RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 OLFM2O95897 454 aa10.8□□□□□ -0.68
COL5A1-202ENST00000371820 OAS1P00973 400 aaKnown RBP10.8□□□□□ -0.68
COL5A1-202ENST00000371820 CD58P19256 250 aa10.8□□□□□ -0.68
COL5A1-202ENST00000371820 DRD1P21728 446 aa10.8□□□□□ -0.68
COL5A1-202ENST00000371820 ADORA2BP29275 332 aa10.8□□□□□ -0.68
COL5A1-202ENST00000371820 LSP1P33241 339 aa10.8□□□□□ -0.68
COL5A1-202ENST00000371820 HSD17B3P37058 310 aa10.8□□□□□ -0.68
COL5A1-202ENST00000371820 CXCL12P48061 93 aa10.8□□□□□ -0.68
COL5A1-202ENST00000371820 CACNA2D1P54289 1103 aa10.8□□□□□ -0.68
COL5A1-202ENST00000371820 SLC8A3P57103 927 aa10.8□□□□□ -0.68
COL5A1-202ENST00000371820 BPIFB4P59827 614 aa10.8□□□□□ -0.68
COL5A1-202ENST00000371820 PPP2R2AP63151 447 aa10.8□□□□□ -0.68
COL5A1-202ENST00000371820 ARHGAP8P85298 464 aa10.8□□□□□ -0.68
COL5A1-202ENST00000371820 CAV1Q03135 178 aa10.8□□□□□ -0.68
COL5A1-202ENST00000371820 PON2Q15165 354 aa10.8□□□□□ -0.68
COL5A1-202ENST00000371820 FBXO43Q4G163 708 aa10.8□□□□□ -0.68
COL5A1-202ENST00000371820 TTMPQ5BVD1 217 aa10.8□□□□□ -0.68
COL5A1-202ENST00000371820 HECTD3Q5T447 861 aa10.8□□□□□ -0.68
COL5A1-202ENST00000371820 SEL1L2Q5TEA6 688 aa10.8□□□□□ -0.68
COL5A1-202ENST00000371820 LAIR1Q6GTX8 287 aa10.8□□□□□ -0.68
COL5A1-202ENST00000371820 Q6ZS52 159 aa10.8□□□□□ -0.68
COL5A1-202ENST00000371820 TTC16Q8NEE8 873 aa10.8□□□□□ -0.68
COL5A1-202ENST00000371820 TTC8Q8TAM2 541 aa10.8□□□□□ -0.68
COL5A1-202ENST00000371820 ARL8AQ96BM9 186 aa10.8□□□□□ -0.68
COL5A1-202ENST00000371820 GDAP1L1Q96MZ0 367 aa10.8□□□□□ -0.68
COL5A1-202ENST00000371820 CYP2S1Q96SQ9 504 aa10.8□□□□□ -0.68
COL5A1-202ENST00000371820 KCNK16Q96T55 309 aa10.8□□□□□ -0.68
COL5A1-202ENST00000371820 HNRNPABQ99729 332 aaKnown RBP10.8□□□□□ -0.68
COL5A1-202ENST00000371820 TACO1Q9BSH4 297 aaKnown RBP10.8□□□□□ -0.68
COL5A1-202ENST00000371820 NACA2Q9H009 215 aa10.8□□□□□ -0.68
COL5A1-202ENST00000371820 ECT2Q9H8V3 914 aa10.8□□□□□ -0.68
COL5A1-202ENST00000371820 APOBEC3GQ9HC16 384 aaKnown RBP10.8□□□□□ -0.68
COL5A1-202ENST00000371820 HPS4Q9NQG7 708 aa10.8□□□□□ -0.68
COL5A1-202ENST00000371820 TLR8Q9NR97 1041 aaKnown RBP10.8□□□□□ -0.68
COL5A1-202ENST00000371820 FAM49BQ9NUQ9 324 aa10.8□□□□□ -0.68
COL5A1-202ENST00000371820 IL37Q9NZH6 218 aa10.8□□□□□ -0.68
COL5A1-202ENST00000371820 TBC1D14Q9P2M4 693 aa10.8□□□□□ -0.68
COL5A1-202ENST00000371820 HMGXB4Q9UGU5 601 aa10.8□□□□□ -0.68
COL5A1-202ENST00000371820 PCYOX1Q9UHG3 505 aa10.8□□□□□ -0.68
COL5A1-202ENST00000371820 RAB23Q9ULC3 237 aa10.8□□□□□ -0.68
COL5A1-202ENST00000371820 COQ4Q9Y3A0 265 aa10.8□□□□□ -0.68
COL5A1-202ENST00000371820 ANAPC1Q9H1A4 1944 aa10.8□□□□□ -0.68
COL5A1-202ENST00000371820 FAM92AA1XBS5 289 aa10.79□□□□□ -0.68
COL5A1-202ENST00000371820 K7ESF4 209 aa10.79□□□□□ -0.68
COL5A1-202ENST00000371820 LEFTY2O00292 366 aa10.79□□□□□ -0.68
COL5A1-202ENST00000371820 TRDMT1O14717 391 aaKnown RBP10.79□□□□□ -0.68
COL5A1-202ENST00000371820 TNFRSF10BO14763 440 aa10.79□□□□□ -0.68
COL5A1-202ENST00000371820 PPFIA2O75334 1257 aa10.79□□□□□ -0.68
COL5A1-202ENST00000371820 PAEPP09466 180 aa10.79□□□□□ -0.68
COL5A1-202ENST00000371820 NUDT17P0C025 328 aa10.79□□□□□ -0.68
COL5A1-202ENST00000371820 MBL2P11226 248 aaPredicted RBP10.79□□□□□ -0.68
COL5A1-202ENST00000371820 ARSAP15289 507 aa10.79□□□□□ -0.68
COL5A1-202ENST00000371820 TBXAS1P24557 533 aaPredicted RBP10.79□□□□□ -0.68
COL5A1-202ENST00000371820 CETN2P41208 172 aa10.79□□□□□ -0.68
COL5A1-202ENST00000371820 PSEN1P49768 467 aa10.79□□□□□ -0.68
COL5A1-202ENST00000371820 ATXN1P54253 815 aaKnown RBP10.79□□□□□ -0.68
COL5A1-202ENST00000371820 MAP3K7CLP57077 242 aa10.79□□□□□ -0.68
COL5A1-202ENST00000371820 DR1Q01658 176 aa10.79□□□□□ -0.68
COL5A1-202ENST00000371820 ADCY2Q08462 1091 aa10.79□□□□□ -0.68
COL5A1-202ENST00000371820 DMWDQ09019 674 aa10.79□□□□□ -0.68
COL5A1-202ENST00000371820 ORC1Q13415 861 aa10.79□□□□□ -0.68
COL5A1-202ENST00000371820 LPAL2Q16609 132 aa10.79□□□□□ -0.68
COL5A1-202ENST00000371820 TMEM196Q5HYL7 178 aa10.79□□□□□ -0.68
COL5A1-202ENST00000371820 SNX30Q5VWJ9 437 aa10.79□□□□□ -0.68
COL5A1-202ENST00000371820 TRIM68Q6AZZ1 485 aa10.79□□□□□ -0.68
COL5A1-202ENST00000371820 PAQR9Q6ZVX9 377 aa10.79□□□□□ -0.68
COL5A1-202ENST00000371820 TAOK1Q7L7X3 1001 aa10.79□□□□□ -0.68
COL5A1-202ENST00000371820 NLRP14Q86W24 1093 aa10.79□□□□□ -0.68
COL5A1-202ENST00000371820 ZNF677Q86XU0 584 aa10.79□□□□□ -0.68
COL5A1-202ENST00000371820 GSPT2Q8IYD1 628 aaKnown RBP10.79□□□□□ -0.68
COL5A1-202ENST00000371820 C12orf29Q8N999 325 aa10.79□□□□□ -0.68
COL5A1-202ENST00000371820 BBOF1Q8ND07 529 aa10.79□□□□□ -0.68
COL5A1-202ENST00000371820 UBLCP1Q8WVY7 318 aaPredicted RBP10.79□□□□□ -0.68
COL5A1-202ENST00000371820 ELMO3Q96BJ8 720 aa10.79□□□□□ -0.68
COL5A1-202ENST00000371820 PGM2Q96G03 612 aa10.79□□□□□ -0.68
COL5A1-202ENST00000371820 SLC22A12Q96S37 553 aa10.79□□□□□ -0.68
COL5A1-202ENST00000371820 FMO2Q99518 471 aa10.79□□□□□ -0.68
COL5A1-202ENST00000371820 SMOQ99835 787 aa10.79□□□□□ -0.68
COL5A1-202ENST00000371820 PLCD4Q9BRC7 762 aa10.79□□□□□ -0.68
COL5A1-202ENST00000371820 PACSIN1Q9BY11 444 aa10.79□□□□□ -0.68
COL5A1-202ENST00000371820 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.79□□□□□ -0.68
COL5A1-202ENST00000371820 TMEM51Q9NW97 253 aa10.79□□□□□ -0.68
COL5A1-202ENST00000371820 CDV3Q9UKY7 258 aaKnown RBP10.79□□□□□ -0.68
COL5A1-202ENST00000371820 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.79□□□□□ -0.68
COL5A1-202ENST00000371820 SH3BP1Q9Y3L3 701 aa10.79□□□□□ -0.68
COL5A1-202ENST00000371820 CPQQ9Y646 472 aa10.79□□□□□ -0.68
COL5A1-202ENST00000371820 WNT6Q9Y6F9 365 aa10.79□□□□□ -0.68
COL5A1-202ENST00000371820 SPTBN2O15020 2390 aa10.79□□□□□ -0.68
COL5A1-202ENST00000371820 CHURC1-FNTBB4DL54 471 aa10.78□□□□□ -0.68
COL5A1-202ENST00000371820 LRP3O75074 770 aa10.78□□□□□ -0.68
COL5A1-202ENST00000371820 PHF2O75151 1096 aa10.78□□□□□ -0.68
COL5A1-202ENST00000371820 FSBPO95073 299 aa10.78□□□□□ -0.68
COL5A1-202ENST00000371820 FGGP02679 453 aa10.78□□□□□ -0.68
COL5A1-202ENST00000371820 RETP07949 1114 aa10.78□□□□□ -0.68
COL5A1-202ENST00000371820 MYBL1P10243 752 aa10.78□□□□□ -0.68
COL5A1-202ENST00000371820 CTNNA2P26232 953 aa10.78□□□□□ -0.68
COL5A1-202ENST00000371820 CNR2P34972 360 aa10.78□□□□□ -0.68
COL5A1-202ENST00000371820 GJA4P35212 333 aa10.78□□□□□ -0.68
COL5A1-202ENST00000371820 FNTBP49356 437 aa10.78□□□□□ -0.68
COL5A1-202ENST00000371820 SPEM2Q0P670 501 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms