RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 MS4A13Q5J8X5 152 aa8.58□□□□□ -1.04
HDAC6-221ENST00000477561 NAA35Q5VZE5 725 aa8.58□□□□□ -1.04
HDAC6-221ENST00000477561 OLFML1Q6UWY5 402 aa8.58□□□□□ -1.04
HDAC6-221ENST00000477561 CHST9Q7L1S5 443 aa8.58□□□□□ -1.04
HDAC6-221ENST00000477561 BEND5Q7L4P6 421 aa8.58□□□□□ -1.04
HDAC6-221ENST00000477561 ARMCX6Q7L4S7 300 aa8.58□□□□□ -1.04
HDAC6-221ENST00000477561 CHSY1Q86X52 802 aa8.58□□□□□ -1.04
HDAC6-221ENST00000477561 ERICH1Q86X53 443 aa8.58□□□□□ -1.04
HDAC6-221ENST00000477561 LGI2Q8N0V4 545 aa8.58□□□□□ -1.04
HDAC6-221ENST00000477561 CARNMT1Q8N4J0 409 aa8.58□□□□□ -1.04
HDAC6-221ENST00000477561 DEFB119Q8N690 84 aa8.58□□□□□ -1.04
HDAC6-221ENST00000477561 OLIG1Q8TAK6 271 aa8.58□□□□□ -1.04
HDAC6-221ENST00000477561 EPS8L1Q8TE68 723 aa8.58□□□□□ -1.04
HDAC6-221ENST00000477561 CYB5D2Q8WUJ1 264 aa8.58□□□□□ -1.04
HDAC6-221ENST00000477561 UCMAQ8WVF2 138 aa8.58□□□□□ -1.04
HDAC6-221ENST00000477561 AZIN2Q96A70 460 aa8.58□□□□□ -1.04
HDAC6-221ENST00000477561 RMDN1Q96DB5 314 aa8.58□□□□□ -1.04
HDAC6-221ENST00000477561 ZC3H10Q96K80 434 aaKnown RBP8.58□□□□□ -1.04
HDAC6-221ENST00000477561 PRICKLE1Q96MT3 831 aaPredicted RBP8.58□□□□□ -1.04
HDAC6-221ENST00000477561 SLC2A13Q96QE2 648 aa8.58□□□□□ -1.04
HDAC6-221ENST00000477561 SPAG5Q96R06 1193 aa8.58□□□□□ -1.04
HDAC6-221ENST00000477561 ERGIC2Q96RQ1 377 aa8.58□□□□□ -1.04
HDAC6-221ENST00000477561 GABRG3Q99928 467 aa8.58□□□□□ -1.04
HDAC6-221ENST00000477561 TRIM62Q9BVG3 475 aa8.58□□□□□ -1.04
HDAC6-221ENST00000477561 CD93Q9NPY3 652 aa8.58□□□□□ -1.04
HDAC6-221ENST00000477561 SEMA4GQ9NTN9 838 aa8.58□□□□□ -1.04
HDAC6-221ENST00000477561 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.58□□□□□ -1.04
HDAC6-221ENST00000477561 ASNSD1Q9NWL6 643 aa8.58□□□□□ -1.04
HDAC6-221ENST00000477561 THAP10Q9P2Z0 257 aaPredicted RBP8.58□□□□□ -1.04
HDAC6-221ENST00000477561 MBD1Q9UIS9 605 aaPredicted RBP8.58□□□□□ -1.04
HDAC6-221ENST00000477561 FAM186AA6NE01 2351 aa8.58□□□□□ -1.04
HDAC6-221ENST00000477561 OTOGLQ3ZCN5 2332 aa8.58□□□□□ -1.04
HDAC6-221ENST00000477561 GVINP1Q7Z2Y8 2422 aa8.58□□□□□ -1.04
HDAC6-221ENST00000477561 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.57□□□□□ -1.04
HDAC6-221ENST00000477561 KCNU1A8MYU2 1149 aa8.57□□□□□ -1.04
HDAC6-221ENST00000477561 AKR1B15C9JRZ8 316 aaPredicted RBP8.57□□□□□ -1.04
HDAC6-221ENST00000477561 M0QYT0 321 aa8.57□□□□□ -1.04
HDAC6-221ENST00000477561 ZBTB24O43167 697 aaPredicted RBP8.57□□□□□ -1.04
HDAC6-221ENST00000477561 DAB1O75553 588 aa8.57□□□□□ -1.04
HDAC6-221ENST00000477561 RHOBTB1O94844 696 aa8.57□□□□□ -1.04
HDAC6-221ENST00000477561 EPN2O95208 641 aa8.57□□□□□ -1.04
HDAC6-221ENST00000477561 IGLV3-25P01717 112 aa8.57□□□□□ -1.04
HDAC6-221ENST00000477561 PABPC1P11940 636 aaKnown RBP8.57□□□□□ -1.04
HDAC6-221ENST00000477561 HLA-EP13747 358 aa8.57□□□□□ -1.04
HDAC6-221ENST00000477561 NDUFV2P19404 249 aa8.57□□□□□ -1.04
HDAC6-221ENST00000477561 TFE3P19532 575 aaPredicted RBP8.57□□□□□ -1.04
HDAC6-221ENST00000477561 TACR2P21452 398 aa8.57□□□□□ -1.04
HDAC6-221ENST00000477561 MSNP26038 577 aaKnown RBP8.57□□□□□ -1.04
HDAC6-221ENST00000477561 CDH5P33151 784 aaPredicted RBP8.57□□□□□ -1.04
HDAC6-221ENST00000477561 NOS2P35228 1153 aa8.57□□□□□ -1.04
HDAC6-221ENST00000477561 GGCXP38435 758 aa8.57□□□□□ -1.04
HDAC6-221ENST00000477561 P2RY2P41231 377 aa8.57□□□□□ -1.04
HDAC6-221ENST00000477561 STAT1P42224 750 aa8.57□□□□□ -1.04
HDAC6-221ENST00000477561 GABRB2P47870 512 aa8.57□□□□□ -1.04
HDAC6-221ENST00000477561 ID4P47928 161 aa8.57□□□□□ -1.04
HDAC6-221ENST00000477561 DHPSP49366 369 aaPredicted RBP8.57□□□□□ -1.04
HDAC6-221ENST00000477561 SULT1E1P49888 294 aa8.57□□□□□ -1.04
HDAC6-221ENST00000477561 SNX16P57768 344 aa8.57□□□□□ -1.04
HDAC6-221ENST00000477561 CREB5Q02930 508 aa8.57□□□□□ -1.04
HDAC6-221ENST00000477561 TBX2Q13207 712 aaPredicted RBP8.57□□□□□ -1.04
HDAC6-221ENST00000477561 NNTQ13423 1086 aa8.57□□□□□ -1.04
HDAC6-221ENST00000477561 EIF4EBP2Q13542 120 aaPredicted RBP8.57□□□□□ -1.04
HDAC6-221ENST00000477561 SF3A2Q15428 464 aaKnown RBP8.57□□□□□ -1.04
HDAC6-221ENST00000477561 ELF2Q15723 593 aa8.57□□□□□ -1.04
HDAC6-221ENST00000477561 RSPO4Q2I0M5 234 aaPredicted RBP8.57□□□□□ -1.04
HDAC6-221ENST00000477561 MAP7D1Q3KQU3 841 aa8.57□□□□□ -1.04
HDAC6-221ENST00000477561 FUT11Q495W5 492 aa8.57□□□□□ -1.04
HDAC6-221ENST00000477561 FAM102AQ5T9C2 384 aaPredicted RBP8.57□□□□□ -1.04
HDAC6-221ENST00000477561 MBLAC2Q68D91 279 aa8.57□□□□□ -1.04
HDAC6-221ENST00000477561 SMYD5Q6GMV2 418 aa8.57□□□□□ -1.04
HDAC6-221ENST00000477561 KIAA1324Q6UXG2 1013 aaKnown RBP8.57□□□□□ -1.04
HDAC6-221ENST00000477561 MMS22LQ6ZRQ5 1243 aa8.57□□□□□ -1.04
HDAC6-221ENST00000477561 SLC26A9Q7LBE3 791 aa8.57□□□□□ -1.04
HDAC6-221ENST00000477561 ADIPOR2Q86V24 386 aa8.57□□□□□ -1.04
HDAC6-221ENST00000477561 ZSCAN30Q86W11 494 aa8.57□□□□□ -1.04
HDAC6-221ENST00000477561 CIR1Q86X95 450 aaPredicted RBP8.57□□□□□ -1.04
HDAC6-221ENST00000477561 CACUL1Q86Y37 369 aa8.57□□□□□ -1.04
HDAC6-221ENST00000477561 XYLT1Q86Y38 959 aa8.57□□□□□ -1.04
HDAC6-221ENST00000477561 CNGA4Q8IV77 575 aa8.57□□□□□ -1.04
HDAC6-221ENST00000477561 MFN1Q8IWA4 741 aa8.57□□□□□ -1.04
HDAC6-221ENST00000477561 TMEFF1Q8IYR6 380 aa8.57□□□□□ -1.04
HDAC6-221ENST00000477561 GPR161Q8N6U8 529 aaKnown RBP8.57□□□□□ -1.04
HDAC6-221ENST00000477561 ZNF366Q8N895 744 aa8.57□□□□□ -1.04
HDAC6-221ENST00000477561 ATP6V0D2Q8N8Y2 350 aa8.57□□□□□ -1.04
HDAC6-221ENST00000477561 HJURPQ8NCD3 748 aaPredicted RBP8.57□□□□□ -1.04
HDAC6-221ENST00000477561 CCDC112Q8NEF3 446 aa8.57□□□□□ -1.04
HDAC6-221ENST00000477561 C18orf8Q96DM3 657 aa8.57□□□□□ -1.04
HDAC6-221ENST00000477561 DDX50Q9BQ39 737 aaKnown RBP8.57□□□□□ -1.04
HDAC6-221ENST00000477561 ADAM33Q9BZ11 813 aa8.57□□□□□ -1.04
HDAC6-221ENST00000477561 CD248Q9HCU0 757 aa8.57□□□□□ -1.04
HDAC6-221ENST00000477561 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.57□□□□□ -1.04
HDAC6-221ENST00000477561 CALCOCO1Q9P1Z2 691 aa8.57□□□□□ -1.04
HDAC6-221ENST00000477561 SLC12A6Q9UHW9 1150 aa8.57□□□□□ -1.04
HDAC6-221ENST00000477561 GGA2Q9UJY4 613 aa8.57□□□□□ -1.04
HDAC6-221ENST00000477561 NOCTQ9UK39 431 aaKnown RBP8.57□□□□□ -1.04
HDAC6-221ENST00000477561 CYP8B1Q9UNU6 501 aa8.57□□□□□ -1.04
HDAC6-221ENST00000477561 EML5Q05BV3 1969 aa8.57□□□□□ -1.04
HDAC6-221ENST00000477561 DMXL1Q9Y485 3027 aa8.56□□□□□ -1.04
HDAC6-221ENST00000477561 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.56□□□□□ -1.04
HDAC6-221ENST00000477561 TYW5A2RUC4 315 aaKnown RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms