RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 PTPN11Q06124 597 aaPredicted RBP7.75□□□□□ -1.17
HDAC3-216ENST00000523088 FAAP100Q0VG06 881 aa7.75□□□□□ -1.17
HDAC3-216ENST00000523088 RALGDSQ12967 914 aa7.75□□□□□ -1.17
HDAC3-216ENST00000523088 DUSP4Q13115 394 aa7.75□□□□□ -1.17
HDAC3-216ENST00000523088 ADAM15Q13444 863 aa7.75□□□□□ -1.17
HDAC3-216ENST00000523088 SF3B4Q15427 424 aaKnown RBP eCLIP7.75□□□□□ -1.172e-7■■■■■ 49
HDAC3-216ENST00000523088 IFI16Q16666 785 aaKnown RBP7.75□□□□□ -1.17
HDAC3-216ENST00000523088 SLC45A4Q5BKX6 768 aa7.75□□□□□ -1.17
HDAC3-216ENST00000523088 C6orf132Q5T0Z8 1188 aa7.75□□□□□ -1.17
HDAC3-216ENST00000523088 C6orf183Q5T699 404 aa7.75□□□□□ -1.17
HDAC3-216ENST00000523088 OR52E8Q6IFG1 317 aa7.75□□□□□ -1.17
HDAC3-216ENST00000523088 TAPT1Q6NXT6 567 aa7.75□□□□□ -1.17
HDAC3-216ENST00000523088 FBXO11Q86XK2 927 aa7.75□□□□□ -1.17
HDAC3-216ENST00000523088 TICAM1Q8IUC6 712 aa7.75□□□□□ -1.17
HDAC3-216ENST00000523088 ANKMY2Q8IV38 441 aa7.75□□□□□ -1.17
HDAC3-216ENST00000523088 MMAAQ8IVH4 418 aaKnown RBP7.75□□□□□ -1.17
HDAC3-216ENST00000523088 FBXO16Q8IX29 292 aaPredicted RBP7.75□□□□□ -1.17
HDAC3-216ENST00000523088 FAM126BQ8IXS8 530 aa7.75□□□□□ -1.17
HDAC3-216ENST00000523088 SLC38A6Q8IZM9 456 aa7.75□□□□□ -1.17
HDAC3-216ENST00000523088 LINC00518Q8N0U6 118 aa7.75□□□□□ -1.17
HDAC3-216ENST00000523088 ELMOD1Q8N336 334 aa7.75□□□□□ -1.17
HDAC3-216ENST00000523088 MLKLQ8NB16 471 aa7.75□□□□□ -1.17
HDAC3-216ENST00000523088 EPS8L1Q8TE68 723 aa7.75□□□□□ -1.17
HDAC3-216ENST00000523088 NSUN6Q8TEA1 469 aaKnown RBP7.75□□□□□ -1.17
HDAC3-216ENST00000523088 CLEC4DQ8WXI8 215 aa7.75□□□□□ -1.17
HDAC3-216ENST00000523088 BRF1Q92994 677 aa7.75□□□□□ -1.17
HDAC3-216ENST00000523088 RAD51AP1Q96B01 352 aa7.75□□□□□ -1.17
HDAC3-216ENST00000523088 RRP36Q96EU6 259 aaKnown RBP7.75□□□□□ -1.17
HDAC3-216ENST00000523088 LRCH3Q96II8 777 aa7.75□□□□□ -1.17
HDAC3-216ENST00000523088 IFT74Q96LB3 600 aa7.75□□□□□ -1.17
HDAC3-216ENST00000523088 PIP5K1AQ99755 562 aa7.75□□□□□ -1.17
HDAC3-216ENST00000523088 USB1Q9BQ65 265 aaKnown RBP7.75□□□□□ -1.17
HDAC3-216ENST00000523088 HEPHQ9BQS7 1158 aa7.75□□□□□ -1.17
HDAC3-216ENST00000523088 DDX23Q9BUQ8 820 aaKnown RBP7.75□□□□□ -1.17
HDAC3-216ENST00000523088 AMNQ9BXJ7 453 aa7.75□□□□□ -1.17
HDAC3-216ENST00000523088 SLC26A6Q9BXS9 759 aa7.75□□□□□ -1.17
HDAC3-216ENST00000523088 WDR11Q9BZH6 1224 aa7.75□□□□□ -1.17
HDAC3-216ENST00000523088 EPB41L1Q9H4G0 881 aa7.75□□□□□ -1.17
HDAC3-216ENST00000523088 NUDT15Q9NV35 164 aa7.75□□□□□ -1.17
HDAC3-216ENST00000523088 POLR3BQ9NW08 1133 aaPredicted RBP7.75□□□□□ -1.17
HDAC3-216ENST00000523088 ZSWIM5Q9P217 1185 aa7.75□□□□□ -1.17
HDAC3-216ENST00000523088 IL19Q9UHD0 177 aa7.75□□□□□ -1.17
HDAC3-216ENST00000523088 RCOR1Q9UKL0 485 aa7.75□□□□□ -1.17
HDAC3-216ENST00000523088 PCOLCE2Q9UKZ9 415 aa7.75□□□□□ -1.17
HDAC3-216ENST00000523088 TBX21Q9UL17 535 aa7.75□□□□□ -1.17
HDAC3-216ENST00000523088 RAB21Q9UL25 225 aa7.75□□□□□ -1.17
HDAC3-216ENST00000523088 DERAQ9Y315 318 aa7.75□□□□□ -1.17
HDAC3-216ENST00000523088 PCDHGA10Q9Y5H3 936 aa7.75□□□□□ -1.17
HDAC3-216ENST00000523088 LAMA2P24043 3122 aaKnown RBP7.74□□□□□ -1.17
HDAC3-216ENST00000523088 MYH7BA7E2Y1 1941 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 LOC390937A0A1W2PQ73 354 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 MYADML2A6NDP7 307 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 EFCAB10A6NFE3 127 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 E9PBE3 544 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 F5H423 210 aaPredicted RBP7.74□□□□□ -1.17
HDAC3-216ENST00000523088 H0YCG3 227 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 POLR1CO15160 346 aaPredicted RBP7.74□□□□□ -1.17
HDAC3-216ENST00000523088 FANCGO15287 622 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 SSX5O60225 188 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 TOM1L1O75674 476 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 RBBP9O75884 186 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 WFS1O76024 890 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 OPN1LWP04000 364 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 RB1P06400 928 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 PGRP06401 933 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 GALTP07902 379 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 QDPRP09417 244 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 GSPT1P15170 499 aaKnown RBP7.74□□□□□ -1.17
HDAC3-216ENST00000523088 PCSK2P16519 638 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 SMPD1P17405 629 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 LAG3P18627 525 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 ATF4P18848 351 aaPredicted RBP7.74□□□□□ -1.17
HDAC3-216ENST00000523088 CYP3A5P20815 502 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 ETV5P41161 510 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 PTPN9P43378 593 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 GSSP48637 474 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 DIO1P49895 249 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 CARD18P57730 90 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 RNF4P78317 190 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 MRPS5P82675 430 aaKnown RBP7.74□□□□□ -1.17
HDAC3-216ENST00000523088 GHRHRQ02643 423 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 FUT2Q10981 343 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 DCTN2Q13561 401 aaKnown RBP7.74□□□□□ -1.17
HDAC3-216ENST00000523088 TEAD4Q15561 434 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 STXBP2Q15833 593 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 TMEM266Q2M3C6 531 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 ACCSLQ4AC99 568 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 EFHC1Q5JVL4 640 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 C6orf163Q5TEZ5 329 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 CNNM4Q6P4Q7 775 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 NFRKBQ6P4R8 1299 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 ELMSAN1Q6PJG2 1045 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 CLEC2AQ6UVW9 174 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 KDM7AQ6ZMT4 941 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 STOX1Q6ZVD7 989 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 STXBP4Q6ZWJ1 553 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 CAMK1DQ8IU85 385 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 DENND6AQ8IWF6 608 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 ADGRF4Q8IZF3 695 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 RGL4Q8IZJ4 473 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 142.6 ms