RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 LLGL2Q6P1M3 1020 aa11.01□□□□□ -0.65
LINC00342-202ENST00000448494 SNX32Q86XE0 403 aa11.01□□□□□ -0.65
LINC00342-202ENST00000448494 LINC00518Q8N0U6 118 aa11.01□□□□□ -0.65
LINC00342-202ENST00000448494 REXO1Q8N1G1 1221 aaKnown RBP11.01□□□□□ -0.65
LINC00342-202ENST00000448494 PARP8Q8N3A8 854 aa11.01□□□□□ -0.65
LINC00342-202ENST00000448494 LNX1Q8TBB1 728 aaPredicted RBP11.01□□□□□ -0.65
LINC00342-202ENST00000448494 SERPINI1Q99574 410 aa11.01□□□□□ -0.65
LINC00342-202ENST00000448494 TMEM246Q9BRR3 403 aa11.01□□□□□ -0.65
LINC00342-202ENST00000448494 VPS33BQ9H267 617 aa11.01□□□□□ -0.65
LINC00342-202ENST00000448494 ADNPQ9H2P0 1102 aa11.01□□□□□ -0.65
LINC00342-202ENST00000448494 ATP13A3Q9H7F0 1226 aa11.01□□□□□ -0.65
LINC00342-202ENST00000448494 MRPL39Q9NYK5 338 aaKnown RBP11.01□□□□□ -0.65
LINC00342-202ENST00000448494 TAS2R7Q9NYW3 318 aa11.01□□□□□ -0.65
LINC00342-202ENST00000448494 IGSF9BQ9UPX0 1349 aa11.01□□□□□ -0.65
LINC00342-202ENST00000448494 MYH14Q7Z406 1995 aaKnown RBP11.01□□□□□ -0.65
LINC00342-202ENST00000448494 RTL9Q8NET4 1388 aa11.01□□□□□ -0.65
LINC00342-202ENST00000448494 ANKRD62A6NC57 917 aa11.01□□□□□ -0.65
LINC00342-202ENST00000448494 KPNA6O60684 536 aa11.01□□□□□ -0.65
LINC00342-202ENST00000448494 CCNKO75909 580 aa11.01□□□□□ -0.65
LINC00342-202ENST00000448494 IMPDH1P20839 514 aa11.01□□□□□ -0.65
LINC00342-202ENST00000448494 RACK1P63244 317 aaKnown RBP11.01□□□□□ -0.65
LINC00342-202ENST00000448494 GHRHRQ02643 423 aa11.01□□□□□ -0.65
LINC00342-202ENST00000448494 FUT2Q10981 343 aa11.01□□□□□ -0.65
LINC00342-202ENST00000448494 IKBKEQ14164 716 aa11.01□□□□□ -0.65
LINC00342-202ENST00000448494 PFKFB3Q16875 520 aaPredicted RBP11.01□□□□□ -0.65
LINC00342-202ENST00000448494 GSTA5Q7RTV2 222 aa11.01□□□□□ -0.65
LINC00342-202ENST00000448494 CCDC60Q8IWA6 550 aaPredicted RBP11.01□□□□□ -0.65
LINC00342-202ENST00000448494 CHCHD4Q8N4Q1 142 aa11.01□□□□□ -0.65
LINC00342-202ENST00000448494 PIK3R3Q92569 461 aa11.01□□□□□ -0.65
LINC00342-202ENST00000448494 DCPSQ96C86 337 aaKnown RBP11.01□□□□□ -0.65
LINC00342-202ENST00000448494 PWWP2AQ96N64 755 aa11.01□□□□□ -0.65
LINC00342-202ENST00000448494 PLIN2Q99541 437 aa11.01□□□□□ -0.65
LINC00342-202ENST00000448494 TMEM121Q9BTD3 319 aa11.01□□□□□ -0.65
LINC00342-202ENST00000448494 CHID1Q9BWS9 393 aa11.01□□□□□ -0.65
LINC00342-202ENST00000448494 XPO7Q9UIA9 1087 aaKnown RBP11.01□□□□□ -0.65
LINC00342-202ENST00000448494 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.01□□□□□ -0.65
LINC00342-202ENST00000448494 TYW5A2RUC4 315 aaKnown RBP11□□□□□ -0.65
LINC00342-202ENST00000448494 C16orf96A6NNT2 1141 aa11□□□□□ -0.65
LINC00342-202ENST00000448494 C12orf71A8MTZ7 269 aa11□□□□□ -0.65
LINC00342-202ENST00000448494 E5RJQ4 531 aa11□□□□□ -0.65
LINC00342-202ENST00000448494 TRAF5O00463 557 aa11□□□□□ -0.65
LINC00342-202ENST00000448494 FSCN2O14926 492 aa11□□□□□ -0.65
LINC00342-202ENST00000448494 RNGTTO60942 597 aaKnown RBP11□□□□□ -0.65
LINC00342-202ENST00000448494 FGF18O76093 207 aa11□□□□□ -0.65
LINC00342-202ENST00000448494 GSNP06396 782 aa11□□□□□ -0.65
LINC00342-202ENST00000448494 GYS1P13807 737 aa11□□□□□ -0.65
LINC00342-202ENST00000448494 ATF4P18848 351 aaPredicted RBP11□□□□□ -0.65
LINC00342-202ENST00000448494 EPHA3P29320 983 aa11□□□□□ -0.65
LINC00342-202ENST00000448494 GRIA3P42263 894 aa11□□□□□ -0.65
LINC00342-202ENST00000448494 AQP5P55064 265 aa11□□□□□ -0.65
LINC00342-202ENST00000448494 TIMM10P62072 90 aa11□□□□□ -0.65
LINC00342-202ENST00000448494 PRAMEP78395 509 aa11□□□□□ -0.65
LINC00342-202ENST00000448494 FAAP100Q0VG06 881 aa11□□□□□ -0.65
LINC00342-202ENST00000448494 VPS72Q15906 364 aa11□□□□□ -0.65
LINC00342-202ENST00000448494 ESCO2Q56NI9 601 aa11□□□□□ -0.65
LINC00342-202ENST00000448494 FSCBQ5H9T9 825 aa11□□□□□ -0.65
LINC00342-202ENST00000448494 DBX2Q6ZNG2 339 aa11□□□□□ -0.65
LINC00342-202ENST00000448494 ZNF677Q86XU0 584 aa11□□□□□ -0.65
LINC00342-202ENST00000448494 TPH2Q8IWU9 490 aa11□□□□□ -0.65
LINC00342-202ENST00000448494 NDUFAF2Q8N183 169 aa11□□□□□ -0.65
LINC00342-202ENST00000448494 PSD4Q8NDX1 1056 aa11□□□□□ -0.65
LINC00342-202ENST00000448494 DACT3Q96B18 629 aaPredicted RBP11□□□□□ -0.65
LINC00342-202ENST00000448494 INTS12Q96CB8 462 aaKnown RBP11□□□□□ -0.65
LINC00342-202ENST00000448494 RILPQ96NA2 401 aa11□□□□□ -0.65
LINC00342-202ENST00000448494 SAMD11Q96NU1 681 aa11□□□□□ -0.65
LINC00342-202ENST00000448494 SENP7Q9BQF6 1050 aa11□□□□□ -0.65
LINC00342-202ENST00000448494 ZSCAN5AQ9BUG6 496 aa11□□□□□ -0.65
LINC00342-202ENST00000448494 DDX24Q9GZR7 859 aaKnown RBP eCLIP11□□□□□ -0.65
LINC00342-202ENST00000448494 NAA50Q9GZZ1 169 aaKnown RBP11□□□□□ -0.65
LINC00342-202ENST00000448494 POLR1BQ9H9Y6 1135 aa11□□□□□ -0.65
LINC00342-202ENST00000448494 IP6K2Q9UHH9 426 aa11□□□□□ -0.65
LINC00342-202ENST00000448494 SLC27A5Q9Y2P5 690 aa11□□□□□ -0.65
LINC00342-202ENST00000448494 TIAM2Q8IVF5 1701 aa11□□□□□ -0.65
LINC00342-202ENST00000448494 NFASCO94856 1347 aa11□□□□□ -0.65
LINC00342-202ENST00000448494 PI4K2BG5E9Z4 385 aa10.99□□□□□ -0.65
LINC00342-202ENST00000448494 GAS2O43903 313 aaKnown RBP10.99□□□□□ -0.65
LINC00342-202ENST00000448494 LPXNO60711 386 aa10.99□□□□□ -0.65
LINC00342-202ENST00000448494 PRDM1O75626 825 aa10.99□□□□□ -0.65
LINC00342-202ENST00000448494 OR7A10O76100 309 aa10.99□□□□□ -0.65
LINC00342-202ENST00000448494 ALDH1A2O94788 518 aa10.99□□□□□ -0.65
LINC00342-202ENST00000448494 MFN2O95140 757 aa10.99□□□□□ -0.65
LINC00342-202ENST00000448494 PIK3R1P27986 724 aa10.99□□□□□ -0.65
LINC00342-202ENST00000448494 PSMC2P35998 433 aaKnown RBP10.99□□□□□ -0.65
LINC00342-202ENST00000448494 TALDO1P37837 337 aa10.99□□□□□ -0.65
LINC00342-202ENST00000448494 IL15P40933 162 aaPredicted RBP10.99□□□□□ -0.65
LINC00342-202ENST00000448494 GRM5P41594 1212 aa10.99□□□□□ -0.65
LINC00342-202ENST00000448494 MARCKSL1P49006 195 aa10.99□□□□□ -0.65
LINC00342-202ENST00000448494 CLCNKBP51801 687 aa10.99□□□□□ -0.65
LINC00342-202ENST00000448494 GPLD1P80108 840 aa10.99□□□□□ -0.65
LINC00342-202ENST00000448494 MRPS22P82650 360 aaKnown RBP10.99□□□□□ -0.65
LINC00342-202ENST00000448494 PDIA2Q13087 525 aaKnown RBP10.99□□□□□ -0.65
LINC00342-202ENST00000448494 NAB1Q13506 487 aa10.99□□□□□ -0.65
LINC00342-202ENST00000448494 CCDC142Q17RM4 750 aa10.99□□□□□ -0.65
LINC00342-202ENST00000448494 DALRD3Q5D0E6 543 aaKnown RBP10.99□□□□□ -0.65
LINC00342-202ENST00000448494 TTC33Q6PID6 262 aaPredicted RBP10.99□□□□□ -0.65
LINC00342-202ENST00000448494 LYPD8Q6UX82 237 aa10.99□□□□□ -0.65
LINC00342-202ENST00000448494 BEND5Q7L4P6 421 aa10.99□□□□□ -0.65
LINC00342-202ENST00000448494 ARID3BQ8IVW6 561 aaPredicted RBP10.99□□□□□ -0.65
LINC00342-202ENST00000448494 OR13F1Q8NGS4 319 aa10.99□□□□□ -0.65
LINC00342-202ENST00000448494 SLC7A3Q8WY07 619 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms