RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 PNKPQ96T60 521 aa20.11■□□□□ 0.81
DDX55-207ENST00000540763 EIF3CQ99613 913 aaKnown RBP20.11■□□□□ 0.81
DDX55-207ENST00000540763 BAG1Q99933 345 aaPredicted RBP20.11■□□□□ 0.81
DDX55-207ENST00000540763 NUP85Q9BW27 656 aa20.11■□□□□ 0.81
DDX55-207ENST00000540763 FOXQ1Q9C009 403 aa20.11■□□□□ 0.81
DDX55-207ENST00000540763 DEC1Q9P2X7 70 aa20.11■□□□□ 0.81
DDX55-207ENST00000540763 SLC27A6Q9Y2P4 619 aa20.11■□□□□ 0.81
DDX55-207ENST00000540763 CHRNB1P11230 501 aa20.1■□□□□ 0.81
DDX55-207ENST00000540763 NRG1Q02297 640 aaPredicted RBP20.1■□□□□ 0.81
DDX55-207ENST00000540763 ZNF252P-AS1Q0IIN9 211 aa20.1■□□□□ 0.81
DDX55-207ENST00000540763 FZD5Q13467 585 aa20.1■□□□□ 0.81
DDX55-207ENST00000540763 PIGHQ14442 188 aaPredicted RBP20.1■□□□□ 0.81
DDX55-207ENST00000540763 C5orf22Q49AR2 442 aa20.1■□□□□ 0.81
DDX55-207ENST00000540763 RABGAP1LQ5R372 815 aa20.1■□□□□ 0.81
DDX55-207ENST00000540763 SH3PXD2AQ5TCZ1 1133 aa20.1■□□□□ 0.81
DDX55-207ENST00000540763 RAP1GAP2Q684P5 730 aa20.1■□□□□ 0.81
DDX55-207ENST00000540763 FSTL4Q6MZW2 842 aa20.1■□□□□ 0.81
DDX55-207ENST00000540763 RFWD3Q6PCD5 774 aa20.1■□□□□ 0.81
DDX55-207ENST00000540763 NUDT18Q6ZVK8 323 aa20.1■□□□□ 0.81
DDX55-207ENST00000540763 TMEM139Q8IV31 216 aa20.1■□□□□ 0.81
DDX55-207ENST00000540763 RHOT2Q8IXI1 618 aa20.1■□□□□ 0.81
DDX55-207ENST00000540763 PACSIN1Q9BY11 444 aa20.1■□□□□ 0.81
DDX55-207ENST00000540763 DNAJC17Q9NVM6 304 aaKnown RBP20.1■□□□□ 0.81
DDX55-207ENST00000540763 NDRG2Q9UN36 371 aaKnown RBP20.1■□□□□ 0.81
DDX55-207ENST00000540763 HS3ST4Q9Y661 456 aa20.1■□□□□ 0.81
DDX55-207ENST00000540763 CACNA1HO95180 2353 aa20.1■□□□□ 0.81
DDX55-207ENST00000540763 GOLGA6L7A0A1B0GV03 622 aa20.09■□□□□ 0.81
DDX55-207ENST00000540763 I6L893 689 aaPredicted RBP20.09■□□□□ 0.81
DDX55-207ENST00000540763 RNF8O76064 485 aa20.09■□□□□ 0.81
DDX55-207ENST00000540763 NDUFA10O95299 355 aa20.09■□□□□ 0.81
DDX55-207ENST00000540763 APODP05090 189 aa20.09■□□□□ 0.81
DDX55-207ENST00000540763 ADRA1BP35368 520 aa20.09■□□□□ 0.81
DDX55-207ENST00000540763 GRIA2P42262 883 aa20.09■□□□□ 0.81
DDX55-207ENST00000540763 DGKGP49619 791 aa20.09■□□□□ 0.81
DDX55-207ENST00000540763 NUBP1P53384 320 aa20.09■□□□□ 0.81
DDX55-207ENST00000540763 TCEAL1Q15170 157 aa20.09■□□□□ 0.81
DDX55-207ENST00000540763 SPA17Q15506 151 aa20.09■□□□□ 0.81
DDX55-207ENST00000540763 GRAMD4Q6IC98 578 aa20.09■□□□□ 0.81
DDX55-207ENST00000540763 LGI2Q8N0V4 545 aa20.09■□□□□ 0.81
DDX55-207ENST00000540763 TERB1Q8NA31 727 aa20.09■□□□□ 0.81
DDX55-207ENST00000540763 ZNF564Q8TBZ8 553 aaPredicted RBP20.09■□□□□ 0.81
DDX55-207ENST00000540763 P2RY11Q96G91 374 aa20.09■□□□□ 0.81
DDX55-207ENST00000540763 OSBPL2Q9H1P3 480 aa20.09■□□□□ 0.81
DDX55-207ENST00000540763 ANLNQ9NQW6 1124 aa20.09■□□□□ 0.81
DDX55-207ENST00000540763 ARHGEF4Q9NR80 690 aa20.09■□□□□ 0.81
DDX55-207ENST00000540763 PLK2Q9NYY3 685 aa20.09■□□□□ 0.81
DDX55-207ENST00000540763 DLGAP2Q9P1A6 1054 aa20.09■□□□□ 0.81
DDX55-207ENST00000540763 IP6K2Q9UHH9 426 aa20.09■□□□□ 0.81
DDX55-207ENST00000540763 ANAPC7Q9UJX3 599 aa20.09■□□□□ 0.81
DDX55-207ENST00000540763 MTF2Q9Y483 593 aaPredicted RBP20.09■□□□□ 0.81
DDX55-207ENST00000540763 EPN1Q9Y6I3 576 aaPredicted RBP20.09■□□□□ 0.81
DDX55-207ENST00000540763 A0A1B0GVM2 712 aa20.08■□□□□ 0.81
DDX55-207ENST00000540763 TCAF2A6NFQ2 919 aa20.08■□□□□ 0.81
DDX55-207ENST00000540763 SOWAHDA6NJG2 315 aa20.08■□□□□ 0.81
DDX55-207ENST00000540763 TSPAN3O60637 253 aa20.08■□□□□ 0.81
DDX55-207ENST00000540763 MTA2O94776 668 aa20.08■□□□□ 0.81
DDX55-207ENST00000540763 KAT7O95251 611 aa20.08■□□□□ 0.81
DDX55-207ENST00000540763 IPO7O95373 1038 aaKnown RBP20.08■□□□□ 0.81
DDX55-207ENST00000540763 PCK1P35558 622 aa20.08■□□□□ 0.81
DDX55-207ENST00000540763 SGSHP51688 502 aa20.08■□□□□ 0.81
DDX55-207ENST00000540763 AUHQ13825 339 aaKnown RBP20.08■□□□□ 0.81
DDX55-207ENST00000540763 NAIF1Q69YI7 327 aaPredicted RBP20.08■□□□□ 0.81
DDX55-207ENST00000540763 FBXL22Q6P050 247 aa20.08■□□□□ 0.81
DDX55-207ENST00000540763 NAT16Q8N8M0 369 aa20.08■□□□□ 0.81
DDX55-207ENST00000540763 RFFLQ8WZ73 363 aa20.08■□□□□ 0.81
DDX55-207ENST00000540763 TRIM7Q9C029 511 aa20.08■□□□□ 0.81
DDX55-207ENST00000540763 CHRDQ9H2X0 955 aa20.08■□□□□ 0.81
DDX55-207ENST00000540763 FBRSL1Q9HCM7 1045 aaKnown RBP20.08■□□□□ 0.81
DDX55-207ENST00000540763 CTTNBP2NLQ9P2B4 639 aa20.08■□□□□ 0.81
DDX55-207ENST00000540763 IGLV3-10A0A075B6K4 115 aa20.07■□□□□ 0.8
DDX55-207ENST00000540763 MYO1FO00160 1098 aa20.07■□□□□ 0.8
DDX55-207ENST00000540763 TBL1XO60907 577 aa20.07■□□□□ 0.8
DDX55-207ENST00000540763 CISD3P0C7P0 127 aa20.07■□□□□ 0.8
DDX55-207ENST00000540763 TNFRSF4P43489 277 aa20.07■□□□□ 0.8
DDX55-207ENST00000540763 SLC6A11P48066 632 aa20.07■□□□□ 0.8
DDX55-207ENST00000540763 RAB6CQ53S08 254 aa20.07■□□□□ 0.8
DDX55-207ENST00000540763 LRRC31Q6UY01 552 aa20.07■□□□□ 0.8
DDX55-207ENST00000540763 SLFN11Q7Z7L1 901 aa20.07■□□□□ 0.8
DDX55-207ENST00000540763 PSTKQ8IV42 348 aaKnown RBP20.07■□□□□ 0.8
DDX55-207ENST00000540763 ZNF683Q8IZ20 524 aa20.07■□□□□ 0.8
DDX55-207ENST00000540763 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.07■□□□□ 0.8
DDX55-207ENST00000540763 CCDC112Q8NEF3 446 aa20.07■□□□□ 0.8
DDX55-207ENST00000540763 KCNV2Q8TDN2 545 aa20.07■□□□□ 0.8
DDX55-207ENST00000540763 BHMTQ93088 406 aa20.07■□□□□ 0.8
DDX55-207ENST00000540763 PHOX2BQ99453 314 aa20.07■□□□□ 0.8
DDX55-207ENST00000540763 RAB6CQ9H0N0 254 aa20.07■□□□□ 0.8
DDX55-207ENST00000540763 RETREG1Q9H6L5 497 aa20.07■□□□□ 0.8
DDX55-207ENST00000540763 LMAN1LQ9HAT1 526 aa20.07■□□□□ 0.8
DDX55-207ENST00000540763 PI15O43692 258 aa20.06■□□□□ 0.8
DDX55-207ENST00000540763 LRCH4O75427 683 aa20.06■□□□□ 0.8
DDX55-207ENST00000540763 LUC7L3O95232 432 aaKnown RBP20.06■□□□□ 0.8
DDX55-207ENST00000540763 EGFP01133 1207 aa20.06■□□□□ 0.8
DDX55-207ENST00000540763 AVPR2P30518 371 aa20.06■□□□□ 0.8
DDX55-207ENST00000540763 MAGEA1P43355 309 aa20.06■□□□□ 0.8
DDX55-207ENST00000540763 RPS24P62847 133 aaKnown RBP20.06■□□□□ 0.8
DDX55-207ENST00000540763 KDSRQ06136 332 aa20.06■□□□□ 0.8
DDX55-207ENST00000540763 E2F5Q15329 346 aa20.06■□□□□ 0.8
DDX55-207ENST00000540763 EFHC2Q5JST6 749 aa20.06■□□□□ 0.8
DDX55-207ENST00000540763 RAD9BQ6WBX8 426 aa20.06■□□□□ 0.8
DDX55-207ENST00000540763 MAMSTRQ6ZN01 415 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms