RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 SH3PXD2AQ5TCZ1 1133 aa20.35■□□□□ 0.85
SHKBP1-214ENST00000597396 Q6ZS52 159 aa20.35■□□□□ 0.85
SHKBP1-214ENST00000597396 CCDC117Q8IWD4 279 aaPredicted RBP20.35■□□□□ 0.85
SHKBP1-214ENST00000597396 PHTF2Q8N3S3 785 aa20.35■□□□□ 0.85
SHKBP1-214ENST00000597396 TERB1Q8NA31 727 aa20.35■□□□□ 0.85
SHKBP1-214ENST00000597396 CCDC26Q8TAB7 109 aa20.35■□□□□ 0.85
SHKBP1-214ENST00000597396 P2RY11Q96G91 374 aa20.35■□□□□ 0.85
SHKBP1-214ENST00000597396 PRICKLE1Q96MT3 831 aaPredicted RBP20.35■□□□□ 0.85
SHKBP1-214ENST00000597396 CNPY3Q9BT09 278 aa20.35■□□□□ 0.85
SHKBP1-214ENST00000597396 IER2Q9BTL4 223 aa20.35■□□□□ 0.85
SHKBP1-214ENST00000597396 SLC2A11Q9BYW1 496 aa20.35■□□□□ 0.85
SHKBP1-214ENST00000597396 PSMA2P25787 234 aa20.34■□□□□ 0.85
SHKBP1-214ENST00000597396 GALCP54803 685 aa20.34■□□□□ 0.85
SHKBP1-214ENST00000597396 SEC13P55735 322 aa20.34■□□□□ 0.85
SHKBP1-214ENST00000597396 RPS24P62847 133 aaKnown RBP20.34■□□□□ 0.85
SHKBP1-214ENST00000597396 ASTE1Q2TB18 679 aaPredicted RBP20.34■□□□□ 0.85
SHKBP1-214ENST00000597396 ARL13BQ3SXY8 428 aa20.34■□□□□ 0.85
SHKBP1-214ENST00000597396 RABGAP1LQ5R372 815 aa20.34■□□□□ 0.85
SHKBP1-214ENST00000597396 C10orf76Q5T2E6 689 aa20.34■□□□□ 0.85
SHKBP1-214ENST00000597396 MPP7Q5T2T1 576 aa20.34■□□□□ 0.85
SHKBP1-214ENST00000597396 CENPIQ92674 756 aaPredicted RBP20.34■□□□□ 0.85
SHKBP1-214ENST00000597396 EZH1Q92800 747 aaPredicted RBP20.34■□□□□ 0.85
SHKBP1-214ENST00000597396 THAP2Q9H0W7 228 aa20.34■□□□□ 0.85
SHKBP1-214ENST00000597396 FBXO10Q9UK96 956 aa20.34■□□□□ 0.85
SHKBP1-214ENST00000597396 NENFQ9UMX5 172 aa20.34■□□□□ 0.85
SHKBP1-214ENST00000597396 HS3ST4Q9Y661 456 aa20.34■□□□□ 0.85
SHKBP1-214ENST00000597396 GOLGA6L6A8MZA4 724 aa20.33■□□□□ 0.85
SHKBP1-214ENST00000597396 K7EQS6 105 aa20.33■□□□□ 0.85
SHKBP1-214ENST00000597396 CISD3P0C7P0 127 aa20.33■□□□□ 0.85
SHKBP1-214ENST00000597396 GGCXP38435 758 aa20.33■□□□□ 0.85
SHKBP1-214ENST00000597396 TNFRSF4P43489 277 aa20.33■□□□□ 0.85
SHKBP1-214ENST00000597396 MTAPQ13126 283 aa20.33■□□□□ 0.85
SHKBP1-214ENST00000597396 RAB6CQ53S08 254 aa20.33■□□□□ 0.85
SHKBP1-214ENST00000597396 SFTPA1Q8IWL2 248 aa20.33■□□□□ 0.85
SHKBP1-214ENST00000597396 CFAP52Q8N1V2 620 aa20.33■□□□□ 0.85
SHKBP1-214ENST00000597396 ZNF557Q8N988 423 aaPredicted RBP20.33■□□□□ 0.85
SHKBP1-214ENST00000597396 SPC24Q8NBT2 197 aa20.33■□□□□ 0.85
SHKBP1-214ENST00000597396 MYEOVQ96EZ4 313 aa20.33■□□□□ 0.85
SHKBP1-214ENST00000597396 RPRD1AQ96P16 312 aaPredicted RBP20.33■□□□□ 0.85
SHKBP1-214ENST00000597396 PRMT1Q99873 361 aaKnown RBP20.33■□□□□ 0.85
SHKBP1-214ENST00000597396 RAB6CQ9H0N0 254 aa20.33■□□□□ 0.85
SHKBP1-214ENST00000597396 SPTLC3Q9NUV7 552 aa20.33■□□□□ 0.85
SHKBP1-214ENST00000597396 VANGL2Q9ULK5 521 aa20.33■□□□□ 0.85
SHKBP1-214ENST00000597396 CLEC4EQ9ULY5 219 aa20.33■□□□□ 0.85
SHKBP1-214ENST00000597396 TMEM191CA6NGB0 347 aa20.32■□□□□ 0.84
SHKBP1-214ENST00000597396 LAMTOR5O43504 91 aa20.32■□□□□ 0.84
SHKBP1-214ENST00000597396 H2AFZP0C0S5 128 aa20.32■□□□□ 0.84
SHKBP1-214ENST00000597396 HDAC4P56524 1084 aa20.32■□□□□ 0.84
SHKBP1-214ENST00000597396 OGDHQ02218 1023 aa20.32■□□□□ 0.84
SHKBP1-214ENST00000597396 AUHQ13825 339 aaKnown RBP20.32■□□□□ 0.84
SHKBP1-214ENST00000597396 ACBD5Q5T8D3 534 aaPredicted RBP20.32■□□□□ 0.84
SHKBP1-214ENST00000597396 TTC39BQ5VTQ0 682 aaPredicted RBP20.32■□□□□ 0.84
SHKBP1-214ENST00000597396 FBXL22Q6P050 247 aa20.32■□□□□ 0.84
SHKBP1-214ENST00000597396 SCYL2Q6P3W7 929 aa20.32■□□□□ 0.84
SHKBP1-214ENST00000597396 H2AFVQ71UI9 128 aa20.32■□□□□ 0.84
SHKBP1-214ENST00000597396 ANKS1BQ7Z6G8 1248 aa20.32■□□□□ 0.84
SHKBP1-214ENST00000597396 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.32■□□□□ 0.84
SHKBP1-214ENST00000597396 C1orf210Q8IVY1 113 aa20.32■□□□□ 0.84
SHKBP1-214ENST00000597396 MFN1Q8IWA4 741 aa20.32■□□□□ 0.84
SHKBP1-214ENST00000597396 CARNMT1Q8N4J0 409 aa20.32■□□□□ 0.84
SHKBP1-214ENST00000597396 SPEM1Q8N4L4 309 aa20.32■□□□□ 0.84
SHKBP1-214ENST00000597396 RPLP0P6Q8NHW5 317 aa20.32■□□□□ 0.84
SHKBP1-214ENST00000597396 CTNNBL1Q8WYA6 563 aaPredicted RBP20.32■□□□□ 0.84
SHKBP1-214ENST00000597396 PANX2Q96RD6 677 aa20.32■□□□□ 0.84
SHKBP1-214ENST00000597396 HAPLN3Q96S86 360 aa20.32■□□□□ 0.84
SHKBP1-214ENST00000597396 ANLNQ9NQW6 1124 aa20.32■□□□□ 0.84
SHKBP1-214ENST00000597396 TMPRSS4Q9NRS4 437 aa20.32■□□□□ 0.84
SHKBP1-214ENST00000597396 SLC27A6Q9Y2P4 619 aa20.32■□□□□ 0.84
SHKBP1-214ENST00000597396 A0A0A0MRY4 1105 aa20.31■□□□□ 0.84
SHKBP1-214ENST00000597396 GFRA3O60609 400 aa20.31■□□□□ 0.84
SHKBP1-214ENST00000597396 ATG13O75143 517 aa20.31■□□□□ 0.84
SHKBP1-214ENST00000597396 CYP1A2P05177 515 aa20.31■□□□□ 0.84
SHKBP1-214ENST00000597396 CDH18Q13634 790 aa20.31■□□□□ 0.84
SHKBP1-214ENST00000597396 GAS6Q14393 721 aa20.31■□□□□ 0.84
SHKBP1-214ENST00000597396 C2orf27AQ580R0 203 aa20.31■□□□□ 0.84
SHKBP1-214ENST00000597396 LRRC31Q6UY01 552 aa20.31■□□□□ 0.84
SHKBP1-214ENST00000597396 FNIP1Q8TF40 1166 aa20.31■□□□□ 0.84
SHKBP1-214ENST00000597396 ARHGEF26Q96DR7 871 aa20.31■□□□□ 0.84
SHKBP1-214ENST00000597396 NUP85Q9BW27 656 aa20.31■□□□□ 0.84
SHKBP1-214ENST00000597396 IMPACTQ9P2X3 320 aa20.31■□□□□ 0.84
SHKBP1-214ENST00000597396 SNX10Q9Y5X0 201 aa20.31■□□□□ 0.84
SHKBP1-214ENST00000597396 H0Y626 953 aa20.3■□□□□ 0.84
SHKBP1-214ENST00000597396 I6L893 689 aaPredicted RBP20.3■□□□□ 0.84
SHKBP1-214ENST00000597396 RNF8O76064 485 aa20.3■□□□□ 0.84
SHKBP1-214ENST00000597396 LUC7L3O95232 432 aaKnown RBP20.3■□□□□ 0.84
SHKBP1-214ENST00000597396 ADRA1BP35368 520 aa20.3■□□□□ 0.84
SHKBP1-214ENST00000597396 TIE1P35590 1138 aa20.3■□□□□ 0.84
SHKBP1-214ENST00000597396 CCR3P51677 355 aa20.3■□□□□ 0.84
SHKBP1-214ENST00000597396 MRPS21P82921 87 aaKnown RBP20.3■□□□□ 0.84
SHKBP1-214ENST00000597396 GEN1Q17RS7 908 aa20.3■□□□□ 0.84
SHKBP1-214ENST00000597396 PKN3Q6P5Z2 889 aa20.3■□□□□ 0.84
SHKBP1-214ENST00000597396 C14orf80Q86SX3 495 aa20.3■□□□□ 0.84
SHKBP1-214ENST00000597396 CIR1Q86X95 450 aaPredicted RBP20.3■□□□□ 0.84
SHKBP1-214ENST00000597396 CCDC185Q8N715 623 aa20.3■□□□□ 0.84
SHKBP1-214ENST00000597396 WFIKKN2Q8TEU8 576 aa20.3■□□□□ 0.84
SHKBP1-214ENST00000597396 USP33Q8TEY7 942 aa20.3■□□□□ 0.84
SHKBP1-214ENST00000597396 ACDQ96AP0 544 aa20.3■□□□□ 0.84
SHKBP1-214ENST00000597396 C1orf74Q96LT6 269 aa20.3■□□□□ 0.84
SHKBP1-214ENST00000597396 PACSIN1Q9BY11 444 aa20.3■□□□□ 0.84
SHKBP1-214ENST00000597396 TRIM7Q9C029 511 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms