RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 GREM1O60565 184 aa11.31□□□□□ -0.6
BRCC3-204ENST00000369462 CST8O60676 142 aa11.31□□□□□ -0.6
BRCC3-204ENST00000369462 FOSL2P15408 326 aa11.31□□□□□ -0.6
BRCC3-204ENST00000369462 AMPD1P23109 780 aa11.31□□□□□ -0.6
BRCC3-204ENST00000369462 EPHB2P29323 1055 aa11.31□□□□□ -0.6
BRCC3-204ENST00000369462 NADSYN1Q6IA69 706 aa11.31□□□□□ -0.6
BRCC3-204ENST00000369462 RWDD4Q6NW29 188 aaKnown RBP11.31□□□□□ -0.6
BRCC3-204ENST00000369462 RFX8Q6ZV50 586 aa11.31□□□□□ -0.6
BRCC3-204ENST00000369462 CHSY1Q86X52 802 aa11.31□□□□□ -0.6
BRCC3-204ENST00000369462 SMRP1Q8NCR6 262 aa11.31□□□□□ -0.6
BRCC3-204ENST00000369462 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.31□□□□□ -0.6
BRCC3-204ENST00000369462 GUCD1Q96NT3 240 aa11.31□□□□□ -0.6
BRCC3-204ENST00000369462 NAP1L3Q99457 506 aaPredicted RBP11.31□□□□□ -0.6
BRCC3-204ENST00000369462 AP1M1Q9BXS5 423 aa11.31□□□□□ -0.6
BRCC3-204ENST00000369462 LSM7Q9UK45 103 aaKnown RBP11.31□□□□□ -0.6
BRCC3-204ENST00000369462 NR2E1Q9Y466 385 aa11.31□□□□□ -0.6
BRCC3-204ENST00000369462 E9PAM4 449 aa11.31□□□□□ -0.6
BRCC3-204ENST00000369462 TJP3O95049 919 aa11.31□□□□□ -0.6
BRCC3-204ENST00000369462 MTA1Q13330 715 aa11.31□□□□□ -0.6
BRCC3-204ENST00000369462 FAM133BQ5BKY9 247 aaKnown RBP11.31□□□□□ -0.6
BRCC3-204ENST00000369462 ADGRF1Q5T601 910 aa11.31□□□□□ -0.6
BRCC3-204ENST00000369462 RFWD3Q6PCD5 774 aa11.31□□□□□ -0.6
BRCC3-204ENST00000369462 VSIG1Q86XK7 387 aa11.31□□□□□ -0.6
BRCC3-204ENST00000369462 ZDHHC14Q8IZN3 488 aa11.31□□□□□ -0.6
BRCC3-204ENST00000369462 CARD6Q9BX69 1037 aa11.31□□□□□ -0.6
BRCC3-204ENST00000369462 DCLK3Q9C098 648 aa11.31□□□□□ -0.6
BRCC3-204ENST00000369462 ARHGEF4Q9NR80 690 aa11.31□□□□□ -0.6
BRCC3-204ENST00000369462 STIM2Q9P246 746 aa11.31□□□□□ -0.6
BRCC3-204ENST00000369462 RCOR3Q9P2K3 495 aaPredicted RBP11.31□□□□□ -0.6
BRCC3-204ENST00000369462 EFR3BQ9Y2G0 817 aa11.31□□□□□ -0.6
BRCC3-204ENST00000369462 KRIT1O00522 736 aa11.3□□□□□ -0.6
BRCC3-204ENST00000369462 TRDMT1O14717 391 aaKnown RBP11.3□□□□□ -0.6
BRCC3-204ENST00000369462 KCNA5P22460 613 aa11.3□□□□□ -0.6
BRCC3-204ENST00000369462 SLC6A4P31645 630 aa11.3□□□□□ -0.6
BRCC3-204ENST00000369462 PTPN7P35236 360 aa11.3□□□□□ -0.6
BRCC3-204ENST00000369462 KLF1Q13351 362 aaPredicted RBP11.3□□□□□ -0.6
BRCC3-204ENST00000369462 TFDP2Q14188 446 aa11.3□□□□□ -0.6
BRCC3-204ENST00000369462 FBXL22Q6P050 247 aa11.3□□□□□ -0.6
BRCC3-204ENST00000369462 LRRC31Q6UY01 552 aa11.3□□□□□ -0.6
BRCC3-204ENST00000369462 PQLC3Q8N755 202 aa11.3□□□□□ -0.6
BRCC3-204ENST00000369462 ST13P5Q8NFI4 369 aaPredicted RBP11.3□□□□□ -0.6
BRCC3-204ENST00000369462 RIN3Q8TB24 985 aa11.3□□□□□ -0.6
BRCC3-204ENST00000369462 AZIN2Q96A70 460 aa11.3□□□□□ -0.6
BRCC3-204ENST00000369462 FAF2Q96CS3 445 aa11.3□□□□□ -0.6
BRCC3-204ENST00000369462 ETNK2Q9NVF9 386 aa11.3□□□□□ -0.6
BRCC3-204ENST00000369462 GDE1Q9NZC3 331 aa11.3□□□□□ -0.6
BRCC3-204ENST00000369462 SAE1Q9UBE0 346 aaPredicted RBP11.3□□□□□ -0.6
BRCC3-204ENST00000369462 ZNF487B1APH4 448 aa11.3□□□□□ -0.6
BRCC3-204ENST00000369462 ERCC2P18074 760 aa11.3□□□□□ -0.6
BRCC3-204ENST00000369462 TACR2P21452 398 aa11.3□□□□□ -0.6
BRCC3-204ENST00000369462 MTHFRP42898 656 aa11.3□□□□□ -0.6
BRCC3-204ENST00000369462 HCAR3P49019 387 aa11.3□□□□□ -0.6
BRCC3-204ENST00000369462 CKAP4Q07065 602 aaKnown RBP11.3□□□□□ -0.6
BRCC3-204ENST00000369462 FAM78AQ5JUQ0 283 aa11.3□□□□□ -0.6
BRCC3-204ENST00000369462 MANEALQ5VSG8 457 aa11.3□□□□□ -0.6
BRCC3-204ENST00000369462 HTR3DQ70Z44 454 aa11.3□□□□□ -0.6
BRCC3-204ENST00000369462 DDX42Q86XP3 938 aaKnown RBP eCLIP11.3□□□□□ -0.6
BRCC3-204ENST00000369462 BBS7Q8IWZ6 715 aa11.3□□□□□ -0.6
BRCC3-204ENST00000369462 HAUS1Q96CS2 278 aa11.3□□□□□ -0.6
BRCC3-204ENST00000369462 MYEOVQ96EZ4 313 aa11.3□□□□□ -0.6
BRCC3-204ENST00000369462 RPRD1AQ96P16 312 aaPredicted RBP11.3□□□□□ -0.6
BRCC3-204ENST00000369462 PRMT1Q99873 361 aaKnown RBP11.3□□□□□ -0.6
BRCC3-204ENST00000369462 POMKQ9H5K3 350 aa11.3□□□□□ -0.6
BRCC3-204ENST00000369462 MPP6Q9NZW5 540 aa11.3□□□□□ -0.6
BRCC3-204ENST00000369462 CD207Q9UJ71 328 aa11.3□□□□□ -0.6
BRCC3-204ENST00000369462 CDH7Q9ULB5 785 aa11.3□□□□□ -0.6
BRCC3-204ENST00000369462 F5H5T6 163 aa11.29□□□□□ -0.6
BRCC3-204ENST00000369462 VIPR2P41587 438 aa11.29□□□□□ -0.6
BRCC3-204ENST00000369462 ZNF135P52742 658 aaPredicted RBP11.29□□□□□ -0.6
BRCC3-204ENST00000369462 NRG1Q02297 640 aaPredicted RBP11.29□□□□□ -0.6
BRCC3-204ENST00000369462 DPYSQ14117 519 aa11.29□□□□□ -0.6
BRCC3-204ENST00000369462 ACBD5Q5T8D3 534 aaPredicted RBP11.29□□□□□ -0.6
BRCC3-204ENST00000369462 Q6ZNB5 142 aa11.29□□□□□ -0.6
BRCC3-204ENST00000369462 BBS12Q6ZW61 710 aa11.29□□□□□ -0.6
BRCC3-204ENST00000369462 LGI2Q8N0V4 545 aa11.29□□□□□ -0.6
BRCC3-204ENST00000369462 SPATA4Q8NEY3 305 aa11.29□□□□□ -0.6
BRCC3-204ENST00000369462 SMARCD2Q92925 531 aa11.29□□□□□ -0.6
BRCC3-204ENST00000369462 IGSF8Q969P0 613 aa11.29□□□□□ -0.6
BRCC3-204ENST00000369462 TBC1D31Q96DN5 1066 aa11.29□□□□□ -0.6
BRCC3-204ENST00000369462 ASB16Q96NS5 453 aa11.29□□□□□ -0.6
BRCC3-204ENST00000369462 FAM118BQ9BPY3 351 aa11.29□□□□□ -0.6
BRCC3-204ENST00000369462 USP15Q9Y4E8 981 aaPredicted RBP11.29□□□□□ -0.6
BRCC3-204ENST00000369462 E2F8A0AVK6 867 aa11.29□□□□□ -0.6
BRCC3-204ENST00000369462 APOL1O14791 398 aa11.29□□□□□ -0.6
BRCC3-204ENST00000369462 TSPAN3O60637 253 aa11.29□□□□□ -0.6
BRCC3-204ENST00000369462 GBP2P32456 591 aaPredicted RBP11.29□□□□□ -0.6
BRCC3-204ENST00000369462 IRAK1P51617 712 aa11.29□□□□□ -0.6
BRCC3-204ENST00000369462 VCPP55072 806 aaKnown RBP11.29□□□□□ -0.6
BRCC3-204ENST00000369462 ARTNQ5T4W7 220 aa11.29□□□□□ -0.6
BRCC3-204ENST00000369462 ZNF683Q8IZ20 524 aa11.29□□□□□ -0.6
BRCC3-204ENST00000369462 CFAP52Q8N1V2 620 aa11.29□□□□□ -0.6
BRCC3-204ENST00000369462 CELF5Q8N6W0 485 aaKnown RBP11.29□□□□□ -0.6
BRCC3-204ENST00000369462 PLD5Q8N7P1 536 aa11.29□□□□□ -0.6
BRCC3-204ENST00000369462 MNS1Q8NEH6 495 aa11.29□□□□□ -0.6
BRCC3-204ENST00000369462 MYADMQ96S97 322 aa11.29□□□□□ -0.6
BRCC3-204ENST00000369462 UBE2ZQ9H832 354 aaPredicted RBP11.29□□□□□ -0.6
BRCC3-204ENST00000369462 NEU3Q9UQ49 428 aa11.29□□□□□ -0.6
BRCC3-204ENST00000369462 R3HDM2Q9Y2K5 976 aaKnown RBP11.29□□□□□ -0.6
BRCC3-204ENST00000369462 MFHAS1Q9Y4C4 1052 aa11.29□□□□□ -0.6
BRCC3-204ENST00000369462 HEY1Q9Y5J3 304 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms