RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 HEPHQ9BQS7 1158 aa11.99□□□□□ -0.49
SMARCA1-201ENST00000371121 WDR55Q9H6Y2 383 aaPredicted RBP11.99□□□□□ -0.49
SMARCA1-201ENST00000371121 RPF2Q9H7B2 306 aaKnown RBP11.99□□□□□ -0.49
SMARCA1-201ENST00000371121 RAB6BQ9NRW1 208 aa11.99□□□□□ -0.49
SMARCA1-201ENST00000371121 ARHGAP26Q9UNA1 814 aa11.99□□□□□ -0.49
SMARCA1-201ENST00000371121 TMEM98Q9Y2Y6 226 aa11.99□□□□□ -0.49
SMARCA1-201ENST00000371121 IKBKGQ9Y6K9 419 aa11.99□□□□□ -0.49
SMARCA1-201ENST00000371121 FAM155AB1AL88 458 aaPredicted RBP11.99□□□□□ -0.49
SMARCA1-201ENST00000371121 G3V2L1 256 aa11.99□□□□□ -0.49
SMARCA1-201ENST00000371121 H3BMQ9 156 aa11.99□□□□□ -0.49
SMARCA1-201ENST00000371121 TRDMT1O14717 391 aaKnown RBP11.99□□□□□ -0.49
SMARCA1-201ENST00000371121 BCAS2O75934 225 aaPredicted RBP11.99□□□□□ -0.49
SMARCA1-201ENST00000371121 FGFR3P22607 806 aa11.99□□□□□ -0.49
SMARCA1-201ENST00000371121 ATP2B4P23634 1241 aa11.99□□□□□ -0.49
SMARCA1-201ENST00000371121 ZNF394Q53GI3 561 aa11.99□□□□□ -0.49
SMARCA1-201ENST00000371121 TMEM198Q66K66 360 aa11.99□□□□□ -0.49
SMARCA1-201ENST00000371121 BTLAQ7Z6A9 289 aa11.99□□□□□ -0.49
SMARCA1-201ENST00000371121 TNS4Q8IZW8 715 aa11.99□□□□□ -0.49
SMARCA1-201ENST00000371121 TMEM151AQ8N4L1 468 aa11.99□□□□□ -0.49
SMARCA1-201ENST00000371121 PLD5Q8N7P1 536 aa11.99□□□□□ -0.49
SMARCA1-201ENST00000371121 DEPTORQ8TB45 409 aa11.99□□□□□ -0.49
SMARCA1-201ENST00000371121 PIWIL1Q96J94 861 aaKnown RBP11.99□□□□□ -0.49
SMARCA1-201ENST00000371121 COG8Q96MW5 612 aa11.99□□□□□ -0.49
SMARCA1-201ENST00000371121 NCKIPSDQ9NZQ3 722 aa11.99□□□□□ -0.49
SMARCA1-201ENST00000371121 SLC9A2Q9UBY0 812 aa11.99□□□□□ -0.49
SMARCA1-201ENST00000371121 PCSK1NQ9UHG2 260 aa11.99□□□□□ -0.49
SMARCA1-201ENST00000371121 COQ6Q9Y2Z9 468 aa11.99□□□□□ -0.49
SMARCA1-201ENST00000371121 RIMBP2O15034 1052 aa11.99□□□□□ -0.49
SMARCA1-201ENST00000371121 NUDT2P50583 147 aa11.99□□□□□ -0.49
SMARCA1-201ENST00000371121 BCAP31P51572 246 aa11.99□□□□□ -0.49
SMARCA1-201ENST00000371121 EN1Q05925 392 aaPredicted RBP11.99□□□□□ -0.49
SMARCA1-201ENST00000371121 DENND1BQ6P3S1 775 aa11.99□□□□□ -0.49
SMARCA1-201ENST00000371121 DNAJC24Q6P3W2 148 aa11.99□□□□□ -0.49
SMARCA1-201ENST00000371121 CENPSQ8N2Z9 138 aa11.99□□□□□ -0.49
SMARCA1-201ENST00000371121 ADAMTS16Q8TE57 1224 aa11.99□□□□□ -0.49
SMARCA1-201ENST00000371121 SLC7A3Q8WY07 619 aa11.99□□□□□ -0.49
SMARCA1-201ENST00000371121 DCUN1D5Q9BTE7 237 aa11.99□□□□□ -0.49
SMARCA1-201ENST00000371121 GMPR2Q9P2T1 348 aaKnown RBP11.99□□□□□ -0.49
SMARCA1-201ENST00000371121 COPG2Q9UBF2 871 aa11.99□□□□□ -0.49
SMARCA1-201ENST00000371121 C9IYK1 514 aa11.98□□□□□ -0.49
SMARCA1-201ENST00000371121 AIM2O14862 343 aa11.98□□□□□ -0.49
SMARCA1-201ENST00000371121 GNPATO15228 680 aa11.98□□□□□ -0.49
SMARCA1-201ENST00000371121 SPAG6O75602 509 aa11.98□□□□□ -0.49
SMARCA1-201ENST00000371121 CSPG5O95196 566 aa11.98□□□□□ -0.49
SMARCA1-201ENST00000371121 GH2P01242 217 aa11.98□□□□□ -0.49
SMARCA1-201ENST00000371121 MIPP30301 263 aa11.98□□□□□ -0.49
SMARCA1-201ENST00000371121 HSD17B4P51659 736 aa11.98□□□□□ -0.49
SMARCA1-201ENST00000371121 ABCE1P61221 599 aaKnown RBP11.98□□□□□ -0.49
SMARCA1-201ENST00000371121 CRADDP78560 199 aa11.98□□□□□ -0.49
SMARCA1-201ENST00000371121 SMAD1Q15797 465 aaKnown RBP11.98□□□□□ -0.49
SMARCA1-201ENST00000371121 TKFCQ3LXA3 575 aa11.98□□□□□ -0.49
SMARCA1-201ENST00000371121 RARS2Q5T160 578 aaKnown RBP11.98□□□□□ -0.49
SMARCA1-201ENST00000371121 KCNT2Q6UVM3 1135 aa11.98□□□□□ -0.49
SMARCA1-201ENST00000371121 ZSCAN18Q8TBC5 510 aaPredicted RBP11.98□□□□□ -0.49
SMARCA1-201ENST00000371121 COX4I2Q96KJ9 171 aa11.98□□□□□ -0.49
SMARCA1-201ENST00000371121 CNDP1Q96KN2 507 aa11.98□□□□□ -0.49
SMARCA1-201ENST00000371121 CPXM1Q96SM3 734 aa11.98□□□□□ -0.49
SMARCA1-201ENST00000371121 MAGEB5Q9BZ81 275 aa11.98□□□□□ -0.49
SMARCA1-201ENST00000371121 CYP26B1Q9NR63 512 aa11.98□□□□□ -0.49
SMARCA1-201ENST00000371121 SPATA7Q9P0W8 599 aa11.98□□□□□ -0.49
SMARCA1-201ENST00000371121 AGTPBP1Q9UPW5 1226 aa11.98□□□□□ -0.49
SMARCA1-201ENST00000371121 PIK3R1P27986 724 aa11.98□□□□□ -0.49
SMARCA1-201ENST00000371121 RBL1P28749 1068 aa11.98□□□□□ -0.49
SMARCA1-201ENST00000371121 RPS3AP61247 264 aaKnown RBP11.98□□□□□ -0.49
SMARCA1-201ENST00000371121 NSUN2Q08J23 767 aaKnown RBP eCLIP11.98□□□□□ -0.49
SMARCA1-201ENST00000371121 IKQ13123 557 aaPredicted RBP11.98□□□□□ -0.49
SMARCA1-201ENST00000371121 PDAP1Q13442 181 aaKnown RBP11.98□□□□□ -0.49
SMARCA1-201ENST00000371121 FLOT2Q14254 428 aa11.98□□□□□ -0.49
SMARCA1-201ENST00000371121 HSP90AA5PQ58FG0 334 aa11.98□□□□□ -0.49
SMARCA1-201ENST00000371121 GPAT2Q6NUI2 795 aa11.98□□□□□ -0.49
SMARCA1-201ENST00000371121 CROCCP3Q8IVE0 287 aa11.98□□□□□ -0.49
SMARCA1-201ENST00000371121 C4orf19Q8IY42 314 aa11.98□□□□□ -0.49
SMARCA1-201ENST00000371121 SLC7A14Q8TBB6 771 aa11.98□□□□□ -0.49
SMARCA1-201ENST00000371121 LRTOMTQ8WZ04 291 aa11.98□□□□□ -0.49
SMARCA1-201ENST00000371121 FAF2Q96CS3 445 aa11.98□□□□□ -0.49
SMARCA1-201ENST00000371121 IFT122Q9HBG6 1241 aa11.98□□□□□ -0.49
SMARCA1-201ENST00000371121 FBXO28Q9NVF7 368 aa11.98□□□□□ -0.49
SMARCA1-201ENST00000371121 STYXL1Q9Y6J8 313 aa11.98□□□□□ -0.49
SMARCA1-201ENST00000371121 PSMD12O00232 456 aaPredicted RBP11.98□□□□□ -0.49
SMARCA1-201ENST00000371121 SOCS2O14508 198 aa11.98□□□□□ -0.49
SMARCA1-201ENST00000371121 ALDH1A2O94788 518 aa11.98□□□□□ -0.49
SMARCA1-201ENST00000371121 IL18RAPO95256 599 aa11.98□□□□□ -0.49
SMARCA1-201ENST00000371121 BMP10O95393 424 aa11.98□□□□□ -0.49
SMARCA1-201ENST00000371121 C8BP07358 591 aa11.98□□□□□ -0.49
SMARCA1-201ENST00000371121 SBK3P0C264 359 aa11.98□□□□□ -0.49
SMARCA1-201ENST00000371121 EPHX2P34913 555 aa11.98□□□□□ -0.49
SMARCA1-201ENST00000371121 ENPEPQ07075 957 aa11.98□□□□□ -0.49
SMARCA1-201ENST00000371121 MTX3Q5HYI7 312 aa11.98□□□□□ -0.49
SMARCA1-201ENST00000371121 SLC2A7Q6PXP3 512 aa11.98□□□□□ -0.49
SMARCA1-201ENST00000371121 TMEM179Q6ZVK1 233 aa11.98□□□□□ -0.49
SMARCA1-201ENST00000371121 SNX32Q86XE0 403 aa11.98□□□□□ -0.49
SMARCA1-201ENST00000371121 THNSL1Q8IYQ7 743 aa11.98□□□□□ -0.49
SMARCA1-201ENST00000371121 ACVR1CQ8NER5 493 aa11.98□□□□□ -0.49
SMARCA1-201ENST00000371121 NLRP7Q8WX94 980 aa11.98□□□□□ -0.49
SMARCA1-201ENST00000371121 RCN3Q96D15 328 aa11.98□□□□□ -0.49
SMARCA1-201ENST00000371121 GOLGA8QA0A0J9YX86 632 aa11.97□□□□□ -0.49
SMARCA1-201ENST00000371121 GOLGA8OA6NCC3 632 aa11.97□□□□□ -0.49
SMARCA1-201ENST00000371121 GOLGA8NF8WBI6 632 aa11.97□□□□□ -0.49
SMARCA1-201ENST00000371121 NFIBO00712 420 aa11.97□□□□□ -0.49
SMARCA1-201ENST00000371121 SERPINE1P05121 402 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms