RNA–Protein interactions for RNA: ENST00000457748.1

GTF3C2-208, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5

Gene GTF3C2, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-208ENST00000457748 BRD9Q9H8M2 597 aa12.87□□□□□ -0.35
GTF3C2-208ENST00000457748 KLHL11Q9NVR0 708 aa12.87□□□□□ -0.35
GTF3C2-208ENST00000457748 VANGL2Q9ULK5 521 aa12.87□□□□□ -0.35
GTF3C2-208ENST00000457748 PACSIN2Q9UNF0 486 aaPredicted RBP12.87□□□□□ -0.35
GTF3C2-208ENST00000457748 DOCK8Q8NF50 2099 aa12.87□□□□□ -0.35
GTF3C2-208ENST00000457748 CTAGE9A4FU28 777 aa12.86□□□□□ -0.35
GTF3C2-208ENST00000457748 E9PAM4 449 aa12.86□□□□□ -0.35
GTF3C2-208ENST00000457748 PI4K2BG5E9Z4 385 aa12.86□□□□□ -0.35
GTF3C2-208ENST00000457748 ENC1O14682 589 aa12.86□□□□□ -0.35
GTF3C2-208ENST00000457748 TRDMT1O14717 391 aaKnown RBP12.86□□□□□ -0.35
GTF3C2-208ENST00000457748 CHADO15335 359 aa12.86□□□□□ -0.35
GTF3C2-208ENST00000457748 GREM1O60565 184 aa12.86□□□□□ -0.35
GTF3C2-208ENST00000457748 TUBB4AP04350 444 aa12.86□□□□□ -0.35
GTF3C2-208ENST00000457748 CASQ1P31415 396 aa12.86□□□□□ -0.35
GTF3C2-208ENST00000457748 GGCXP38435 758 aa12.86□□□□□ -0.35
GTF3C2-208ENST00000457748 VCPP55072 806 aaKnown RBP12.86□□□□□ -0.35
GTF3C2-208ENST00000457748 NRG1Q02297 640 aaPredicted RBP12.86□□□□□ -0.35
GTF3C2-208ENST00000457748 FCHO2Q0JRZ9 810 aa12.86□□□□□ -0.35
GTF3C2-208ENST00000457748 DPYSL2Q16555 572 aa12.86□□□□□ -0.35
GTF3C2-208ENST00000457748 ANO4Q32M45 955 aa12.86□□□□□ -0.35
GTF3C2-208ENST00000457748 ATP13A4Q4VNC1 1196 aa12.86□□□□□ -0.35
GTF3C2-208ENST00000457748 MPPE1Q53F39 396 aa12.86□□□□□ -0.35
GTF3C2-208ENST00000457748 FAM133BQ5BKY9 247 aaKnown RBP12.86□□□□□ -0.35
GTF3C2-208ENST00000457748 TTC39BQ5VTQ0 682 aaPredicted RBP12.86□□□□□ -0.35
GTF3C2-208ENST00000457748 NADSYN1Q6IA69 706 aa12.86□□□□□ -0.35
GTF3C2-208ENST00000457748 TPGS1Q6ZTW0 290 aa12.86□□□□□ -0.35
GTF3C2-208ENST00000457748 PYROXD2Q8N2H3 581 aa12.86□□□□□ -0.35
GTF3C2-208ENST00000457748 CPXM2Q8N436 756 aa12.86□□□□□ -0.35
GTF3C2-208ENST00000457748 EXD1Q8NHP7 514 aa12.86□□□□□ -0.35
GTF3C2-208ENST00000457748 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.86□□□□□ -0.35
GTF3C2-208ENST00000457748 KRT35Q92764 455 aa12.86□□□□□ -0.35
GTF3C2-208ENST00000457748 HES6Q96HZ4 224 aa12.86□□□□□ -0.35
GTF3C2-208ENST00000457748 LRRC3BQ96PB8 259 aa12.86□□□□□ -0.35
GTF3C2-208ENST00000457748 NAPGQ99747 312 aaPredicted RBP12.86□□□□□ -0.35
GTF3C2-208ENST00000457748 PLA2G2FQ9BZM2 168 aa12.86□□□□□ -0.35
GTF3C2-208ENST00000457748 LINC00597Q9H2U6 94 aa12.86□□□□□ -0.35
GTF3C2-208ENST00000457748 CATSPERBQ9H7T0 1116 aa12.86□□□□□ -0.35
GTF3C2-208ENST00000457748 KCNK12Q9HB15 430 aa12.86□□□□□ -0.35
GTF3C2-208ENST00000457748 ANLNQ9NQW6 1124 aa12.86□□□□□ -0.35
GTF3C2-208ENST00000457748 SPHK2Q9NRA0 654 aa12.86□□□□□ -0.35
GTF3C2-208ENST00000457748 DONSONQ9NYP3 566 aa12.86□□□□□ -0.35
GTF3C2-208ENST00000457748 STOML2Q9UJZ1 356 aa12.86□□□□□ -0.35
GTF3C2-208ENST00000457748 SNX10Q9Y5X0 201 aa12.86□□□□□ -0.35
GTF3C2-208ENST00000457748 C5orf42Q9H799 3197 aa12.85□□□□□ -0.35
GTF3C2-208ENST00000457748 KCNK3O14649 394 aa12.85□□□□□ -0.35
GTF3C2-208ENST00000457748 FGF10O15520 208 aaPredicted RBP12.85□□□□□ -0.35
GTF3C2-208ENST00000457748 TBL1XO60907 577 aa12.85□□□□□ -0.35
GTF3C2-208ENST00000457748 KDELR1P24390 212 aa12.85□□□□□ -0.35
GTF3C2-208ENST00000457748 EPHB2P29323 1055 aa12.85□□□□□ -0.35
GTF3C2-208ENST00000457748 MARCKSL1P49006 195 aa12.85□□□□□ -0.35
GTF3C2-208ENST00000457748 ETF1P62495 437 aaKnown RBP12.85□□□□□ -0.35
GTF3C2-208ENST00000457748 CA9Q16790 459 aa12.85□□□□□ -0.35
GTF3C2-208ENST00000457748 SEL1L2Q5TEA6 688 aa12.85□□□□□ -0.35
GTF3C2-208ENST00000457748 FBXL22Q6P050 247 aa12.85□□□□□ -0.35
GTF3C2-208ENST00000457748 CYP4V2Q6ZWL3 525 aaPredicted RBP12.85□□□□□ -0.35
GTF3C2-208ENST00000457748 RIN3Q8TB24 985 aa12.85□□□□□ -0.35
GTF3C2-208ENST00000457748 RSAD2Q8WXG1 361 aa12.85□□□□□ -0.35
GTF3C2-208ENST00000457748 RAPGEF5Q92565 580 aa12.85□□□□□ -0.35
GTF3C2-208ENST00000457748 IRF7Q92985 503 aa12.85□□□□□ -0.35
GTF3C2-208ENST00000457748 BHMTQ93088 406 aa12.85□□□□□ -0.35
GTF3C2-208ENST00000457748 RNF25Q96BH1 459 aaPredicted RBP12.85□□□□□ -0.35
GTF3C2-208ENST00000457748 ZFYVE19Q96K21 471 aa12.85□□□□□ -0.35
GTF3C2-208ENST00000457748 PRMT1Q99873 361 aaKnown RBP12.85□□□□□ -0.35
GTF3C2-208ENST00000457748 BBS2Q9BXC9 721 aa12.85□□□□□ -0.35
GTF3C2-208ENST00000457748 ZYG11BQ9C0D3 744 aa12.85□□□□□ -0.35
GTF3C2-208ENST00000457748 EBF3Q9H4W6 596 aa12.85□□□□□ -0.35
GTF3C2-208ENST00000457748 PCDH18Q9HCL0 1135 aa12.85□□□□□ -0.35
GTF3C2-208ENST00000457748 RCOR3Q9P2K3 495 aaPredicted RBP12.85□□□□□ -0.35
GTF3C2-208ENST00000457748 DNAI1Q9UI46 699 aa12.85□□□□□ -0.35
GTF3C2-208ENST00000457748 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.84□□□□□ -0.35
GTF3C2-208ENST00000457748 LOC730098B7Z3J9 87 aa12.84□□□□□ -0.35
GTF3C2-208ENST00000457748 NEDD8-MDP1E9PL57 170 aa12.84□□□□□ -0.35
GTF3C2-208ENST00000457748 FAM72CH0Y354 149 aa12.84□□□□□ -0.35
GTF3C2-208ENST00000457748 I6L893 689 aaPredicted RBP12.84□□□□□ -0.35
GTF3C2-208ENST00000457748 DDX3YO15523 660 aaKnown RBP12.84□□□□□ -0.35
GTF3C2-208ENST00000457748 CLDN11O75508 207 aa12.84□□□□□ -0.35
GTF3C2-208ENST00000457748 LRIG2O94898 1065 aa12.84□□□□□ -0.35
GTF3C2-208ENST00000457748 ASGR2P07307 311 aa12.84□□□□□ -0.35
GTF3C2-208ENST00000457748 ADH5P11766 374 aa12.84□□□□□ -0.35
GTF3C2-208ENST00000457748 GOT1P17174 413 aa12.84□□□□□ -0.35
GTF3C2-208ENST00000457748 SLC6A4P31645 630 aa12.84□□□□□ -0.35
GTF3C2-208ENST00000457748 HCAR3P49019 387 aa12.84□□□□□ -0.35
GTF3C2-208ENST00000457748 COPS2P61201 443 aa12.84□□□□□ -0.35
GTF3C2-208ENST00000457748 AMPD2Q01433 879 aa12.84□□□□□ -0.35
GTF3C2-208ENST00000457748 GAD2Q05329 585 aa12.84□□□□□ -0.35
GTF3C2-208ENST00000457748 ZP2Q05996 745 aa12.84□□□□□ -0.35
GTF3C2-208ENST00000457748 ZNF177Q13360 481 aaPredicted RBP12.84□□□□□ -0.35
GTF3C2-208ENST00000457748 DPYSL3Q14195 570 aa12.84□□□□□ -0.35
GTF3C2-208ENST00000457748 EML3Q32P44 896 aa12.84□□□□□ -0.35
GTF3C2-208ENST00000457748 LY6G5CQ5SRR4 150 aa12.84□□□□□ -0.35
GTF3C2-208ENST00000457748 CCDC181Q5TID7 509 aa12.84□□□□□ -0.35
GTF3C2-208ENST00000457748 FAM72AQ5TYM5 149 aa12.84□□□□□ -0.35
GTF3C2-208ENST00000457748 TRIM68Q6AZZ1 485 aa12.84□□□□□ -0.35
GTF3C2-208ENST00000457748 FAM72DQ6L9T8 149 aa12.84□□□□□ -0.35
GTF3C2-208ENST00000457748 SYT10Q6XYQ8 523 aa12.84□□□□□ -0.35
GTF3C2-208ENST00000457748 RFX8Q6ZV50 586 aa12.84□□□□□ -0.35
GTF3C2-208ENST00000457748 C14orf80Q86SX3 495 aa12.84□□□□□ -0.35
GTF3C2-208ENST00000457748 FAM72BQ86X60 149 aa12.84□□□□□ -0.35
GTF3C2-208ENST00000457748 RFX6Q8HWS3 928 aa12.84□□□□□ -0.35
GTF3C2-208ENST00000457748 FAM217AQ8IXS0 508 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms