RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 ZNF677Q86XU0 584 aa23.13■■□□□ 1.29
GTF2F1-204ENST00000594965 CFAP52Q8N1V2 620 aa23.13■■□□□ 1.29
GTF2F1-204ENST00000594965 NEK11Q8NG66 645 aa23.13■■□□□ 1.29
GTF2F1-204ENST00000594965 FIBINQ8TAL6 211 aa23.13■■□□□ 1.29
GTF2F1-204ENST00000594965 CPA5Q8WXQ8 436 aa23.13■■□□□ 1.29
GTF2F1-204ENST00000594965 BTN2A3PQ96KV6 586 aa23.13■■□□□ 1.29
GTF2F1-204ENST00000594965 MRGPRX1Q96LB2 322 aa23.13■■□□□ 1.29
GTF2F1-204ENST00000594965 NPY6RQ99463 290 aa23.13■■□□□ 1.29
GTF2F1-204ENST00000594965 PRMT1Q99873 361 aaKnown RBP23.13■■□□□ 1.29
GTF2F1-204ENST00000594965 DDIT4Q9NX09 232 aa23.13■■□□□ 1.29
GTF2F1-204ENST00000594965 COX16Q9P0S2 106 aa23.13■■□□□ 1.29
GTF2F1-204ENST00000594965 PCDHGA5Q9Y5G8 931 aa23.13■■□□□ 1.29
GTF2F1-204ENST00000594965 DMXL1Q9Y485 3027 aa23.13■■□□□ 1.29
GTF2F1-204ENST00000594965 SPTBN4Q9H254 2564 aa23.12■■□□□ 1.29
GTF2F1-204ENST00000594965 CYP1A1P04798 512 aaPredicted RBP23.12■■□□□ 1.29
GTF2F1-204ENST00000594965 TFE3P19532 575 aaPredicted RBP23.12■■□□□ 1.29
GTF2F1-204ENST00000594965 SCNN1AP37088 669 aa23.12■■□□□ 1.29
GTF2F1-204ENST00000594965 MATKP42679 507 aa23.12■■□□□ 1.29
GTF2F1-204ENST00000594965 LMNB2Q03252 620 aa23.12■■□□□ 1.29
GTF2F1-204ENST00000594965 PTPRNQ16849 979 aa23.12■■□□□ 1.29
GTF2F1-204ENST00000594965 RSPO4Q2I0M5 234 aaPredicted RBP23.12■■□□□ 1.29
GTF2F1-204ENST00000594965 NAA35Q5VZE5 725 aa23.12■■□□□ 1.29
GTF2F1-204ENST00000594965 MFN1Q8IWA4 741 aa23.12■■□□□ 1.29
GTF2F1-204ENST00000594965 LGI2Q8N0V4 545 aa23.12■■□□□ 1.29
GTF2F1-204ENST00000594965 AHI1Q8N157 1196 aa23.12■■□□□ 1.29
GTF2F1-204ENST00000594965 ATP6V0D2Q8N8Y2 350 aa23.12■■□□□ 1.29
GTF2F1-204ENST00000594965 CYB5D2Q8WUJ1 264 aa23.12■■□□□ 1.29
GTF2F1-204ENST00000594965 PCMTD1Q96MG8 357 aaPredicted RBP23.12■■□□□ 1.29
GTF2F1-204ENST00000594965 SPAG5Q96R06 1193 aa23.12■■□□□ 1.29
GTF2F1-204ENST00000594965 NYNRINQ9P2P1 1898 aaKnown RBP23.12■■□□□ 1.29
GTF2F1-204ENST00000594965 DCHS1Q96JQ0 3298 aa23.11■■□□□ 1.29
GTF2F1-204ENST00000594965 TEX33O43247 280 aa23.11■■□□□ 1.29
GTF2F1-204ENST00000594965 ZNF806P0C7X5 589 aa23.11■■□□□ 1.29
GTF2F1-204ENST00000594965 MPLP40238 635 aa23.11■■□□□ 1.29
GTF2F1-204ENST00000594965 STAT1P42224 750 aa23.11■■□□□ 1.29
GTF2F1-204ENST00000594965 RNASE9P60153 205 aaKnown RBP23.11■■□□□ 1.29
GTF2F1-204ENST00000594965 LMAN2Q12907 356 aa23.11■■□□□ 1.29
GTF2F1-204ENST00000594965 KLHL40Q2TBA0 621 aa23.11■■□□□ 1.29
GTF2F1-204ENST00000594965 FUT11Q495W5 492 aa23.11■■□□□ 1.29
GTF2F1-204ENST00000594965 FSCBQ5H9T9 825 aa23.11■■□□□ 1.29
GTF2F1-204ENST00000594965 MBLAC2Q68D91 279 aa23.11■■□□□ 1.29
GTF2F1-204ENST00000594965 TRNP1Q6NT89 227 aa23.11■■□□□ 1.29
GTF2F1-204ENST00000594965 CHSY1Q86X52 802 aa23.11■■□□□ 1.29
GTF2F1-204ENST00000594965 CARNMT1Q8N4J0 409 aa23.11■■□□□ 1.29
GTF2F1-204ENST00000594965 NT5C3BQ969T7 300 aa23.11■■□□□ 1.29
GTF2F1-204ENST00000594965 SPACA7Q96KW9 195 aa23.11■■□□□ 1.29
GTF2F1-204ENST00000594965 SMOC1Q9H4F8 434 aa23.11■■□□□ 1.29
GTF2F1-204ENST00000594965 CD93Q9NPY3 652 aa23.11■■□□□ 1.29
GTF2F1-204ENST00000594965 DLL3Q9NYJ7 618 aa23.11■■□□□ 1.29
GTF2F1-204ENST00000594965 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.11■■□□□ 1.29
GTF2F1-204ENST00000594965 INTS6Q9UL03 887 aaKnown RBP23.11■■□□□ 1.29
GTF2F1-204ENST00000594965 BCLAF3A2AJT9 711 aaKnown RBP23.1■■□□□ 1.29
GTF2F1-204ENST00000594965 M0QYT0 321 aa23.1■■□□□ 1.29
GTF2F1-204ENST00000594965 LUC7L3O95232 432 aaKnown RBP23.1■■□□□ 1.29
GTF2F1-204ENST00000594965 SLC2A3P11169 496 aa23.1■■□□□ 1.29
GTF2F1-204ENST00000594965 HLA-EP13747 358 aa23.1■■□□□ 1.29
GTF2F1-204ENST00000594965 CCR1P32246 355 aa23.1■■□□□ 1.29
GTF2F1-204ENST00000594965 ZNF165P49910 485 aa23.1■■□□□ 1.29
GTF2F1-204ENST00000594965 CREB5Q02930 508 aa23.1■■□□□ 1.29
GTF2F1-204ENST00000594965 NME3Q13232 169 aa23.1■■□□□ 1.29
GTF2F1-204ENST00000594965 BYSLQ13895 437 aaKnown RBP23.1■■□□□ 1.29
GTF2F1-204ENST00000594965 IQCB1Q15051 598 aa23.1■■□□□ 1.29
GTF2F1-204ENST00000594965 SF3A2Q15428 464 aaKnown RBP23.1■■□□□ 1.29
GTF2F1-204ENST00000594965 FAM102AQ5T9C2 384 aaPredicted RBP23.1■■□□□ 1.29
GTF2F1-204ENST00000594965 PCDHB18PQ96TA0 734 aa23.1■■□□□ 1.29
GTF2F1-204ENST00000594965 MKRN2Q9H000 416 aaKnown RBP23.1■■□□□ 1.29
GTF2F1-204ENST00000594965 TMEM245Q9H330 911 aa23.1■■□□□ 1.29
GTF2F1-204ENST00000594965 TMEM59LQ9UK28 342 aa23.1■■□□□ 1.29
GTF2F1-204ENST00000594965 DOCK4Q8N1I0 1966 aa23.09■■□□□ 1.29
GTF2F1-204ENST00000594965 IGHV1OR15-9A0A0B4J2B8 117 aa23.09■■□□□ 1.29
GTF2F1-204ENST00000594965 TYW5A2RUC4 315 aaKnown RBP23.09■■□□□ 1.29
GTF2F1-204ENST00000594965 SMTNL1A8MU46 457 aa23.09■■□□□ 1.29
GTF2F1-204ENST00000594965 PRR5-ARHGAP8B1AHC4 643 aa23.09■■□□□ 1.29
GTF2F1-204ENST00000594965 FLT3P36888 993 aa23.09■■□□□ 1.29
GTF2F1-204ENST00000594965 COPAP53621 1224 aa23.09■■□□□ 1.29
GTF2F1-204ENST00000594965 ARHGAP8P85298 464 aa23.09■■□□□ 1.29
GTF2F1-204ENST00000594965 STARD3Q14849 445 aa23.09■■□□□ 1.29
GTF2F1-204ENST00000594965 E2F5Q15329 346 aa23.09■■□□□ 1.29
GTF2F1-204ENST00000594965 MMS22LQ6ZRQ5 1243 aa23.09■■□□□ 1.29
GTF2F1-204ENST00000594965 RTN4Q9NQC3 1192 aaKnown RBP23.09■■□□□ 1.29
GTF2F1-204ENST00000594965 ANLNQ9NQW6 1124 aa23.09■■□□□ 1.29
GTF2F1-204ENST00000594965 PIGVQ9NUD9 493 aa23.09■■□□□ 1.29
GTF2F1-204ENST00000594965 RRN3Q9NYV6 651 aa23.09■■□□□ 1.29
GTF2F1-204ENST00000594965 SLC12A6Q9UHW9 1150 aa23.09■■□□□ 1.29
GTF2F1-204ENST00000594965 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa23.08■■□□□ 1.29
GTF2F1-204ENST00000594965 SYCE3A1L190 88 aa23.08■■□□□ 1.29
GTF2F1-204ENST00000594965 F5H5T6 163 aa23.08■■□□□ 1.29
GTF2F1-204ENST00000594965 GOLGA8SH3BPF8 625 aa23.08■■□□□ 1.29
GTF2F1-204ENST00000594965 I6L893 689 aaPredicted RBP23.08■■□□□ 1.29
GTF2F1-204ENST00000594965 GDF9O60383 454 aa23.08■■□□□ 1.29
GTF2F1-204ENST00000594965 EPHX1P07099 455 aa23.08■■□□□ 1.29
GTF2F1-204ENST00000594965 UNGP13051 313 aaPredicted RBP23.08■■□□□ 1.29
GTF2F1-204ENST00000594965 ABCB4P21439 1286 aa23.08■■□□□ 1.29
GTF2F1-204ENST00000594965 SULT1E1P49888 294 aa23.08■■□□□ 1.29
GTF2F1-204ENST00000594965 ARID5AQ03989 594 aa23.08■■□□□ 1.29
GTF2F1-204ENST00000594965 FBXL22Q6P050 247 aa23.08■■□□□ 1.29
GTF2F1-204ENST00000594965 SERPINA13PQ6UXR4 307 aa23.08■■□□□ 1.29
GTF2F1-204ENST00000594965 TMEFF1Q8IYR6 380 aa23.08■■□□□ 1.29
GTF2F1-204ENST00000594965 ZNF366Q8N895 744 aa23.08■■□□□ 1.29
GTF2F1-204ENST00000594965 ZNF557Q8N988 423 aaPredicted RBP23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms