RNA–Protein interactions for RNA: ENST00000369091.6

PRDM1-202, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 2,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-202ENST00000369091 NCKIPSDQ9NZQ3 722 aa19.24■□□□□ 0.67
PRDM1-202ENST00000369091 TJP2Q9UDY2 1190 aa19.24■□□□□ 0.67
PRDM1-202ENST00000369091 TESPA1A2RU30 521 aaPredicted RBP19.23■□□□□ 0.67
PRDM1-202ENST00000369091 SLC15A5A6NIM6 579 aa19.23■□□□□ 0.67
PRDM1-202ENST00000369091 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.23■□□□□ 0.67
PRDM1-202ENST00000369091 VNN1O95497 513 aa19.23■□□□□ 0.67
PRDM1-202ENST00000369091 NDUFB10O96000 172 aa19.23■□□□□ 0.67
PRDM1-202ENST00000369091 TNNI1P19237 187 aa19.23■□□□□ 0.67
PRDM1-202ENST00000369091 RFC1P35251 1148 aaPredicted RBP19.23■□□□□ 0.67
PRDM1-202ENST00000369091 TUBA4AP68366 448 aa19.23■□□□□ 0.67
PRDM1-202ENST00000369091 GNA12Q03113 381 aa19.23■□□□□ 0.67
PRDM1-202ENST00000369091 PIGHQ14442 188 aaPredicted RBP19.23■□□□□ 0.67
PRDM1-202ENST00000369091 PPP1R2P3Q6NXS1 205 aa19.23■□□□□ 0.67
PRDM1-202ENST00000369091 B3GNT9Q6UX72 402 aa19.23■□□□□ 0.67
PRDM1-202ENST00000369091 SLC15A4Q8N697 577 aa19.23■□□□□ 0.67
PRDM1-202ENST00000369091 JOSD2Q8TAC2 188 aa19.23■□□□□ 0.67
PRDM1-202ENST00000369091 TRPC4APQ8TEL6 797 aa19.23■□□□□ 0.67
PRDM1-202ENST00000369091 ZNF606Q8WXB4 792 aa19.23■□□□□ 0.67
PRDM1-202ENST00000369091 MOCOSQ96EN8 888 aa19.23■□□□□ 0.67
PRDM1-202ENST00000369091 MARK4Q96L34 752 aa19.23■□□□□ 0.67
PRDM1-202ENST00000369091 DHRS1Q96LJ7 313 aa19.23■□□□□ 0.67
PRDM1-202ENST00000369091 ACO2Q99798 780 aaKnown RBP19.23■□□□□ 0.67
PRDM1-202ENST00000369091 OSBPL11Q9BXB4 747 aa19.23■□□□□ 0.67
PRDM1-202ENST00000369091 CALN1Q9BXU9 219 aa19.23■□□□□ 0.67
PRDM1-202ENST00000369091 TRPV6Q9H1D0 765 aa19.23■□□□□ 0.67
PRDM1-202ENST00000369091 ZNF358Q9NW07 568 aa19.23■□□□□ 0.67
PRDM1-202ENST00000369091 GIT1Q9Y2X7 761 aa19.23■□□□□ 0.67
PRDM1-202ENST00000369091 WDR64B1ANS9 1081 aa19.23■□□□□ 0.67
PRDM1-202ENST00000369091 CNOT3O75175 753 aaKnown RBP19.23■□□□□ 0.67
PRDM1-202ENST00000369091 LRCH4O75427 683 aa19.23■□□□□ 0.67
PRDM1-202ENST00000369091 BCAS2O75934 225 aaPredicted RBP19.23■□□□□ 0.67
PRDM1-202ENST00000369091 LDHAP00338 332 aaKnown RBP19.23■□□□□ 0.67
PRDM1-202ENST00000369091 ALDOAP04075 364 aaKnown RBP19.23■□□□□ 0.67
PRDM1-202ENST00000369091 RAB15P59190 212 aa19.23■□□□□ 0.67
PRDM1-202ENST00000369091 KCNC4Q03721 635 aa19.23■□□□□ 0.67
PRDM1-202ENST00000369091 SPP2Q13103 211 aa19.23■□□□□ 0.67
PRDM1-202ENST00000369091 PPM1JQ5JR12 505 aa19.23■□□□□ 0.67
PRDM1-202ENST00000369091 C15orf39Q6ZRI6 1047 aa19.23■□□□□ 0.67
PRDM1-202ENST00000369091 ZNF786Q8N393 782 aa19.23■□□□□ 0.67
PRDM1-202ENST00000369091 CROTQ9UKG9 612 aa19.23■□□□□ 0.67
PRDM1-202ENST00000369091 BAIAP3O94812 1187 aa19.22■□□□□ 0.67
PRDM1-202ENST00000369091 APRTP07741 180 aa19.22■□□□□ 0.67
PRDM1-202ENST00000369091 GNAO1P09471 354 aa19.22■□□□□ 0.67
PRDM1-202ENST00000369091 ME2P23368 584 aa19.22■□□□□ 0.67
PRDM1-202ENST00000369091 ETFBP38117 255 aa19.22■□□□□ 0.67
PRDM1-202ENST00000369091 NPTX2P47972 431 aa19.22■□□□□ 0.67
PRDM1-202ENST00000369091 MCCD1P59942 119 aaPredicted RBP19.22■□□□□ 0.67
PRDM1-202ENST00000369091 RPS3AP61247 264 aaKnown RBP19.22■□□□□ 0.67
PRDM1-202ENST00000369091 NFIAQ12857 509 aa19.22■□□□□ 0.67
PRDM1-202ENST00000369091 ZNF394Q53GI3 561 aa19.22■□□□□ 0.67
PRDM1-202ENST00000369091 EPGNQ6UW88 154 aa19.22■□□□□ 0.67
PRDM1-202ENST00000369091 MAP4K3Q8IVH8 894 aa19.22■□□□□ 0.67
PRDM1-202ENST00000369091 KCTD6Q8NC69 237 aa19.22■□□□□ 0.67
PRDM1-202ENST00000369091 DCPSQ96C86 337 aaKnown RBP19.22■□□□□ 0.67
PRDM1-202ENST00000369091 NACA2Q9H009 215 aa19.22■□□□□ 0.67
PRDM1-202ENST00000369091 TPK1Q9H3S4 243 aa19.22■□□□□ 0.67
PRDM1-202ENST00000369091 CXorf21Q9HAI6 301 aa19.22■□□□□ 0.67
PRDM1-202ENST00000369091 FAM159BA6NKW6 160 aa19.22■□□□□ 0.67
PRDM1-202ENST00000369091 APOC4-APOC2K7ER74 178 aa19.22■□□□□ 0.67
PRDM1-202ENST00000369091 CHADO15335 359 aa19.22■□□□□ 0.67
PRDM1-202ENST00000369091 APOC2P02655 101 aa19.22■□□□□ 0.67
PRDM1-202ENST00000369091 RALBP11234 206 aa19.22■□□□□ 0.67
PRDM1-202ENST00000369091 TCF7P36402 384 aaPredicted RBP19.22■□□□□ 0.67
PRDM1-202ENST00000369091 GRM5P41594 1212 aa19.22■□□□□ 0.67
PRDM1-202ENST00000369091 NME3Q13232 169 aa19.22■□□□□ 0.67
PRDM1-202ENST00000369091 ITGADQ13349 1161 aa19.22■□□□□ 0.67
PRDM1-202ENST00000369091 UGCGQ16739 394 aa19.22■□□□□ 0.67
PRDM1-202ENST00000369091 LINC00116Q8NCU8 138 aa19.22■□□□□ 0.67
PRDM1-202ENST00000369091 BSNDQ8WZ55 320 aa19.22■□□□□ 0.67
PRDM1-202ENST00000369091 TMA16Q96EY4 203 aaKnown RBP19.22■□□□□ 0.67
PRDM1-202ENST00000369091 FBXL18Q96ME1 805 aa19.22■□□□□ 0.67
PRDM1-202ENST00000369091 WDR41Q9HAD4 459 aa19.22■□□□□ 0.67
PRDM1-202ENST00000369091 CNOT11Q9UKZ1 510 aaKnown RBP19.22■□□□□ 0.67
PRDM1-202ENST00000369091 SLC8A2Q9UPR5 921 aa19.22■□□□□ 0.67
PRDM1-202ENST00000369091 GOLGA8TH3BQL2 631 aa19.21■□□□□ 0.67
PRDM1-202ENST00000369091 H7C0C1 242 aa19.21■□□□□ 0.67
PRDM1-202ENST00000369091 TRDMT1O14717 391 aaKnown RBP19.21■□□□□ 0.67
PRDM1-202ENST00000369091 ACOT8O14734 319 aa19.21■□□□□ 0.67
PRDM1-202ENST00000369091 SEC24DO94855 1032 aaPredicted RBP19.21■□□□□ 0.67
PRDM1-202ENST00000369091 GDF11O95390 407 aa19.21■□□□□ 0.67
PRDM1-202ENST00000369091 ATP5OP48047 213 aa19.21■□□□□ 0.67
PRDM1-202ENST00000369091 SCNN1DP51172 638 aa19.21■□□□□ 0.67
PRDM1-202ENST00000369091 PMS2P3Q13401 168 aa19.21■□□□□ 0.67
PRDM1-202ENST00000369091 SEPT6Q14141 434 aa19.21■□□□□ 0.67
PRDM1-202ENST00000369091 GPD1LQ8N335 351 aa19.21■□□□□ 0.67
PRDM1-202ENST00000369091 EMC1Q8N766 993 aa19.21■□□□□ 0.67
PRDM1-202ENST00000369091 HM13Q8TCT9 377 aa19.21■□□□□ 0.67
PRDM1-202ENST00000369091 ST6GALNAC4Q9H4F1 302 aa19.21■□□□□ 0.67
PRDM1-202ENST00000369091 RBAKQ9NYW8 714 aaPredicted RBP19.21■□□□□ 0.67
PRDM1-202ENST00000369091 TMEM216Q9P0N5 145 aa19.21■□□□□ 0.67
PRDM1-202ENST00000369091 SNX13Q9Y5W8 968 aa19.21■□□□□ 0.67
PRDM1-202ENST00000369091 KRBA1A5PL33 1030 aa19.21■□□□□ 0.67
PRDM1-202ENST00000369091 HTRA2O43464 458 aaPredicted RBP19.21■□□□□ 0.67
PRDM1-202ENST00000369091 CALB1P05937 261 aa19.21■□□□□ 0.67
PRDM1-202ENST00000369091 RGS21Q2M5E4 152 aa19.21■□□□□ 0.67
PRDM1-202ENST00000369091 DEPDC1Q5TB30 811 aa19.21■□□□□ 0.67
PRDM1-202ENST00000369091 ANKRD26P1Q6NSI1 321 aa19.21■□□□□ 0.67
PRDM1-202ENST00000369091 KCNT2Q6UVM3 1135 aa19.21■□□□□ 0.67
PRDM1-202ENST00000369091 DLG3Q92796 817 aa19.21■□□□□ 0.67
PRDM1-202ENST00000369091 FERMT1Q9BQL6 677 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms