RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 MPP7Q5T2T1 576 aa17.23■□□□□ 0.35
SREBF1-219ENST00000580540 FAM102AQ5T9C2 384 aaPredicted RBP17.23■□□□□ 0.35
SREBF1-219ENST00000580540 SERPINA13PQ6UXR4 307 aa17.23■□□□□ 0.35
SREBF1-219ENST00000580540 SLC26A9Q7LBE3 791 aa17.23■□□□□ 0.35
SREBF1-219ENST00000580540 DHX40Q8IX18 779 aaKnown RBP17.23■□□□□ 0.35
SREBF1-219ENST00000580540 RMDN1Q96DB5 314 aa17.23■□□□□ 0.35
SREBF1-219ENST00000580540 IRX2Q9BZI1 471 aaPredicted RBP17.23■□□□□ 0.35
SREBF1-219ENST00000580540 SMOC1Q9H4F8 434 aa17.23■□□□□ 0.35
SREBF1-219ENST00000580540 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.23■□□□□ 0.35
SREBF1-219ENST00000580540 PLA2G4CQ9UP65 541 aa17.23■□□□□ 0.35
SREBF1-219ENST00000580540 SPTBN4Q9H254 2564 aa17.22■□□□□ 0.35
SREBF1-219ENST00000580540 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.22■□□□□ 0.35
SREBF1-219ENST00000580540 KCNU1A8MYU2 1149 aa17.22■□□□□ 0.35
SREBF1-219ENST00000580540 F5H5T6 163 aa17.22■□□□□ 0.35
SREBF1-219ENST00000580540 H0Y626 953 aa17.22■□□□□ 0.35
SREBF1-219ENST00000580540 LSM8O95777 96 aaKnown RBP17.22■□□□□ 0.35
SREBF1-219ENST00000580540 EPHX1P07099 455 aa17.22■□□□□ 0.35
SREBF1-219ENST00000580540 HLA-EP13747 358 aa17.22■□□□□ 0.35
SREBF1-219ENST00000580540 POLR2EP19388 210 aaKnown RBP17.22■□□□□ 0.35
SREBF1-219ENST00000580540 MPLP40238 635 aa17.22■□□□□ 0.35
SREBF1-219ENST00000580540 SULT1E1P49888 294 aa17.22■□□□□ 0.35
SREBF1-219ENST00000580540 ZNF165P49910 485 aa17.22■□□□□ 0.35
SREBF1-219ENST00000580540 CDR2Q01850 454 aa17.22■□□□□ 0.35
SREBF1-219ENST00000580540 CDH18Q13634 790 aa17.22■□□□□ 0.35
SREBF1-219ENST00000580540 SF3A2Q15428 464 aaKnown RBP17.22■□□□□ 0.35
SREBF1-219ENST00000580540 MAP7D1Q3KQU3 841 aa17.22■□□□□ 0.35
SREBF1-219ENST00000580540 PMS2CLQ68D20 193 aa17.22■□□□□ 0.35
SREBF1-219ENST00000580540 MBLAC2Q68D91 279 aa17.22■□□□□ 0.35
SREBF1-219ENST00000580540 PRR23CQ6ZRP0 262 aa17.22■□□□□ 0.35
SREBF1-219ENST00000580540 ARMCX6Q7L4S7 300 aa17.22■□□□□ 0.35
SREBF1-219ENST00000580540 LPCAT2Q7L5N7 544 aa17.22■□□□□ 0.35
SREBF1-219ENST00000580540 APTXQ7Z2E3 356 aaKnown RBP17.22■□□□□ 0.35
SREBF1-219ENST00000580540 PHLDB2Q86SQ0 1253 aa17.22■□□□□ 0.35
SREBF1-219ENST00000580540 ZNF677Q86XU0 584 aa17.22■□□□□ 0.35
SREBF1-219ENST00000580540 XYLT1Q86Y38 959 aa17.22■□□□□ 0.35
SREBF1-219ENST00000580540 TMEFF1Q8IYR6 380 aa17.22■□□□□ 0.35
SREBF1-219ENST00000580540 AHI1Q8N157 1196 aa17.22■□□□□ 0.35
SREBF1-219ENST00000580540 DEFB119Q8N690 84 aa17.22■□□□□ 0.35
SREBF1-219ENST00000580540 C12orf50Q8NA57 414 aaPredicted RBP17.22■□□□□ 0.35
SREBF1-219ENST00000580540 ZNF397Q8NF99 534 aaPredicted RBP17.22■□□□□ 0.35
SREBF1-219ENST00000580540 ERGIC2Q96RQ1 377 aa17.22■□□□□ 0.35
SREBF1-219ENST00000580540 BPIFA3Q9BQP9 254 aa17.22■□□□□ 0.35
SREBF1-219ENST00000580540 SEPT11Q9NVA2 429 aaKnown RBP17.22■□□□□ 0.35
SREBF1-219ENST00000580540 MBD1Q9UIS9 605 aaPredicted RBP17.22■□□□□ 0.35
SREBF1-219ENST00000580540 NOCTQ9UK39 431 aaKnown RBP17.22■□□□□ 0.35
SREBF1-219ENST00000580540 CYP8B1Q9UNU6 501 aa17.22■□□□□ 0.35
SREBF1-219ENST00000580540 DAAM1Q9Y4D1 1078 aa17.22■□□□□ 0.35
SREBF1-219ENST00000580540 THADAQ6YHU6 1953 aa17.22■□□□□ 0.35
SREBF1-219ENST00000580540 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.21■□□□□ 0.35
SREBF1-219ENST00000580540 SYCE3A1L190 88 aa17.21■□□□□ 0.35
SREBF1-219ENST00000580540 PRR5-ARHGAP8B1AHC4 643 aa17.21■□□□□ 0.35
SREBF1-219ENST00000580540 TEX33O43247 280 aa17.21■□□□□ 0.35
SREBF1-219ENST00000580540 ATP5BP06576 529 aaKnown RBP17.21■□□□□ 0.35
SREBF1-219ENST00000580540 CHRNB2P17787 502 aa17.21■□□□□ 0.35
SREBF1-219ENST00000580540 PRKCHP24723 683 aa17.21■□□□□ 0.35
SREBF1-219ENST00000580540 MATKP42679 507 aa17.21■□□□□ 0.35
SREBF1-219ENST00000580540 GABRB2P47870 512 aa17.21■□□□□ 0.35
SREBF1-219ENST00000580540 NOMO3P69849 1222 aa17.21■□□□□ 0.35
SREBF1-219ENST00000580540 ARHGAP8P85298 464 aa17.21■□□□□ 0.35
SREBF1-219ENST00000580540 LMAN2Q12907 356 aa17.21■□□□□ 0.35
SREBF1-219ENST00000580540 FUT11Q495W5 492 aa17.21■□□□□ 0.35
SREBF1-219ENST00000580540 AASDHQ4L235 1098 aaPredicted RBP17.21■□□□□ 0.35
SREBF1-219ENST00000580540 SND1Q7KZF4 910 aaKnown RBP eCLIP17.21■□□□□ 0.35
SREBF1-219ENST00000580540 ADIPOR2Q86V24 386 aa17.21■□□□□ 0.35
SREBF1-219ENST00000580540 CACUL1Q86Y37 369 aa17.21■□□□□ 0.35
SREBF1-219ENST00000580540 ZNF366Q8N895 744 aa17.21■□□□□ 0.35
SREBF1-219ENST00000580540 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.21■□□□□ 0.35
SREBF1-219ENST00000580540 ZNF557Q8N988 423 aaPredicted RBP17.21■□□□□ 0.35
SREBF1-219ENST00000580540 FIBINQ8TAL6 211 aa17.21■□□□□ 0.35
SREBF1-219ENST00000580540 MRGPRX1Q96LB2 322 aa17.21■□□□□ 0.35
SREBF1-219ENST00000580540 CDV3Q9UKY7 258 aaKnown RBP17.21■□□□□ 0.35
SREBF1-219ENST00000580540 STAP1Q9ULZ2 295 aa17.21■□□□□ 0.35
SREBF1-219ENST00000580540 PCDHGA5Q9Y5G8 931 aa17.21■□□□□ 0.35
SREBF1-219ENST00000580540 LUC7L3O95232 432 aaKnown RBP17.2■□□□□ 0.34
SREBF1-219ENST00000580540 CAVIN2O95810 425 aa17.2■□□□□ 0.34
SREBF1-219ENST00000580540 FMO1Q01740 532 aa17.2■□□□□ 0.34
SREBF1-219ENST00000580540 RPL6Q02878 288 aaKnown RBP17.2■□□□□ 0.34
SREBF1-219ENST00000580540 EIF4EBP2Q13542 120 aaPredicted RBP17.2■□□□□ 0.34
SREBF1-219ENST00000580540 KLHL40Q2TBA0 621 aa17.2■□□□□ 0.34
SREBF1-219ENST00000580540 FILIP1LQ4L180 1135 aa17.2■□□□□ 0.34
SREBF1-219ENST00000580540 FSCBQ5H9T9 825 aa17.2■□□□□ 0.34
SREBF1-219ENST00000580540 MMS22LQ6ZRQ5 1243 aa17.2■□□□□ 0.34
SREBF1-219ENST00000580540 CYP2U1Q7Z449 544 aa17.2■□□□□ 0.34
SREBF1-219ENST00000580540 CIR1Q86X95 450 aaPredicted RBP17.2■□□□□ 0.34
SREBF1-219ENST00000580540 SLC30A5Q8TAD4 765 aa17.2■□□□□ 0.34
SREBF1-219ENST00000580540 PIGKQ92643 395 aa17.2■□□□□ 0.34
SREBF1-219ENST00000580540 SIK2Q9H0K1 926 aa17.2■□□□□ 0.34
SREBF1-219ENST00000580540 PRDM16Q9HAZ2 1276 aa17.2■□□□□ 0.34
SREBF1-219ENST00000580540 CD248Q9HCU0 757 aa17.2■□□□□ 0.34
SREBF1-219ENST00000580540 RRN3Q9NYV6 651 aa17.2■□□□□ 0.34
SREBF1-219ENST00000580540 BCLAF3A2AJT9 711 aaKnown RBP17.19■□□□□ 0.34
SREBF1-219ENST00000580540 GDF9O60383 454 aa17.19■□□□□ 0.34
SREBF1-219ENST00000580540 ZNF217O75362 1048 aa17.19■□□□□ 0.34
SREBF1-219ENST00000580540 DLDP09622 509 aaKnown RBP17.19■□□□□ 0.34
SREBF1-219ENST00000580540 ZNF806P0C7X5 589 aa17.19■□□□□ 0.34
SREBF1-219ENST00000580540 TFE3P19532 575 aaPredicted RBP17.19■□□□□ 0.34
SREBF1-219ENST00000580540 GGCXP38435 758 aa17.19■□□□□ 0.34
SREBF1-219ENST00000580540 CSKP41240 450 aa17.19■□□□□ 0.34
SREBF1-219ENST00000580540 NUMBP49757 651 aa17.19■□□□□ 0.34
SREBF1-219ENST00000580540 DEUP1Q05D60 604 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms