RNA–Protein interactions for RNA: ENST00000484088.5

ITGB1-213, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-213ENST00000484088 PYM1Q9BRP8 204 aaKnown RBP2.6□□□□□ -1.99
ITGB1-213ENST00000484088 RNF26Q9BY78 433 aaPredicted RBP2.6□□□□□ -1.99
ITGB1-213ENST00000484088 AGXT2Q9BYV1 514 aa2.6□□□□□ -1.99
ITGB1-213ENST00000484088 MAF1Q9H063 256 aa2.6□□□□□ -1.99
ITGB1-213ENST00000484088 CCDC134Q9H6E4 229 aa2.6□□□□□ -1.99
ITGB1-213ENST00000484088 WDR26Q9H7D7 661 aa2.6□□□□□ -1.99
ITGB1-213ENST00000484088 RMI1Q9H9A7 625 aa2.6□□□□□ -1.99
ITGB1-213ENST00000484088 IL21RQ9HBE5 538 aa2.6□□□□□ -1.99
ITGB1-213ENST00000484088 TXNRD2Q9NNW7 524 aa2.6□□□□□ -1.99
ITGB1-213ENST00000484088 RIC8AQ9NPQ8 531 aa2.6□□□□□ -1.99
ITGB1-213ENST00000484088 TLR8Q9NR97 1041 aaKnown RBP2.6□□□□□ -1.99
ITGB1-213ENST00000484088 SNX15Q9NRS6 342 aa2.6□□□□□ -1.99
ITGB1-213ENST00000484088 LIN7CQ9NUP9 197 aaKnown RBP2.6□□□□□ -1.99
ITGB1-213ENST00000484088 FBXO28Q9NVF7 368 aa2.6□□□□□ -1.99
ITGB1-213ENST00000484088 MTMR4Q9NYA4 1195 aa2.6□□□□□ -1.99
ITGB1-213ENST00000484088 SLC17A6Q9P2U8 582 aa2.6□□□□□ -1.99
ITGB1-213ENST00000484088 HDAC6Q9UBN7 1215 aa2.6□□□□□ -1.99
ITGB1-213ENST00000484088 RAB21Q9UL25 225 aa2.6□□□□□ -1.99
ITGB1-213ENST00000484088 GTF2A1LQ9UNN4 478 aa2.6□□□□□ -1.99
ITGB1-213ENST00000484088 B3GNT3Q9Y2A9 372 aa2.6□□□□□ -1.99
ITGB1-213ENST00000484088 PCDHA10Q9Y5I2 948 aa2.6□□□□□ -1.99
ITGB1-213ENST00000484088 COPG1Q9Y678 874 aaKnown RBP2.6□□□□□ -1.99
ITGB1-213ENST00000484088 VWA3AA6NCI4 1184 aa2.59□□□□□ -1.99
ITGB1-213ENST00000484088 DNAJC9-AS1A6NH13 148 aa2.59□□□□□ -1.99
ITGB1-213ENST00000484088 NPIPB13A6NJU9 1138 aa2.59□□□□□ -1.99
ITGB1-213ENST00000484088 NPIPB5A8MRT5 1133 aa2.59□□□□□ -1.99
ITGB1-213ENST00000484088 EFCAB8A8MWE9 144 aa2.59□□□□□ -1.99
ITGB1-213ENST00000484088 NPIPB4C9JG80 1138 aa2.59□□□□□ -1.99
ITGB1-213ENST00000484088 CLIC1O00299 241 aa2.59□□□□□ -1.99
ITGB1-213ENST00000484088 CNTFP26441 200 aa2.59□□□□□ -1.99
ITGB1-213ENST00000484088 SOX2P48431 317 aa2.59□□□□□ -1.99
ITGB1-213ENST00000484088 PPM1FP49593 454 aaPredicted RBP2.59□□□□□ -1.99
ITGB1-213ENST00000484088 RCAN1P53805 252 aa2.59□□□□□ -1.99
ITGB1-213ENST00000484088 SOX10P56693 466 aa2.59□□□□□ -1.99
ITGB1-213ENST00000484088 SLC37A1P57057 533 aa2.59□□□□□ -1.99
ITGB1-213ENST00000484088 SSBP2P81877 361 aaPredicted RBP2.59□□□□□ -1.99
ITGB1-213ENST00000484088 TXNL4AP83876 142 aaKnown RBP2.59□□□□□ -1.99
ITGB1-213ENST00000484088 HOXA4Q00056 320 aaPredicted RBP2.59□□□□□ -1.99
ITGB1-213ENST00000484088 POU5F1BQ06416 359 aa2.59□□□□□ -1.99
ITGB1-213ENST00000484088 CHRNDQ07001 517 aa2.59□□□□□ -1.99
ITGB1-213ENST00000484088 PDCLQ13371 301 aa2.59□□□□□ -1.99
ITGB1-213ENST00000484088 MFSD13AQ14CX5 517 aa2.59□□□□□ -1.99
ITGB1-213ENST00000484088 P3H1Q32P28 736 aa2.59□□□□□ -1.99
ITGB1-213ENST00000484088 TBRG1Q3YBR2 411 aa2.59□□□□□ -1.99
ITGB1-213ENST00000484088 ALFQ53S48 1182 aa2.59□□□□□ -1.99
ITGB1-213ENST00000484088 HSP90AB4PQ58FF6 505 aa2.59□□□□□ -1.99
ITGB1-213ENST00000484088 ANKRD40Q6AI12 368 aa2.59□□□□□ -1.99
ITGB1-213ENST00000484088 CEP85Q6P2H3 762 aa2.59□□□□□ -1.99
ITGB1-213ENST00000484088 ZNF474Q6S9Z5 364 aaPredicted RBP2.59□□□□□ -1.99
ITGB1-213ENST00000484088 KRT27Q7Z3Y8 459 aa2.59□□□□□ -1.99
ITGB1-213ENST00000484088 MDGA2Q7Z553 956 aa2.59□□□□□ -1.99
ITGB1-213ENST00000484088 GRASPQ7Z6J2 395 aaPredicted RBP2.59□□□□□ -1.99
ITGB1-213ENST00000484088 CHSY1Q86X52 802 aa2.59□□□□□ -1.99
ITGB1-213ENST00000484088 P3H2Q8IVL5 708 aa2.59□□□□□ -1.99
ITGB1-213ENST00000484088 PTGR2Q8N8N7 351 aaPredicted RBP2.59□□□□□ -1.99
ITGB1-213ENST00000484088 LINS1Q8NG48 757 aa2.59□□□□□ -1.99
ITGB1-213ENST00000484088 GADD45GIP1Q8TAE8 222 aaPredicted RBP2.59□□□□□ -1.99
ITGB1-213ENST00000484088 CPT1BQ92523 772 aa2.59□□□□□ -1.99
ITGB1-213ENST00000484088 AKAP1Q92667 903 aaKnown RBP eCLIP2.59□□□□□ -1.99
ITGB1-213ENST00000484088 USP13Q92995 863 aaPredicted RBP2.59□□□□□ -1.99
ITGB1-213ENST00000484088 C3orf49Q96BT1 292 aa2.59□□□□□ -1.99
ITGB1-213ENST00000484088 REXO5Q96IC2 774 aaKnown RBP2.59□□□□□ -1.99
ITGB1-213ENST00000484088 ZNF845Q96IR2 970 aaPredicted RBP2.59□□□□□ -1.99
ITGB1-213ENST00000484088 FAR2Q96K12 515 aa2.59□□□□□ -1.99
ITGB1-213ENST00000484088 TBATAQ96M53 351 aa2.59□□□□□ -1.99
ITGB1-213ENST00000484088 COG8Q96MW5 612 aa2.59□□□□□ -1.99
ITGB1-213ENST00000484088 CLSTN3Q9BQT9 956 aa2.59□□□□□ -1.99
ITGB1-213ENST00000484088 REEP2Q9BRK0 252 aa2.59□□□□□ -1.99
ITGB1-213ENST00000484088 DUSP26Q9BV47 211 aa2.59□□□□□ -1.99
ITGB1-213ENST00000484088 CINPQ9BW66 212 aaPredicted RBP2.59□□□□□ -1.99
ITGB1-213ENST00000484088 CHODLQ9H9P2 273 aa2.59□□□□□ -1.99
ITGB1-213ENST00000484088 USP29Q9HBJ7 922 aa2.59□□□□□ -1.99
ITGB1-213ENST00000484088 ADARB2Q9NS39 739 aaKnown RBP2.59□□□□□ -1.99
ITGB1-213ENST00000484088 PI4KBQ9UBF8 816 aa2.59□□□□□ -1.99
ITGB1-213ENST00000484088 ZNF69Q9UC07 566 aa2.59□□□□□ -1.99
ITGB1-213ENST00000484088 VPS4AQ9UN37 437 aa2.59□□□□□ -1.99
ITGB1-213ENST00000484088 SLC12A4Q9UP95 1085 aa2.59□□□□□ -1.99
ITGB1-213ENST00000484088 CRYL1Q9Y2S2 319 aa2.59□□□□□ -1.99
ITGB1-213ENST00000484088 FAM90A7PA6NKC0 464 aa2.58□□□□□ -2
ITGB1-213ENST00000484088 FAM90A22PA8MWA6 464 aa2.58□□□□□ -2
ITGB1-213ENST00000484088 FAM90A12PA8MX19 464 aa2.58□□□□□ -2
ITGB1-213ENST00000484088 FAM90A23PA8MXZ1 464 aa2.58□□□□□ -2
ITGB1-213ENST00000484088 BTBD19C9JJ37 291 aa2.58□□□□□ -2
ITGB1-213ENST00000484088 GRM8O00222 908 aa2.58□□□□□ -2
ITGB1-213ENST00000484088 HOXC11O43248 304 aaPredicted RBP2.58□□□□□ -2
ITGB1-213ENST00000484088 DHX16O60231 1041 aaKnown RBP2.58□□□□□ -2
ITGB1-213ENST00000484088 EXOC3O60645 756 aa2.58□□□□□ -2
ITGB1-213ENST00000484088 PROP1O75360 226 aa2.58□□□□□ -2
ITGB1-213ENST00000484088 KRT38O76015 456 aa2.58□□□□□ -2
ITGB1-213ENST00000484088 JTBO76095 146 aa2.58□□□□□ -2
ITGB1-213ENST00000484088 ARSAP15289 507 aa2.58□□□□□ -2
ITGB1-213ENST00000484088 RXRAP19793 462 aa2.58□□□□□ -2
ITGB1-213ENST00000484088 PRPH2P23942 346 aa2.58□□□□□ -2
ITGB1-213ENST00000484088 LIFRP42702 1097 aa2.58□□□□□ -2
ITGB1-213ENST00000484088 MAPK9P45984 424 aa2.58□□□□□ -2
ITGB1-213ENST00000484088 AARSP49588 968 aaKnown RBP eCLIP2.58□□□□□ -2
ITGB1-213ENST00000484088 MCM2P49736 904 aa2.58□□□□□ -2
ITGB1-213ENST00000484088 NR1H2P55055 460 aa2.58□□□□□ -2
ITGB1-213ENST00000484088 SHC2P98077 582 aa2.58□□□□□ -2
ITGB1-213ENST00000484088 B4GALNT1Q00973 533 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms