RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 ZC3H12AQ5D1E8 599 aaKnown RBP18.23■□□□□ 0.51
NUP50-208ENST00000430547 MS4A13Q5J8X5 152 aa18.23■□□□□ 0.51
NUP50-208ENST00000430547 TMEM215Q68D42 235 aa18.23■□□□□ 0.51
NUP50-208ENST00000430547 MBLAC2Q68D91 279 aa18.23■□□□□ 0.51
NUP50-208ENST00000430547 RNF43Q68DV7 783 aa18.23■□□□□ 0.51
NUP50-208ENST00000430547 CHSY1Q86X52 802 aa18.23■□□□□ 0.51
NUP50-208ENST00000430547 ZDHHC17Q8IUH5 632 aa18.23■□□□□ 0.51
NUP50-208ENST00000430547 DEFB106AQ8N104 65 aa18.23■□□□□ 0.51
NUP50-208ENST00000430547 CARNMT1Q8N4J0 409 aa18.23■□□□□ 0.51
NUP50-208ENST00000430547 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.23■□□□□ 0.51
NUP50-208ENST00000430547 MSANTD4Q8NCY6 345 aa18.23■□□□□ 0.51
NUP50-208ENST00000430547 PRICKLE1Q96MT3 831 aaPredicted RBP18.23■□□□□ 0.51
NUP50-208ENST00000430547 EDEM2Q9BV94 578 aa18.23■□□□□ 0.51
NUP50-208ENST00000430547 STK33Q9BYT3 514 aa18.23■□□□□ 0.51
NUP50-208ENST00000430547 NUCKS1Q9H1E3 243 aaKnown RBP18.23■□□□□ 0.51
NUP50-208ENST00000430547 FANCLQ9NW38 375 aa18.23■□□□□ 0.51
NUP50-208ENST00000430547 DNAH14Q0VDD8 3507 aa18.23■□□□□ 0.51
NUP50-208ENST00000430547 F5H5T6 163 aa18.22■□□□□ 0.51
NUP50-208ENST00000430547 F8VZ95 297 aa18.22■□□□□ 0.51
NUP50-208ENST00000430547 ACADMP11310 421 aa18.22■□□□□ 0.51
NUP50-208ENST00000430547 PRKCHP24723 683 aa18.22■□□□□ 0.51
NUP50-208ENST00000430547 CCR1P32246 355 aa18.22■□□□□ 0.51
NUP50-208ENST00000430547 RPS24P62847 133 aaKnown RBP18.22■□□□□ 0.51
NUP50-208ENST00000430547 SLC6A3Q01959 620 aa18.22■□□□□ 0.51
NUP50-208ENST00000430547 PTPN20Q4JDL3 420 aa18.22■□□□□ 0.51
NUP50-208ENST00000430547 STPG1Q5TH74 334 aa18.22■□□□□ 0.51
NUP50-208ENST00000430547 TAF3Q5VWG9 929 aa18.22■□□□□ 0.51
NUP50-208ENST00000430547 RAP1GAP2Q684P5 730 aa18.22■□□□□ 0.51
NUP50-208ENST00000430547 OLFML1Q6UWY5 402 aa18.22■□□□□ 0.51
NUP50-208ENST00000430547 SYT12Q8IV01 421 aa18.22■□□□□ 0.51
NUP50-208ENST00000430547 LGI2Q8N0V4 545 aa18.22■□□□□ 0.51
NUP50-208ENST00000430547 WFDC5Q8TCV5 224 aa18.22■□□□□ 0.51
NUP50-208ENST00000430547 CYB5D2Q8WUJ1 264 aa18.22■□□□□ 0.51
NUP50-208ENST00000430547 DDX1Q92499 740 aaKnown RBP18.22■□□□□ 0.51
NUP50-208ENST00000430547 PRCCQ92733 491 aaPredicted RBP18.22■□□□□ 0.51
NUP50-208ENST00000430547 PCMTD1Q96MG8 357 aaPredicted RBP18.22■□□□□ 0.51
NUP50-208ENST00000430547 SLC2A13Q96QE2 648 aa18.22■□□□□ 0.51
NUP50-208ENST00000430547 NAA15Q9BXJ9 866 aaKnown RBP18.22■□□□□ 0.51
NUP50-208ENST00000430547 RXFP3Q9NSD7 469 aa18.22■□□□□ 0.51
NUP50-208ENST00000430547 LAMA1P25391 3075 aa18.22■□□□□ 0.51
NUP50-208ENST00000430547 GON4LQ3T8J9 2241 aa18.22■□□□□ 0.51
NUP50-208ENST00000430547 KCNU1A8MYU2 1149 aa18.21■□□□□ 0.51
NUP50-208ENST00000430547 H0Y626 953 aa18.21■□□□□ 0.51
NUP50-208ENST00000430547 DAB1O75553 588 aa18.21■□□□□ 0.51
NUP50-208ENST00000430547 MOCS3O95396 460 aa18.21■□□□□ 0.51
NUP50-208ENST00000430547 IGLV3-25P01717 112 aa18.21■□□□□ 0.51
NUP50-208ENST00000430547 DLDP09622 509 aaKnown RBP18.21■□□□□ 0.51
NUP50-208ENST00000430547 CDK11BP21127 795 aaKnown RBP18.21■□□□□ 0.51
NUP50-208ENST00000430547 TACR2P21452 398 aa18.21■□□□□ 0.51
NUP50-208ENST00000430547 KCNA4P22459 653 aa18.21■□□□□ 0.51
NUP50-208ENST00000430547 CD70P32970 193 aa18.21■□□□□ 0.51
NUP50-208ENST00000430547 ST8SIA6P61647 398 aa18.21■□□□□ 0.51
NUP50-208ENST00000430547 PITX1P78337 314 aaPredicted RBP18.21■□□□□ 0.51
NUP50-208ENST00000430547 DPY19L2P1Q6NXN4 242 aa18.21■□□□□ 0.51
NUP50-208ENST00000430547 SLC26A9Q7LBE3 791 aa18.21■□□□□ 0.51
NUP50-208ENST00000430547 KIAA0907Q7Z7F0 614 aaPredicted RBP18.21■□□□□ 0.51
NUP50-208ENST00000430547 ADIPOR2Q86V24 386 aa18.21■□□□□ 0.51
NUP50-208ENST00000430547 TMPRSS6Q8IU80 811 aa18.21■□□□□ 0.51
NUP50-208ENST00000430547 CFAP52Q8N1V2 620 aa18.21■□□□□ 0.51
NUP50-208ENST00000430547 DEFB119Q8N690 84 aa18.21■□□□□ 0.51
NUP50-208ENST00000430547 FIBINQ8TAL6 211 aa18.21■□□□□ 0.51
NUP50-208ENST00000430547 SIPA1Q96FS4 1042 aa18.21■□□□□ 0.51
NUP50-208ENST00000430547 NUSAP1Q9BXS6 441 aaKnown RBP18.21■□□□□ 0.51
NUP50-208ENST00000430547 MKRN2Q9H000 416 aaKnown RBP18.21■□□□□ 0.51
NUP50-208ENST00000430547 FAM207AQ9NSI2 230 aaPredicted RBP18.21■□□□□ 0.51
NUP50-208ENST00000430547 XPO7Q9UIA9 1087 aaKnown RBP18.21■□□□□ 0.51
NUP50-208ENST00000430547 ATXN2Q99700 1313 aaKnown RBP18.21■□□□□ 0.51
NUP50-208ENST00000430547 NYNRINQ9P2P1 1898 aaKnown RBP18.2■□□□□ 0.5
NUP50-208ENST00000430547 LNP1A1A4G5 178 aa18.2■□□□□ 0.5
NUP50-208ENST00000430547 LUC7L3O95232 432 aaKnown RBP18.2■□□□□ 0.5
NUP50-208ENST00000430547 LSM8O95777 96 aaKnown RBP18.2■□□□□ 0.5
NUP50-208ENST00000430547 HLA-EP13747 358 aa18.2■□□□□ 0.5
NUP50-208ENST00000430547 NOS2P35228 1153 aa18.2■□□□□ 0.5
NUP50-208ENST00000430547 ZNF33AQ06730 810 aa18.2■□□□□ 0.5
NUP50-208ENST00000430547 NME3Q13232 169 aa18.2■□□□□ 0.5
NUP50-208ENST00000430547 MTA1Q13330 715 aa18.2■□□□□ 0.5
NUP50-208ENST00000430547 TRIM61Q5EBN2 209 aa18.2■□□□□ 0.5
NUP50-208ENST00000430547 RABGAP1LQ5R372 815 aa18.2■□□□□ 0.5
NUP50-208ENST00000430547 METTL3Q86U44 580 aaKnown RBP18.2■□□□□ 0.5
NUP50-208ENST00000430547 ERICH1Q86X53 443 aa18.2■□□□□ 0.5
NUP50-208ENST00000430547 CACUL1Q86Y37 369 aa18.2■□□□□ 0.5
NUP50-208ENST00000430547 C18orf8Q96DM3 657 aa18.2■□□□□ 0.5
NUP50-208ENST00000430547 HSPA12BQ96MM6 686 aa18.2■□□□□ 0.5
NUP50-208ENST00000430547 SPAG5Q96R06 1193 aa18.2■□□□□ 0.5
NUP50-208ENST00000430547 GANQ9H2C0 597 aa18.2■□□□□ 0.5
NUP50-208ENST00000430547 RRN3Q9NYV6 651 aa18.2■□□□□ 0.5
NUP50-208ENST00000430547 STAP1Q9ULZ2 295 aa18.2■□□□□ 0.5
NUP50-208ENST00000430547 DAAM1Q9Y4D1 1078 aa18.2■□□□□ 0.5
NUP50-208ENST00000430547 ADAMTS9Q9P2N4 1935 aa18.19■□□□□ 0.5
NUP50-208ENST00000430547 MED19A0JLT2 244 aaPredicted RBP18.19■□□□□ 0.5
NUP50-208ENST00000430547 PATE3B3GLJ2 98 aa18.19■□□□□ 0.5
NUP50-208ENST00000430547 ASLP04424 464 aa18.19■□□□□ 0.5
NUP50-208ENST00000430547 CFIP05156 583 aa18.19■□□□□ 0.5
NUP50-208ENST00000430547 ITPKAP23677 461 aa18.19■□□□□ 0.5
NUP50-208ENST00000430547 CD6P30203 668 aa18.19■□□□□ 0.5
NUP50-208ENST00000430547 CDH5P33151 784 aaPredicted RBP18.19■□□□□ 0.5
NUP50-208ENST00000430547 HOXD12P35452 270 aa18.19■□□□□ 0.5
NUP50-208ENST00000430547 COPB1P53618 953 aaKnown RBP18.19■□□□□ 0.5
NUP50-208ENST00000430547 RNASE9P60153 205 aaKnown RBP18.19■□□□□ 0.5
NUP50-208ENST00000430547 POLR2FP61218 127 aaKnown RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms