RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	PHLDB2	Q86SQ0	1253 aa		13.21	□□□□□ -0.29
FDPS-204	ENST00000461507	TMEM110	Q86TL2	294 aa		13.21	□□□□□ -0.29
FDPS-204	ENST00000461507	SYT12	Q8IV01	421 aa		13.21	□□□□□ -0.29
FDPS-204	ENST00000461507	CHPF	Q8IZ52	775 aa		13.21	□□□□□ -0.29
FDPS-204	ENST00000461507	WDTC1	Q8N5D0	677 aa		13.21	□□□□□ -0.29
FDPS-204	ENST00000461507	DQX1	Q8TE96	717 aa	Known RBP	13.21	□□□□□ -0.29
FDPS-204	ENST00000461507	CPLX3	Q8WVH0	158 aa		13.21	□□□□□ -0.29
FDPS-204	ENST00000461507	PIWIL1	Q96J94	861 aa	Known RBP	13.21	□□□□□ -0.29
FDPS-204	ENST00000461507	CNTNAP3B	Q96NU0	1288 aa		13.21	□□□□□ -0.29
FDPS-204	ENST00000461507	SERPINB11	Q96P15	392 aa		13.21	□□□□□ -0.29
FDPS-204	ENST00000461507	C11orf70	Q9BRQ4	267 aa		13.21	□□□□□ -0.29
FDPS-204	ENST00000461507	CNTNAP3	Q9BZ76	1288 aa		13.21	□□□□□ -0.29
FDPS-204	ENST00000461507	POPDC2	Q9HBU9	364 aa		13.21	□□□□□ -0.29
FDPS-204	ENST00000461507	AGO1	Q9UL18	857 aa	Known RBP	13.21	□□□□□ -0.29
FDPS-204	ENST00000461507	HBS1L	Q9Y450	684 aa	Known RBP	13.21	□□□□□ -0.29
FDPS-204	ENST00000461507	IGHV1OR15-9	A0A0B4J2B8	117 aa		13.2	□□□□□ -0.3
FDPS-204	ENST00000461507	PATE3	B3GLJ2	98 aa		13.2	□□□□□ -0.3
FDPS-204	ENST00000461507	CDX4	O14627	284 aa	Predicted RBP	13.2	□□□□□ -0.3
FDPS-204	ENST00000461507	TSPAN3	O60637	253 aa		13.2	□□□□□ -0.3
FDPS-204	ENST00000461507	HSF2BP	O75031	334 aa		13.2	□□□□□ -0.3
FDPS-204	ENST00000461507	ZNF217	O75362	1048 aa		13.2	□□□□□ -0.3
FDPS-204	ENST00000461507	KCNK5	O95279	499 aa		13.2	□□□□□ -0.3
FDPS-204	ENST00000461507	LATS1	O95835	1130 aa		13.2	□□□□□ -0.3
FDPS-204	ENST00000461507	APOE	P02649	317 aa		13.2	□□□□□ -0.3
FDPS-204	ENST00000461507	CYBB	P04839	570 aa		13.2	□□□□□ -0.3
FDPS-204	ENST00000461507	C7	P10643	843 aa		13.2	□□□□□ -0.3
FDPS-204	ENST00000461507	YWHAZ	P63104	245 aa	Known RBP	13.2	□□□□□ -0.3
FDPS-204	ENST00000461507	SHC2	P98077	582 aa		13.2	□□□□□ -0.3
FDPS-204	ENST00000461507	CDK17	Q00537	523 aa		13.2	□□□□□ -0.3
FDPS-204	ENST00000461507	FMO1	Q01740	532 aa		13.2	□□□□□ -0.3
FDPS-204	ENST00000461507	NR1I3	Q14994	352 aa		13.2	□□□□□ -0.3
FDPS-204	ENST00000461507	EIF4H	Q15056	248 aa	Known RBP	13.2	□□□□□ -0.3
FDPS-204	ENST00000461507	TDRD12	Q587J7	1177 aa	Known RBP	13.2	□□□□□ -0.3
FDPS-204	ENST00000461507	SFMBT2	Q5VUG0	894 aa		13.2	□□□□□ -0.3
FDPS-204	ENST00000461507	LYSMD4	Q5XG99	296 aa		13.2	□□□□□ -0.3
FDPS-204	ENST00000461507	MSANTD2	Q6P1R3	559 aa		13.2	□□□□□ -0.3
FDPS-204	ENST00000461507	MMS22L	Q6ZRQ5	1243 aa		13.2	□□□□□ -0.3
FDPS-204	ENST00000461507	METTL3	Q86U44	580 aa	Known RBP	13.2	□□□□□ -0.3
FDPS-204	ENST00000461507	TAC4	Q86UU9	113 aa		13.2	□□□□□ -0.3
FDPS-204	ENST00000461507	DEFB106A	Q8N104	65 aa		13.2	□□□□□ -0.3
FDPS-204	ENST00000461507	SLC30A5	Q8TAD4	765 aa		13.2	□□□□□ -0.3
FDPS-204	ENST00000461507	PIGK	Q92643	395 aa		13.2	□□□□□ -0.3
FDPS-204	ENST00000461507	C18orf8	Q96DM3	657 aa		13.2	□□□□□ -0.3
FDPS-204	ENST00000461507	SLC2A11	Q9BYW1	496 aa		13.2	□□□□□ -0.3
FDPS-204	ENST00000461507	XPO4	Q9C0E2	1151 aa	Known RBP	13.2	□□□□□ -0.3
FDPS-204	ENST00000461507	TMEM9B	Q9NQ34	198 aa		13.2	□□□□□ -0.3
FDPS-204	ENST00000461507	PLK2	Q9NYY3	685 aa		13.2	□□□□□ -0.3
FDPS-204	ENST00000461507	THAP10	Q9P2Z0	257 aa	Predicted RBP	13.2	□□□□□ -0.3
FDPS-204	ENST00000461507	NOCT	Q9UK39	431 aa	Known RBP	13.2	□□□□□ -0.3
FDPS-204	ENST00000461507	PILRB	Q9UKJ0	227 aa		13.2	□□□□□ -0.3
FDPS-204	ENST00000461507	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		13.19	□□□□□ -0.3
FDPS-204	ENST00000461507	C4orf47	A7E2U8	309 aa		13.19	□□□□□ -0.3
FDPS-204	ENST00000461507	TMCO5B	A8MYB1	307 aa		13.19	□□□□□ -0.3
FDPS-204	ENST00000461507	AP5Z1	O43299	807 aa		13.19	□□□□□ -0.3
FDPS-204	ENST00000461507	DAB1	O75553	588 aa		13.19	□□□□□ -0.3
FDPS-204	ENST00000461507	CSRP1	P21291	193 aa	Known RBP	13.19	□□□□□ -0.3
FDPS-204	ENST00000461507	TNFAIP3	P21580	790 aa		13.19	□□□□□ -0.3
FDPS-204	ENST00000461507	WAS	P42768	502 aa		13.19	□□□□□ -0.3
FDPS-204	ENST00000461507	SULT1E1	P49888	294 aa		13.19	□□□□□ -0.3
FDPS-204	ENST00000461507	ZNF445	P59923	1031 aa		13.19	□□□□□ -0.3
FDPS-204	ENST00000461507	NOMO3	P69849	1222 aa		13.19	□□□□□ -0.3
FDPS-204	ENST00000461507	IRX4	P78413	519 aa		13.19	□□□□□ -0.3
FDPS-204	ENST00000461507	SLC6A3	Q01959	620 aa		13.19	□□□□□ -0.3
FDPS-204	ENST00000461507	LMAN2	Q12907	356 aa		13.19	□□□□□ -0.3
FDPS-204	ENST00000461507	NME3	Q13232	169 aa		13.19	□□□□□ -0.3
FDPS-204	ENST00000461507	GEN1	Q17RS7	908 aa		13.19	□□□□□ -0.3
FDPS-204	ENST00000461507	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	13.19	□□□□□ -0.3
FDPS-204	ENST00000461507	DAB2IP	Q5VWQ8	1189 aa		13.19	□□□□□ -0.3
FDPS-204	ENST00000461507	SYPL2	Q5VXT5	272 aa		13.19	□□□□□ -0.3
FDPS-204	ENST00000461507	SMYD5	Q6GMV2	418 aa		13.19	□□□□□ -0.3
FDPS-204	ENST00000461507	SDE2	Q6IQ49	451 aa		13.19	□□□□□ -0.3
FDPS-204	ENST00000461507	SLC23A3	Q6PIS1	610 aa		13.19	□□□□□ -0.3
FDPS-204	ENST00000461507	OLFML1	Q6UWY5	402 aa		13.19	□□□□□ -0.3
FDPS-204	ENST00000461507	TRIM72	Q6ZMU5	477 aa		13.19	□□□□□ -0.3
FDPS-204	ENST00000461507	ANKS1B	Q7Z6G8	1248 aa		13.19	□□□□□ -0.3
FDPS-204	ENST00000461507	TMEFF1	Q8IYR6	380 aa		13.19	□□□□□ -0.3
FDPS-204	ENST00000461507	ZNF397	Q8NF99	534 aa	Predicted RBP	13.19	□□□□□ -0.3
FDPS-204	ENST00000461507	DDI1	Q8WTU0	396 aa		13.19	□□□□□ -0.3
FDPS-204	ENST00000461507	MRGPRX1	Q96LB2	322 aa		13.19	□□□□□ -0.3
FDPS-204	ENST00000461507	AGPAT1	Q99943	283 aa		13.19	□□□□□ -0.3
FDPS-204	ENST00000461507	NUP58	Q9BVL2	599 aa		13.19	□□□□□ -0.3
FDPS-204	ENST00000461507	IRX2	Q9BZI1	471 aa	Predicted RBP	13.19	□□□□□ -0.3
FDPS-204	ENST00000461507	TMEM74B	Q9NUR3	256 aa		13.19	□□□□□ -0.3
FDPS-204	ENST00000461507	DDIT4	Q9NX09	232 aa		13.19	□□□□□ -0.3
FDPS-204	ENST00000461507	CACNA2D2	Q9NY47	1150 aa		13.19	□□□□□ -0.3
FDPS-204	ENST00000461507	LAMA1	P25391	3075 aa		13.19	□□□□□ -0.3
FDPS-204	ENST00000461507	ADAMTS9	Q9P2N4	1935 aa		13.18	□□□□□ -0.3
FDPS-204	ENST00000461507	MAP3K13	O43283	966 aa		13.18	□□□□□ -0.3
FDPS-204	ENST00000461507	TRUB2	O95900	331 aa	Known RBP	13.18	□□□□□ -0.3
FDPS-204	ENST00000461507	IGLV3-27	P01718	113 aa		13.18	□□□□□ -0.3
FDPS-204	ENST00000461507	CHRNB2	P17787	502 aa		13.18	□□□□□ -0.3
FDPS-204	ENST00000461507	HOXD9	P28356	352 aa	Predicted RBP	13.18	□□□□□ -0.3
FDPS-204	ENST00000461507	RPL34	P49207	117 aa	Known RBP	13.18	□□□□□ -0.3
FDPS-204	ENST00000461507	SLC11A2	P49281	568 aa		13.18	□□□□□ -0.3
FDPS-204	ENST00000461507	KLHL30	Q0D2K2	578 aa		13.18	□□□□□ -0.3
FDPS-204	ENST00000461507	E2F5	Q15329	346 aa		13.18	□□□□□ -0.3
FDPS-204	ENST00000461507	TRIM61	Q5EBN2	209 aa		13.18	□□□□□ -0.3
FDPS-204	ENST00000461507	NUGGC	Q68CJ6	796 aa		13.18	□□□□□ -0.3
FDPS-204	ENST00000461507	ARMCX6	Q7L4S7	300 aa		13.18	□□□□□ -0.3
FDPS-204	ENST00000461507	RABEPK	Q7Z6M1	372 aa		13.18	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms