RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 PCDHB4Q9Y5E5 795 aa12.03□□□□□ -0.48
PRPF40B-212ENST00000551111 TIMM44O43615 452 aa12.02□□□□□ -0.49
PRPF40B-212ENST00000551111 LTFP02788 710 aa12.02□□□□□ -0.49
PRPF40B-212ENST00000551111 SETSIPP0DME0 302 aa12.02□□□□□ -0.49
PRPF40B-212ENST00000551111 ACADMP11310 421 aa12.02□□□□□ -0.49
PRPF40B-212ENST00000551111 PABPC1P11940 636 aaKnown RBP12.02□□□□□ -0.49
PRPF40B-212ENST00000551111 OXTRP30559 389 aa12.02□□□□□ -0.49
PRPF40B-212ENST00000551111 RPS24P62847 133 aaKnown RBP12.02□□□□□ -0.49
PRPF40B-212ENST00000551111 RING1Q06587 406 aa12.02□□□□□ -0.49
PRPF40B-212ENST00000551111 SLC14A1Q13336 389 aa12.02□□□□□ -0.49
PRPF40B-212ENST00000551111 KIF19Q2TAC6 998 aa12.02□□□□□ -0.49
PRPF40B-212ENST00000551111 FSCBQ5H9T9 825 aa12.02□□□□□ -0.49
PRPF40B-212ENST00000551111 CFAP52Q8N1V2 620 aa12.02□□□□□ -0.49
PRPF40B-212ENST00000551111 PPM1KQ8N3J5 372 aa12.02□□□□□ -0.49
PRPF40B-212ENST00000551111 ADAM32Q8TC27 787 aa12.02□□□□□ -0.49
PRPF40B-212ENST00000551111 SNX19Q92543 992 aa12.02□□□□□ -0.49
PRPF40B-212ENST00000551111 SMARCE1Q969G3 411 aa12.02□□□□□ -0.49
PRPF40B-212ENST00000551111 FCRL2Q96LA5 508 aaPredicted RBP12.02□□□□□ -0.49
PRPF40B-212ENST00000551111 TSG101Q99816 390 aa12.02□□□□□ -0.49
PRPF40B-212ENST00000551111 DNAI2Q9GZS0 605 aa12.02□□□□□ -0.49
PRPF40B-212ENST00000551111 MIS12Q9H081 205 aa12.02□□□□□ -0.49
PRPF40B-212ENST00000551111 LHX5Q9H2C1 402 aa12.02□□□□□ -0.49
PRPF40B-212ENST00000551111 ACP6Q9NPH0 428 aa12.02□□□□□ -0.49
PRPF40B-212ENST00000551111 TM7SF3Q9NS93 570 aa12.02□□□□□ -0.49
PRPF40B-212ENST00000551111 RMND1Q9NWS8 449 aa12.02□□□□□ -0.49
PRPF40B-212ENST00000551111 SERGEFQ9UGK8 458 aa12.02□□□□□ -0.49
PRPF40B-212ENST00000551111 MAN1B1Q9UKM7 699 aa12.02□□□□□ -0.49
PRPF40B-212ENST00000551111 PCOLCE2Q9UKZ9 415 aa12.02□□□□□ -0.49
PRPF40B-212ENST00000551111 NAALADL1Q9UQQ1 740 aa12.02□□□□□ -0.49
PRPF40B-212ENST00000551111 NFE2L3Q9Y4A8 694 aa12.02□□□□□ -0.49
PRPF40B-212ENST00000551111 SNX11Q9Y5W9 270 aa12.02□□□□□ -0.49
PRPF40B-212ENST00000551111 ASXL3Q9C0F0 2248 aa12.01□□□□□ -0.49
PRPF40B-212ENST00000551111 TMEM8BA6NDV4 472 aa12.01□□□□□ -0.49
PRPF40B-212ENST00000551111 PPP1R3GB7ZBB8 358 aa12.01□□□□□ -0.49
PRPF40B-212ENST00000551111 M0QYV0 167 aa12.01□□□□□ -0.49
PRPF40B-212ENST00000551111 ACSL4O60488 711 aa12.01□□□□□ -0.49
PRPF40B-212ENST00000551111 PAEPP09466 180 aa12.01□□□□□ -0.49
PRPF40B-212ENST00000551111 DLDP09622 509 aaKnown RBP12.01□□□□□ -0.49
PRPF40B-212ENST00000551111 ATXN1LP0C7T5 689 aaKnown RBP12.01□□□□□ -0.49
PRPF40B-212ENST00000551111 C7P10643 843 aa12.01□□□□□ -0.49
PRPF40B-212ENST00000551111 CTSOP43234 321 aaPredicted RBP12.01□□□□□ -0.49
PRPF40B-212ENST00000551111 PITX1P78337 314 aaPredicted RBP12.01□□□□□ -0.49
PRPF40B-212ENST00000551111 ARID5AQ03989 594 aa12.01□□□□□ -0.49
PRPF40B-212ENST00000551111 LRRC63Q05C16 580 aa12.01□□□□□ -0.49
PRPF40B-212ENST00000551111 SCAPQ12770 1279 aa12.01□□□□□ -0.49
PRPF40B-212ENST00000551111 CNGA2Q16280 664 aa12.01□□□□□ -0.49
PRPF40B-212ENST00000551111 SYPL2Q5VXT5 272 aa12.01□□□□□ -0.49
PRPF40B-212ENST00000551111 KLHL10Q6JEL2 608 aa12.01□□□□□ -0.49
PRPF40B-212ENST00000551111 TTI2Q6NXR4 508 aa12.01□□□□□ -0.49
PRPF40B-212ENST00000551111 SCUBE3Q8IX30 993 aa12.01□□□□□ -0.49
PRPF40B-212ENST00000551111 SCML4Q8N228 414 aa12.01□□□□□ -0.49
PRPF40B-212ENST00000551111 BAHD1Q8TBE0 780 aaPredicted RBP12.01□□□□□ -0.49
PRPF40B-212ENST00000551111 SETD7Q8WTS6 366 aaKnown RBP12.01□□□□□ -0.49
PRPF40B-212ENST00000551111 ADAMTS14Q8WXS8 1223 aa12.01□□□□□ -0.49
PRPF40B-212ENST00000551111 BIRC7Q96CA5 298 aa12.01□□□□□ -0.49
PRPF40B-212ENST00000551111 MRGPRX3Q96LB0 322 aa12.01□□□□□ -0.49
PRPF40B-212ENST00000551111 NT5C1BQ96P26 610 aa12.01□□□□□ -0.49
PRPF40B-212ENST00000551111 NUCKS1Q9H1E3 243 aaKnown RBP12.01□□□□□ -0.49
PRPF40B-212ENST00000551111 EBF2Q9HAK2 575 aa12.01□□□□□ -0.49
PRPF40B-212ENST00000551111 TM9SF3Q9HD45 589 aa12.01□□□□□ -0.49
PRPF40B-212ENST00000551111 CYTH4Q9UIA0 394 aa12.01□□□□□ -0.49
PRPF40B-212ENST00000551111 PLA2G4CQ9UP65 541 aa12.01□□□□□ -0.49
PRPF40B-212ENST00000551111 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.01□□□□□ -0.49
PRPF40B-212ENST00000551111 PCDHB9Q9Y5E1 797 aa12.01□□□□□ -0.49
PRPF40B-212ENST00000551111 ATP6V1DQ9Y5K8 247 aa12.01□□□□□ -0.49
PRPF40B-212ENST00000551111 FASNP49327 2511 aaKnown RBP12□□□□□ -0.49
PRPF40B-212ENST00000551111 SHROOM3Q8TF72 1996 aa12□□□□□ -0.49
PRPF40B-212ENST00000551111 FSBPO95073 299 aa12□□□□□ -0.49
PRPF40B-212ENST00000551111 SEMA4FO95754 770 aa12□□□□□ -0.49
PRPF40B-212ENST00000551111 IGHV4-34P06331 123 aa12□□□□□ -0.49
PRPF40B-212ENST00000551111 TBXAS1P24557 533 aaPredicted RBP12□□□□□ -0.49
PRPF40B-212ENST00000551111 CSKP41240 450 aa12□□□□□ -0.49
PRPF40B-212ENST00000551111 MATKP42679 507 aa12□□□□□ -0.49
PRPF40B-212ENST00000551111 STX17P56962 302 aa12□□□□□ -0.49
PRPF40B-212ENST00000551111 TBX4P57082 545 aa12□□□□□ -0.49
PRPF40B-212ENST00000551111 YWHAEP62258 255 aaKnown RBP12□□□□□ -0.49
PRPF40B-212ENST00000551111 APBA1Q02410 837 aa12□□□□□ -0.49
PRPF40B-212ENST00000551111 ZNF423Q2M1K9 1284 aa12□□□□□ -0.49
PRPF40B-212ENST00000551111 PRAMEF14Q5SWL7 426 aa12□□□□□ -0.49
PRPF40B-212ENST00000551111 DENND1BQ6P3S1 775 aa12□□□□□ -0.49
PRPF40B-212ENST00000551111 CCNI2Q6ZMN8 369 aaPredicted RBP12□□□□□ -0.49
PRPF40B-212ENST00000551111 DBX2Q6ZNG2 339 aa12□□□□□ -0.49
PRPF40B-212ENST00000551111 AHI1Q8N157 1196 aa12□□□□□ -0.49
PRPF40B-212ENST00000551111 MDM1Q8TC05 714 aa12□□□□□ -0.49
PRPF40B-212ENST00000551111 DQX1Q8TE96 717 aaKnown RBP12□□□□□ -0.49
PRPF40B-212ENST00000551111 WFIKKN2Q8TEU8 576 aa12□□□□□ -0.49
PRPF40B-212ENST00000551111 SLC39A13Q96H72 371 aa12□□□□□ -0.49
PRPF40B-212ENST00000551111 ZDHHC5Q9C0B5 715 aa12□□□□□ -0.49
PRPF40B-212ENST00000551111 TJP2Q9UDY2 1190 aa12□□□□□ -0.49
PRPF40B-212ENST00000551111 KIAA1257Q9ULG3 409 aa12□□□□□ -0.49
PRPF40B-212ENST00000551111 DOCK4Q8N1I0 1966 aa11.99□□□□□ -0.49
PRPF40B-212ENST00000551111 GOLGA8CPA6NN73 597 aa11.99□□□□□ -0.49
PRPF40B-212ENST00000551111 H0Y626 953 aa11.99□□□□□ -0.49
PRPF40B-212ENST00000551111 H0Y8X5 98 aa11.99□□□□□ -0.49
PRPF40B-212ENST00000551111 BIN1O00499 593 aa11.99□□□□□ -0.49
PRPF40B-212ENST00000551111 WNT9AO14904 365 aa11.99□□□□□ -0.49
PRPF40B-212ENST00000551111 PMM2O15305 246 aa11.99□□□□□ -0.49
PRPF40B-212ENST00000551111 SIN3BO75182 1162 aa11.99□□□□□ -0.49
PRPF40B-212ENST00000551111 GADD45BO75293 160 aaPredicted RBP11.99□□□□□ -0.49
PRPF40B-212ENST00000551111 SMC2O95347 1197 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms