RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 CREB3L4Q8TEY5 395 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 PTP4A1Q93096 173 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 OSBP2Q969R2 916 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 LRRC45Q96CN5 670 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 MRPL38Q96DV4 380 aaKnown RBP3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 TCTN2Q96GX1 697 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 PPP1R13BQ96KQ4 1090 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 FGD4Q96M96 766 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 SPXQ9BT56 116 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 COLEC11Q9BWP8 271 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 CAPS2Q9BXY5 557 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 B3GNT5Q9BYG0 378 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 TASP1Q9H6P5 420 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 CNTD2Q9H8S5 307 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 PDE11AQ9HCR9 933 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 TM9SF3Q9HD45 589 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 CD209Q9NNX6 404 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 TAS2R3Q9NYW6 316 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 COX16Q9P0S2 106 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 RBPJLQ9UBG7 517 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 PTBP2Q9UKA9 531 aaKnown RBP3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 ZKSCAN5Q9Y2L8 839 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 LOC285556D6RIA3 1793 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 MROH5Q6ZUA9 1318 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 hCG_1807616A0A1W2PRN6 198 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 ZNF891A8MT65 544 aaPredicted RBP3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 B8ZZF3 427 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 GTPBP1O00178 669 aaKnown RBP3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 CETN3O15182 167 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 RNF113AO15541 343 aaKnown RBP3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 SYNCRIPO60506 623 aaKnown RBP3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 UBXN7O94888 489 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 LETM1O95202 739 aaPredicted RBP3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 EPN2O95208 641 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 WNT11O96014 354 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 IFNAR1P17181 557 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 PTPN2P17706 415 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 SFPQP23246 707 aaKnown RBP eCLIP3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 EEF1DP29692 281 aaKnown RBP3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 NNMTP40261 264 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 HSPA7P48741 367 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 CDK7P50613 346 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 AGFG1P52594 562 aaKnown RBP3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 PCBP3P57721 371 aaKnown RBP3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 DEFB103AP81534 67 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 ZNF543Q08ER8 600 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 CHAF1BQ13112 559 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 CUL4BQ13620 913 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 PTK2BQ14289 1009 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 MXD4Q14582 209 aaPredicted RBP3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 CNN3Q15417 329 aaKnown RBP3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 SMAD1Q15797 465 aaKnown RBP3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 STK11Q15831 433 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 KCNA10Q16322 511 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 PFKFB4Q16877 469 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 TMEM266Q2M3C6 531 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 ANO6Q4KMQ2 910 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 FLYWCH1Q4VC44 716 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 FIBCD1Q8N539 461 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 CLRN3Q8NCR9 226 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 GMCL1P1Q8NEA9 526 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 PTPRN2Q92932 1015 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 TUBGCP3Q96CW5 907 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 MVB12AQ96EY5 273 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 CCDC120Q96HB5 630 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 TMEM169Q96HH4 297 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 TGS1Q96RS0 853 aaKnown RBP3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 TXN2Q99757 166 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 PDCD2LQ9BRP1 358 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 SORBS1Q9BX66 1292 aaKnown RBP3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 TRIM7Q9C029 511 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 TRPV6Q9H1D0 765 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 CARS2Q9HA77 564 aaKnown RBP3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 DCP1AQ9NPI6 582 aaPredicted RBP3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 CD93Q9NPY3 652 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 DDX18Q9NVP1 670 aaKnown RBP3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 LRFN1Q9P244 771 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 KIF17Q9P2E2 1029 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 CDH22Q9UJ99 828 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 MINPP1Q9UNW1 487 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 CLCA2Q9UQC9 943 aa3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 USP15Q9Y4E8 981 aaPredicted RBP3.71□□□□□ -1.82
ECHDC1-205ENST00000368295 LRRC72A6NJI9 287 aa3.7□□□□□ -1.82
ECHDC1-205ENST00000368295 K7EPI3 171 aa3.7□□□□□ -1.82
ECHDC1-205ENST00000368295 SYT5O00445 386 aa3.7□□□□□ -1.82
ECHDC1-205ENST00000368295 MEIS1O00470 390 aa3.7□□□□□ -1.82
ECHDC1-205ENST00000368295 NOP56O00567 594 aaKnown RBP3.7□□□□□ -1.82
ECHDC1-205ENST00000368295 UBE2CO00762 179 aa3.7□□□□□ -1.82
ECHDC1-205ENST00000368295 SPOPO43791 374 aa3.7□□□□□ -1.82
ECHDC1-205ENST00000368295 ZNF254O75437 659 aa3.7□□□□□ -1.82
ECHDC1-205ENST00000368295 PIAS2O75928 621 aa3.7□□□□□ -1.82
ECHDC1-205ENST00000368295 PGM3O95394 542 aa3.7□□□□□ -1.82
ECHDC1-205ENST00000368295 ADCY5O95622 1261 aa3.7□□□□□ -1.82
ECHDC1-205ENST00000368295 ESR1P03372 595 aa3.7□□□□□ -1.82
ECHDC1-205ENST00000368295 SYPP08247 313 aa3.7□□□□□ -1.82
ECHDC1-205ENST00000368295 CD8BP10966 210 aa3.7□□□□□ -1.82
ECHDC1-205ENST00000368295 ACADMP11310 421 aa3.7□□□□□ -1.82
ECHDC1-205ENST00000368295 FUT4P22083 530 aa3.7□□□□□ -1.82
ECHDC1-205ENST00000368295 KELP23276 732 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms