412 ETNK2Q9NVF9 386 aa12.33□□□□□ -0.44
VPS45-212ENST00000611412 WNT6Q9Y6F9 365 aa12.33□□□□□ -0.44
VPS45-212ENST00000611412 PDE2AO00408 941 aaPredicted RBP12.32□□□□□ -0.44
VPS45-212ENST00000611412 MBTPS2O43462 519 aa12.32□□□□□ -0.44
VPS45-212ENST00000611412 MAP3K6O95382 1288 aa12.32□□□□□ -0.44
VPS45-212ENST00000611412 EPHB2P29323 1055 aa12.32□□□□□ -0.44
VPS45-212ENST00000611412 ARL4AP40617 200 aa12.32□□□□□ -0.44
VPS45-212ENST00000611412 TFF2Q03403 129 aa12.32□□□□□ -0.44
VPS45-212ENST00000611412 SEMA3BQ13214 749 aa12.32□□□□□ -0.44
VPS45-212ENST00000611412 LONRF2Q1L5Z9 754 aa12.32□□□□□ -0.44
VPS45-212ENST00000611412 TFDP3Q5H9I0 405 aa12.32□□□□□ -0.44
VPS45-212ENST00000611412 ARTNQ5T4W7 220 aa12.32□□□□□ -0.44
VPS45-212ENST00000611412 Q6ZNB5 142 aa12.32□□□□□ -0.44
VPS45-212ENST00000611412 RFX8Q6ZV50 586 aa12.32□□□□□ -0.44
VPS45-212ENST00000611412 CREG2Q8IUH2 290 aa12.32□□□□□ -0.44
VPS45-212ENST00000611412 PSTKQ8IV42 348 aaKnown RBP12.32□□□□□ -0.44
VPS45-212ENST00000611412 MAP7D3Q8IWC1 876 aa12.32□□□□□ -0.44
VPS45-212ENST00000611412 CCDC33Q8N5R6 958 aa12.32□□□□□ -0.44
VPS45-212ENST00000611412 PCDH19Q8TAB3 1148 aa12.32□□□□□ -0.44
VPS45-212ENST00000611412 FAM71BQ8TC56 605 aa12.32□□□□□ -0.44
VPS45-212ENST00000611412 TSC1Q92574 1164 aa12.32□□□□□ -0.44
VPS45-212ENST00000611412 ZFYVE19Q96K21 471 aa12.32□□□□□ -0.44
VPS45-212ENST00000611412 RPRD1AQ96P16 312 aaPredicted RBP12.32□□□□□ -0.44
VPS45-212ENST00000611412 EPAS1Q99814 870 aa12.32□□□□□ -0.44
VPS45-212ENST00000611412 PRMT1Q99873 361 aaKnown RBP12.32□□□□□ -0.44
VPS45-212ENST00000611412 GDE1Q9NZC3 331 aa12.32□□□□□ -0.44
VPS45-212ENST00000611412 SAE1Q9UBE0 346 aaPredicted RBP12.32□□□□□ -0.44
VPS45-212ENST00000611412 SOBPA7XYQ1 873 aa12.31□□□□□ -0.44
VPS45-212ENST00000611412 HEPACAM2A8MVW5 462 aa12.31□□□□□ -0.44
VPS45-212ENST00000611412 H3BRJ5 948 aa12.31□□□□□ -0.44
VPS45-212ENST00000611412 CNTN5O94779 1100 aa12.31□□□□□ -0.44
VPS45-212ENST00000611412 LAMP2P13473 410 aa12.31□□□□□ -0.44
VPS45-212ENST00000611412 PRLRP16471 622 aa12.31□□□□□ -0.44
VPS45-212ENST00000611412 FCARP24071 287 aa12.31□□□□□ -0.44
VPS45-212ENST00000611412 USP4Q13107 963 aa12.31□□□□□ -0.44
VPS45-212ENST00000611412 KCTD19Q17RG1 926 aaPredicted RBP12.31□□□□□ -0.44
VPS45-212ENST00000611412 ALFQ53S48 1182 aa12.31□□□□□ -0.44
VPS45-212ENST00000611412 CCDC181Q5TID7 509 aa12.31□□□□□ -0.44
VPS45-212ENST00000611412 TRIM68Q6AZZ1 485 aa12.31□□□□□ -0.44
VPS45-212ENST00000611412 PARM1Q6UWI2 310 aa12.31□□□□□ -0.44
VPS45-212ENST00000611412 NPNTQ6UXI9 565 aa12.31□□□□□ -0.44
VPS45-212ENST00000611412 TPGS1Q6ZTW0 290 aa12.31□□□□□ -0.44
VPS45-212ENST00000611412 HTR3DQ70Z44 454 aa12.31□□□□□ -0.44
VPS45-212ENST00000611412 CELF5Q8N6W0 485 aaKnown RBP12.31□□□□□ -0.44
VPS45-212ENST00000611412 PQLC3Q8N755 202 aa12.31□□□□□ -0.44
VPS45-212ENST00000611412 P2RY11Q96G91 374 aa12.31□□□□□ -0.44
VPS45-212ENST00000611412 PRICKLE1Q96MT3 831 aaPredicted RBP12.31□□□□□ -0.44
VPS45-212ENST00000611412 RNF157Q96PX1 679 aa12.31□□□□□ -0.44
VPS45-212ENST00000611412 KXD1Q9BQD3 176 aa12.31□□□□□ -0.44
VPS45-212ENST00000611412 ZNF670Q9BS34 389 aa12.31□□□□□ -0.44
VPS45-212ENST00000611412 AP1M1Q9BXS5 423 aa12.31□□□□□ -0.44
VPS45-212ENST00000611412 MAK16Q9BXY0 300 aaKnown RBP12.31□□□□□ -0.44
VPS45-212ENST00000611412 PLA2G2FQ9BZM2 168 aa12.31□□□□□ -0.44
VPS45-212ENST00000611412 DCLK3Q9C098 648 aa12.31□□□□□ -0.44
VPS45-212ENST00000611412 STIM2Q9P246 746 aa12.31□□□□□ -0.44
VPS45-212ENST00000611412 NEU3Q9UQ49 428 aa12.31□□□□□ -0.44
VPS45-212ENST00000611412 DENND4AQ7Z401 1863 aa12.31□□□□□ -0.44
VPS45-212ENST00000611412 NUP210Q8TEM1 1887 aaPredicted RBP12.31□□□□□ -0.44
VPS45-212ENST00000611412 F5H5T6 163 aa12.31□□□□□ -0.44
VPS45-212ENST00000611412 CST8O60676 142 aa12.31□□□□□ -0.44
VPS45-212ENST00000611412 ERCC2P18074 760 aa12.31□□□□□ -0.44
VPS45-212ENST00000611412 RPS24P62847 133 aaKnown RBP12.31□□□□□ -0.44
VPS45-212ENST00000611412 SMAD4Q13485 552 aaKnown RBP12.31□□□□□ -0.44
VPS45-212ENST00000611412 ADGRF1Q5T601 910 aa12.31□□□□□ -0.44
VPS45-212ENST00000611412 MANEALQ5VSG8 457 aa12.31□□□□□ -0.44
VPS45-212ENST00000611412 C1orf228Q6PIY5 440 aa12.31□□□□□ -0.44
VPS45-212ENST00000611412 LRRC31Q6UY01 552 aa12.31□□□□□ -0.44
VPS45-212ENST00000611412 TFAP2DQ7Z6R9 452 aa12.31□□□□□ -0.44
VPS45-212ENST00000611412 DDX42Q86XP3 938 aaKnown RBP eCLIP12.31□□□□□ -0.44
VPS45-212ENST00000611412 SLC13A5Q86YT5 568 aaPredicted RBP12.31□□□□□ -0.44
VPS45-212ENST00000611412 ZNF683Q8IZ20 524 aa12.31□□□□□ -0.44
VPS45-212ENST00000611412 ZDHHC14Q8IZN3 488 aa12.31□□□□□ -0.44
VPS45-212ENST00000611412 RASGEF1CQ8N431 466 aa12.31□□□□□ -0.44
VPS45-212ENST00000611412 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.31□□□□□ -0.44
VPS45-212ENST00000611412 LRRN4Q8WUT4 740 aa12.31□□□□□ -0.44
VPS45-212ENST00000611412 FGF14Q92915 247 aa12.31□□□□□ -0.44
VPS45-212ENST00000611412 TBC1D31Q96DN5 1066 aa12.31□□□□□ -0.44
VPS45-212ENST00000611412 C1orf74Q96LT6 269 aa12.31□□□□□ -0.44
VPS45-212ENST00000611412 NECTIN4Q96NY8 510 aa12.31□□□□□ -0.44
VPS45-212ENST00000611412 RPP25Q9BUL9 199 aaKnown RBP12.31□□□□□ -0.44
VPS45-212ENST00000611412 ARHGEF4Q9NR80 690 aa12.31□□□□□ -0.44
VPS45-212ENST00000611412 NDFIP2Q9NV92 336 aa12.31□□□□□ -0.44
VPS45-212ENST00000611412 ZMYM5Q9UJ78 669 aa12.31□□□□□ -0.44
VPS45-212ENST00000611412 CDC23Q9UJX2 597 aa12.31□□□□□ -0.44
VPS45-212ENST00000611412 NR2E1Q9Y466 385 aa12.31□□□□□ -0.44
VPS45-212ENST00000611412 MRFAP1Q9Y605 127 aa12.31□□□□□ -0.44
VPS45-212ENST00000611412 ZFP37Q9Y6Q3 630 aaPredicted RBP12.31□□□□□ -0.44
VPS45-212ENST00000611412 COL6A3P12111 3177 aa12.31□□□□□ -0.44
VPS45-212ENST00000611412 E2F8A0AVK6 867 aa12.3□□□□□ -0.44
VPS45-212ENST00000611412 CETN2P41208 172 aa12.3□□□□□ -0.44
VPS45-212ENST00000611412 DPYSQ14117 519 aa12.3□□□□□ -0.44
VPS45-212ENST00000611412 GRM2Q14416 872 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms