RNA–Protein interactions for RNA: ENST00000522117.5

SPIDR-217, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,745 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-217ENST00000522117 MAD2L2Q9UI95 211 aa12.35□□□□□ -0.43
SPIDR-217ENST00000522117 PTBP2Q9UKA9 531 aaKnown RBP12.35□□□□□ -0.43
SPIDR-217ENST00000522117 SYCE1LA8MT33 242 aa12.35□□□□□ -0.43
SPIDR-217ENST00000522117 CYB561D2O14569 222 aa12.35□□□□□ -0.43
SPIDR-217ENST00000522117 SNX2O60749 519 aa12.35□□□□□ -0.43
SPIDR-217ENST00000522117 BCL10O95999 233 aa12.35□□□□□ -0.43
SPIDR-217ENST00000522117 CCNA2P20248 432 aa12.35□□□□□ -0.43
SPIDR-217ENST00000522117 ETFBP38117 255 aa12.35□□□□□ -0.43
SPIDR-217ENST00000522117 MS4A2Q01362 244 aa12.35□□□□□ -0.43
SPIDR-217ENST00000522117 C19orf57Q0VDD7 668 aa12.35□□□□□ -0.43
SPIDR-217ENST00000522117 ZNF846Q147U1 533 aa12.35□□□□□ -0.43
SPIDR-217ENST00000522117 SMU1Q2TAY7 513 aa12.35□□□□□ -0.43
SPIDR-217ENST00000522117 CBWD6Q4V339 395 aa12.35□□□□□ -0.43
SPIDR-217ENST00000522117 MSS51Q4VC12 460 aa12.35□□□□□ -0.43
SPIDR-217ENST00000522117 CBWD3Q5JTY5 395 aa12.35□□□□□ -0.43
SPIDR-217ENST00000522117 SLC10A5Q5PT55 438 aa12.35□□□□□ -0.43
SPIDR-217ENST00000522117 CBWD5Q5RIA9 395 aa12.35□□□□□ -0.43
SPIDR-217ENST00000522117 LDLRAP1Q5SW96 308 aa12.35□□□□□ -0.43
SPIDR-217ENST00000522117 C16orf46Q6P387 395 aa12.35□□□□□ -0.43
SPIDR-217ENST00000522117 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.35□□□□□ -0.43
SPIDR-217ENST00000522117 APOL6Q9BWW8 343 aa12.35□□□□□ -0.43
SPIDR-217ENST00000522117 KCNN3Q9UGI6 736 aa12.35□□□□□ -0.43
SPIDR-217ENST00000522117 USP21Q9UK80 565 aa12.35□□□□□ -0.43
SPIDR-217ENST00000522117 ARHGAP26Q9UNA1 814 aa12.35□□□□□ -0.43
SPIDR-217ENST00000522117 PCDHB13Q9Y5F0 798 aa12.35□□□□□ -0.43
SPIDR-217ENST00000522117 NRAPQ86VF7 1730 aa12.35□□□□□ -0.43
SPIDR-217ENST00000522117 ZNF839A8K0R7 811 aa12.34□□□□□ -0.43
SPIDR-217ENST00000522117 CLDN25C9JDP6 229 aa12.34□□□□□ -0.43
SPIDR-217ENST00000522117 CLIC2O15247 247 aa12.34□□□□□ -0.43
SPIDR-217ENST00000522117 TDP2O95551 362 aa12.34□□□□□ -0.43
SPIDR-217ENST00000522117 PAHP00439 452 aa12.34□□□□□ -0.43
SPIDR-217ENST00000522117 PLA2G4BP0C869 781 aa12.34□□□□□ -0.43
SPIDR-217ENST00000522117 M6PRP20645 277 aa12.34□□□□□ -0.43
SPIDR-217ENST00000522117 MSX2P35548 267 aaPredicted RBP12.34□□□□□ -0.43
SPIDR-217ENST00000522117 ARL1P40616 181 aaPredicted RBP12.34□□□□□ -0.43
SPIDR-217ENST00000522117 MAPK10P53779 464 aa12.34□□□□□ -0.43
SPIDR-217ENST00000522117 GPS1Q13098 491 aa12.34□□□□□ -0.43
SPIDR-217ENST00000522117 CIAPIN1Q6FI81 312 aa12.34□□□□□ -0.43
SPIDR-217ENST00000522117 MAVSQ7Z434 540 aa12.34□□□□□ -0.43
SPIDR-217ENST00000522117 PHTF2Q8N3S3 785 aa12.34□□□□□ -0.43
SPIDR-217ENST00000522117 PDPRQ8NCN5 879 aa12.34□□□□□ -0.43
SPIDR-217ENST00000522117 APPL2Q8NEU8 664 aa12.34□□□□□ -0.43
SPIDR-217ENST00000522117 BHLHE22Q8NFJ8 381 aaPredicted RBP12.34□□□□□ -0.43
SPIDR-217ENST00000522117 NELL1Q92832 810 aa12.34□□□□□ -0.43
SPIDR-217ENST00000522117 GLMNQ92990 594 aa12.34□□□□□ -0.43
SPIDR-217ENST00000522117 VPS35Q96QK1 796 aa12.34□□□□□ -0.43
SPIDR-217ENST00000522117 EMILIN2Q9BXX0 1053 aa12.34□□□□□ -0.43
SPIDR-217ENST00000522117 AVENQ9NQS1 362 aaPredicted RBP12.34□□□□□ -0.43
SPIDR-217ENST00000522117 CNNM1Q9NRU3 951 aa12.34□□□□□ -0.43
SPIDR-217ENST00000522117 NXF1Q9UBU9 619 aaKnown RBP12.34□□□□□ -0.43
SPIDR-217ENST00000522117 SPEF1Q9Y4P9 236 aa12.34□□□□□ -0.43
SPIDR-217ENST00000522117 ARHGEF35A5YM69 484 aa12.34□□□□□ -0.43
SPIDR-217ENST00000522117 H7C0C1 242 aa12.34□□□□□ -0.43
SPIDR-217ENST00000522117 ACOX3O15254 700 aa12.34□□□□□ -0.43
SPIDR-217ENST00000522117 KRT6AP02538 564 aa12.34□□□□□ -0.43
SPIDR-217ENST00000522117 KRT6BP04259 564 aa12.34□□□□□ -0.43
SPIDR-217ENST00000522117 COX4I1P13073 169 aa12.34□□□□□ -0.43
SPIDR-217ENST00000522117 KRT10P13645 584 aa12.34□□□□□ -0.43
SPIDR-217ENST00000522117 ELMOD2Q8IZ81 293 aa12.34□□□□□ -0.43
SPIDR-217ENST00000522117 TOR1AIP2Q8NFQ8 470 aa12.34□□□□□ -0.43
SPIDR-217ENST00000522117 FRS2Q8WU20 508 aa12.34□□□□□ -0.43
SPIDR-217ENST00000522117 COQ7Q99807 217 aa12.34□□□□□ -0.43
SPIDR-217ENST00000522117 ZHX3Q9H4I2 956 aa12.34□□□□□ -0.43
SPIDR-217ENST00000522117 POLR1BQ9H9Y6 1135 aa12.34□□□□□ -0.43
SPIDR-217ENST00000522117 WDR6Q9NNW5 1121 aaKnown RBP12.34□□□□□ -0.43
SPIDR-217ENST00000522117 C12orf4Q9NQ89 552 aa12.34□□□□□ -0.43
SPIDR-217ENST00000522117 DUS2Q9NX74 493 aaKnown RBP12.34□□□□□ -0.43
SPIDR-217ENST00000522117 TMEM260Q9NX78 707 aa12.34□□□□□ -0.43
SPIDR-217ENST00000522117 TXNDC16Q9P2K2 825 aa12.34□□□□□ -0.43
SPIDR-217ENST00000522117 PLLPQ9Y342 182 aa12.34□□□□□ -0.43
SPIDR-217ENST00000522117 BAZ2AQ9UIF9 1905 aaKnown RBP12.33□□□□□ -0.43
SPIDR-217ENST00000522117 H0YIN7 160 aa12.33□□□□□ -0.44
SPIDR-217ENST00000522117 GOLGA8SH3BPF8 625 aa12.33□□□□□ -0.44
SPIDR-217ENST00000522117 TAF4O00268 1085 aa12.33□□□□□ -0.44
SPIDR-217ENST00000522117 COPEO14579 308 aa12.33□□□□□ -0.44
SPIDR-217ENST00000522117 ENPP3O14638 875 aa12.33□□□□□ -0.44
SPIDR-217ENST00000522117 HTRA2O43464 458 aaPredicted RBP12.33□□□□□ -0.44
SPIDR-217ENST00000522117 KCNH1O95259 989 aa12.33□□□□□ -0.44
SPIDR-217ENST00000522117 ZBTB7AO95365 584 aa12.33□□□□□ -0.44
SPIDR-217ENST00000522117 FGFR2P21802 821 aa12.33□□□□□ -0.44
SPIDR-217ENST00000522117 CYP7A1P22680 504 aa12.33□□□□□ -0.44
SPIDR-217ENST00000522117 SLC26A2P50443 739 aa12.33□□□□□ -0.44
SPIDR-217ENST00000522117 ARSEP51690 589 aa12.33□□□□□ -0.44
SPIDR-217ENST00000522117 MRPS5P82675 430 aaKnown RBP12.33□□□□□ -0.44
SPIDR-217ENST00000522117 GRM4Q14833 912 aa12.33□□□□□ -0.44
SPIDR-217ENST00000522117 STILQ15468 1287 aa12.33□□□□□ -0.44
SPIDR-217ENST00000522117 MAPRE1Q15691 268 aaKnown RBP12.33□□□□□ -0.44
SPIDR-217ENST00000522117 CARTPTQ16568 116 aa12.33□□□□□ -0.44
SPIDR-217ENST00000522117 FNBP1LQ5T0N5 605 aa12.33□□□□□ -0.44
SPIDR-217ENST00000522117 PLEKHG7Q6ZR37 379 aa12.33□□□□□ -0.44
SPIDR-217ENST00000522117 DEPDC4Q8N2C3 294 aa12.33□□□□□ -0.44
SPIDR-217ENST00000522117 ZNF786Q8N393 782 aa12.33□□□□□ -0.44
SPIDR-217ENST00000522117 BEND7Q8N7W2 519 aaPredicted RBP12.33□□□□□ -0.44
SPIDR-217ENST00000522117 ABHD11Q8NFV4 315 aa12.33□□□□□ -0.44
SPIDR-217ENST00000522117 DPF3Q92784 378 aa12.33□□□□□ -0.44
SPIDR-217ENST00000522117 PSKH2Q96QS6 385 aa12.33□□□□□ -0.44
SPIDR-217ENST00000522117 YME1L1Q96TA2 773 aa12.33□□□□□ -0.44
SPIDR-217ENST00000522117 MMP19Q99542 508 aa12.33□□□□□ -0.44
SPIDR-217ENST00000522117 ISCA1Q9BUE6 129 aa12.33□□□□□ -0.44
SPIDR-217ENST00000522117 PLA2G12BQ9BX93 195 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 129.7 ms