RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 H3BNC9 293 aa6.03□□□□□ -1.44
SSR3-208ENST00000496050 ATP1A3P13637 1013 aa6.03□□□□□ -1.44
SSR3-208ENST00000496050 APEHP13798 732 aaKnown RBP6.03□□□□□ -1.44
SSR3-208ENST00000496050 IGFBP2P18065 325 aa6.03□□□□□ -1.44
SSR3-208ENST00000496050 CYP4F2P78329 520 aa6.03□□□□□ -1.44
SSR3-208ENST00000496050 CDK18Q07002 472 aa6.03□□□□□ -1.44
SSR3-208ENST00000496050 GOLGA8FQ08AF8 430 aa6.03□□□□□ -1.44
SSR3-208ENST00000496050 ALKBH1Q13686 389 aaKnown RBP6.03□□□□□ -1.44
SSR3-208ENST00000496050 BAK1Q16611 211 aa6.03□□□□□ -1.44
SSR3-208ENST00000496050 HECTD2Q5U5R9 776 aa6.03□□□□□ -1.44
SSR3-208ENST00000496050 LIPMQ5VYY2 423 aa6.03□□□□□ -1.44
SSR3-208ENST00000496050 VSTM1Q6UX27 236 aa6.03□□□□□ -1.44
SSR3-208ENST00000496050 BCDIN3DQ7Z5W3 292 aaKnown RBP6.03□□□□□ -1.44
SSR3-208ENST00000496050 BEND2Q8NDZ0 799 aa6.03□□□□□ -1.44
SSR3-208ENST00000496050 MAFAQ8NHW3 353 aaPredicted RBP6.03□□□□□ -1.44
SSR3-208ENST00000496050 ADAMTS18Q8TE60 1221 aa6.03□□□□□ -1.44
SSR3-208ENST00000496050 SH3KBP1Q96B97 665 aa6.03□□□□□ -1.44
SSR3-208ENST00000496050 KAZALD1Q96I82 304 aa6.03□□□□□ -1.44
SSR3-208ENST00000496050 FYTTD1Q96QD9 318 aaKnown RBP6.03□□□□□ -1.44
SSR3-208ENST00000496050 MMS19Q96T76 1030 aa6.03□□□□□ -1.44
SSR3-208ENST00000496050 HTATIP2Q9BUP3 242 aa6.03□□□□□ -1.44
SSR3-208ENST00000496050 TAOK3Q9H2K8 898 aa6.03□□□□□ -1.44
SSR3-208ENST00000496050 B3GNT3Q9Y2A9 372 aa6.03□□□□□ -1.44
SSR3-208ENST00000496050 GDAQ9Y2T3 454 aa6.03□□□□□ -1.44
SSR3-208ENST00000496050 GRID2IPA4D2P6 1211 aa6.02□□□□□ -1.45
SSR3-208ENST00000496050 BTBD19C9JJ37 291 aa6.02□□□□□ -1.45
SSR3-208ENST00000496050 GRM8O00222 908 aa6.02□□□□□ -1.45
SSR3-208ENST00000496050 GCATO75600 419 aa6.02□□□□□ -1.45
SSR3-208ENST00000496050 JTBO76095 146 aa6.02□□□□□ -1.45
SSR3-208ENST00000496050 CD4P01730 458 aa6.02□□□□□ -1.45
SSR3-208ENST00000496050 CSF1P09603 554 aa6.02□□□□□ -1.45
SSR3-208ENST00000496050 HNRNPA1P09651 372 aaKnown RBP eCLIP6.02□□□□□ -1.45
SSR3-208ENST00000496050 WEE2P0C1S8 567 aa6.02□□□□□ -1.45
SSR3-208ENST00000496050 ACP5P13686 325 aa6.02□□□□□ -1.45
SSR3-208ENST00000496050 DRD4P21917 467 aa6.02□□□□□ -1.45
SSR3-208ENST00000496050 SFPQP23246 707 aaKnown RBP eCLIP6.02□□□□□ -1.45
SSR3-208ENST00000496050 MAN1A1P33908 653 aa6.02□□□□□ -1.45
SSR3-208ENST00000496050 HOXD12P35452 270 aa6.02□□□□□ -1.45
SSR3-208ENST00000496050 SIM1P81133 766 aaPredicted RBP6.02□□□□□ -1.45
SSR3-208ENST00000496050 GLE1Q53GS7 698 aaKnown RBP6.02□□□□□ -1.45
SSR3-208ENST00000496050 TRIM72Q6ZMU5 477 aa6.02□□□□□ -1.45
SSR3-208ENST00000496050 CAGE1Q8TC20 777 aa6.02□□□□□ -1.45
SSR3-208ENST00000496050 RFFLQ8WZ73 363 aa6.02□□□□□ -1.45
SSR3-208ENST00000496050 MASTLQ96GX5 879 aa6.02□□□□□ -1.45
SSR3-208ENST00000496050 PRRX2Q99811 253 aa6.02□□□□□ -1.45
SSR3-208ENST00000496050 KRTAP4-8Q9BYQ9 185 aa6.02□□□□□ -1.45
SSR3-208ENST00000496050 TRIM2Q9C040 744 aa6.02□□□□□ -1.45
SSR3-208ENST00000496050 SYNPO2LQ9H987 977 aa6.02□□□□□ -1.45
SSR3-208ENST00000496050 MTMR4Q9NYA4 1195 aa6.02□□□□□ -1.45
SSR3-208ENST00000496050 TERF2IPQ9NYB0 399 aa6.02□□□□□ -1.45
SSR3-208ENST00000496050 MAP3K20Q9NYL2 800 aaKnown RBP6.02□□□□□ -1.45
SSR3-208ENST00000496050 SLC17A6Q9P2U8 582 aa6.02□□□□□ -1.45
SSR3-208ENST00000496050 PACSIN3Q9UKS6 424 aa6.02□□□□□ -1.45
SSR3-208ENST00000496050 CYP46A1Q9Y6A2 500 aa6.02□□□□□ -1.45
SSR3-208ENST00000496050 B4E171 279 aa6.01□□□□□ -1.45
SSR3-208ENST00000496050 PEX12O00623 359 aa6.01□□□□□ -1.45
SSR3-208ENST00000496050 DHX16O60231 1041 aaKnown RBP6.01□□□□□ -1.45
SSR3-208ENST00000496050 TULP3O75386 442 aa6.01□□□□□ -1.45
SSR3-208ENST00000496050 KAT7O95251 611 aa6.01□□□□□ -1.45
SSR3-208ENST00000496050 ENO1P06733 434 aaKnown RBP6.01□□□□□ -1.45
SSR3-208ENST00000496050 HNRNPCP07910 306 aaKnown RBP eCLIP6.01□□□□□ -1.457e-7■■□□□ 11.5
SSR3-208ENST00000496050 PRKCHP24723 683 aa6.01□□□□□ -1.45
SSR3-208ENST00000496050 TSPAN7P41732 249 aa6.01□□□□□ -1.45
SSR3-208ENST00000496050 CASP6P55212 293 aa6.01□□□□□ -1.45
SSR3-208ENST00000496050 ABHD18Q0P651 414 aa6.01□□□□□ -1.45
SSR3-208ENST00000496050 GAB1Q13480 694 aa6.01□□□□□ -1.45
SSR3-208ENST00000496050 CAMK1Q14012 370 aa6.01□□□□□ -1.45
SSR3-208ENST00000496050 NFIL3Q16649 462 aa6.01□□□□□ -1.45
SSR3-208ENST00000496050 PFKFB3Q16875 520 aaPredicted RBP6.01□□□□□ -1.45
SSR3-208ENST00000496050 RUNDC3AQ59EK9 446 aa6.01□□□□□ -1.45
SSR3-208ENST00000496050 TSTD2Q5T7W7 516 aa6.01□□□□□ -1.45
SSR3-208ENST00000496050 SLC9C2Q5TAH2 1124 aa6.01□□□□□ -1.45
SSR3-208ENST00000496050 ACAD10Q6JQN1 1059 aa6.01□□□□□ -1.45
SSR3-208ENST00000496050 CLEC4GQ6UXB4 293 aa6.01□□□□□ -1.45
SSR3-208ENST00000496050 KIAA1324Q6UXG2 1013 aaKnown RBP6.01□□□□□ -1.45
SSR3-208ENST00000496050 SERPINA13PQ6UXR4 307 aa6.01□□□□□ -1.45
SSR3-208ENST00000496050 DCDC5Q6ZRR9 648 aa6.01□□□□□ -1.45
SSR3-208ENST00000496050 PCGF5Q86SE9 256 aa6.01□□□□□ -1.45
SSR3-208ENST00000496050 ENDOVQ8N8Q3 282 aaKnown RBP6.01□□□□□ -1.45
SSR3-208ENST00000496050 LARP4BQ92615 738 aaKnown RBP6.01□□□□□ -1.45
SSR3-208ENST00000496050 ZUFSPQ96AP4 578 aa6.01□□□□□ -1.45
SSR3-208ENST00000496050 ZNF845Q96IR2 970 aaPredicted RBP6.01□□□□□ -1.45
SSR3-208ENST00000496050 HIC2Q96JB3 615 aa6.01□□□□□ -1.45
SSR3-208ENST00000496050 BBC3Q96PG8 261 aaPredicted RBP6.01□□□□□ -1.45
SSR3-208ENST00000496050 CD180Q99467 661 aa6.01□□□□□ -1.45
SSR3-208ENST00000496050 HERC2P3Q9BVR0 1158 aa6.01□□□□□ -1.45
SSR3-208ENST00000496050 ARHGAP39Q9C0H5 1083 aa6.01□□□□□ -1.45
SSR3-208ENST00000496050 CLPBQ9H078 707 aa6.01□□□□□ -1.45
SSR3-208ENST00000496050 ACAD9Q9H845 621 aa6.01□□□□□ -1.45
SSR3-208ENST00000496050 THAP1Q9NVV9 213 aa6.01□□□□□ -1.45
SSR3-208ENST00000496050 MYRFQ9Y2G1 1151 aa6.01□□□□□ -1.45
SSR3-208ENST00000496050 SIRT4Q9Y6E7 314 aaPredicted RBP6.01□□□□□ -1.45
SSR3-208ENST00000496050 H7C1Q1 480 aa6□□□□□ -1.45
SSR3-208ENST00000496050 HOXB9P17482 250 aaPredicted RBP6□□□□□ -1.45
SSR3-208ENST00000496050 ATF7P17544 494 aaPredicted RBP6□□□□□ -1.45
SSR3-208ENST00000496050 PLA2G5P39877 138 aa6□□□□□ -1.45
SSR3-208ENST00000496050 STAT6P42226 847 aa6□□□□□ -1.45
SSR3-208ENST00000496050 RXRGP48443 463 aa6□□□□□ -1.45
SSR3-208ENST00000496050 VPS41P49754 854 aa6□□□□□ -1.45
SSR3-208ENST00000496050 RPS6KA3P51812 740 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms