RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 TUBP50607 506 aa15.18■□□□□ 0.02
CXCL12-201ENST00000343575 TBX4P57082 545 aa15.18■□□□□ 0.02
CXCL12-201ENST00000343575 SNX1Q13596 522 aa15.18■□□□□ 0.02
CXCL12-201ENST00000343575 DPYSQ14117 519 aa15.18■□□□□ 0.02
CXCL12-201ENST00000343575 TAF12Q16514 161 aa15.18■□□□□ 0.02
CXCL12-201ENST00000343575 CCNG2Q16589 344 aa15.18■□□□□ 0.02
CXCL12-201ENST00000343575 EFHC2Q5JST6 749 aa15.18■□□□□ 0.02
CXCL12-201ENST00000343575 HECTD3Q5T447 861 aa15.18■□□□□ 0.02
CXCL12-201ENST00000343575 NPNTQ6UXI9 565 aa15.18■□□□□ 0.02
CXCL12-201ENST00000343575 LRIG3Q6UXM1 1119 aa15.18■□□□□ 0.02
CXCL12-201ENST00000343575 RFX6Q8HWS3 928 aa15.18■□□□□ 0.02
CXCL12-201ENST00000343575 OSBPL2Q9H1P3 480 aa15.18■□□□□ 0.02
CXCL12-201ENST00000343575 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.18■□□□□ 0.02
CXCL12-201ENST00000343575 OR12D3Q9UGF7 316 aa15.18■□□□□ 0.02
CXCL12-201ENST00000343575 PCYOX1Q9UHG3 505 aa15.18■□□□□ 0.02
CXCL12-201ENST00000343575 RASAL2Q9UJF2 1139 aa15.18■□□□□ 0.02
CXCL12-201ENST00000343575 GOLGA6L10A0A0M3HER8 536 aa15.17■□□□□ 0.02
CXCL12-201ENST00000343575 SLC12A8A0AV02 714 aa15.17■□□□□ 0.02
CXCL12-201ENST00000343575 CREB3O43889 395 aa15.17■□□□□ 0.02
CXCL12-201ENST00000343575 CHRNA3P32297 505 aa15.17■□□□□ 0.02
CXCL12-201ENST00000343575 LSP1P33241 339 aa15.17■□□□□ 0.02
CXCL12-201ENST00000343575 ATP5C1P36542 298 aaKnown RBP15.17■□□□□ 0.02
CXCL12-201ENST00000343575 KCNQ1P51787 676 aa15.17■□□□□ 0.02
CXCL12-201ENST00000343575 ZXDBP98169 803 aa15.17■□□□□ 0.02
CXCL12-201ENST00000343575 SLC10A2Q12908 348 aaPredicted RBP15.17■□□□□ 0.02
CXCL12-201ENST00000343575 KCNC3Q14003 757 aa15.17■□□□□ 0.02
CXCL12-201ENST00000343575 ARL13BQ3SXY8 428 aa15.17■□□□□ 0.02
CXCL12-201ENST00000343575 PPM1LQ5SGD2 360 aa15.17■□□□□ 0.02
CXCL12-201ENST00000343575 MANEALQ5VSG8 457 aa15.17■□□□□ 0.02
CXCL12-201ENST00000343575 CCDC137Q6PK04 289 aaKnown RBP15.17■□□□□ 0.02
CXCL12-201ENST00000343575 VN1R2Q8NFZ6 395 aa15.17■□□□□ 0.02
CXCL12-201ENST00000343575 SLC35B2Q8TB61 432 aa15.17■□□□□ 0.02
CXCL12-201ENST00000343575 ACTL9Q8TC94 416 aa15.17■□□□□ 0.02
CXCL12-201ENST00000343575 MAIP1Q8WWC4 291 aa15.17■□□□□ 0.02
CXCL12-201ENST00000343575 P3H4Q92791 437 aa15.17■□□□□ 0.02
CXCL12-201ENST00000343575 RNF34Q969K3 372 aa15.17■□□□□ 0.02
CXCL12-201ENST00000343575 ZFRQ96KR1 1074 aaKnown RBP15.17■□□□□ 0.02
CXCL12-201ENST00000343575 ZIM3Q96PE6 472 aa15.17■□□□□ 0.02
CXCL12-201ENST00000343575 HAPLN3Q96S86 360 aa15.17■□□□□ 0.02
CXCL12-201ENST00000343575 CYP2S1Q96SQ9 504 aa15.17■□□□□ 0.02
CXCL12-201ENST00000343575 CXorf56Q9H5V9 222 aa15.17■□□□□ 0.02
CXCL12-201ENST00000343575 SLITRK6Q9H5Y7 841 aa15.17■□□□□ 0.02
CXCL12-201ENST00000343575 ARHGEF4Q9NR80 690 aa15.17■□□□□ 0.02
CXCL12-201ENST00000343575 RCOR3Q9P2K3 495 aaPredicted RBP15.17■□□□□ 0.02
CXCL12-201ENST00000343575 UXTQ9UBK9 157 aaPredicted RBP15.17■□□□□ 0.02
CXCL12-201ENST00000343575 DNMT3LQ9UJW3 386 aa15.17■□□□□ 0.02
CXCL12-201ENST00000343575 DNPEPQ9ULA0 475 aa15.17■□□□□ 0.02
CXCL12-201ENST00000343575 GOLGA6L7A0A1B0GV03 622 aa15.16■□□□□ 0.02
CXCL12-201ENST00000343575 APOC4-APOC2K7ER74 178 aa15.16■□□□□ 0.02
CXCL12-201ENST00000343575 TTI1O43156 1089 aa15.16■□□□□ 0.02
CXCL12-201ENST00000343575 LIASO43766 372 aa15.16■□□□□ 0.02
CXCL12-201ENST00000343575 LRIG2O94898 1065 aa15.16■□□□□ 0.02
CXCL12-201ENST00000343575 OLFM2O95897 454 aa15.16■□□□□ 0.02
CXCL12-201ENST00000343575 APOC2P02655 101 aa15.16■□□□□ 0.02
CXCL12-201ENST00000343575 GABRR2P28476 465 aa15.16■□□□□ 0.02
CXCL12-201ENST00000343575 PPP3CCP48454 512 aa15.16■□□□□ 0.02
CXCL12-201ENST00000343575 OTUD4Q01804 1114 aaKnown RBP15.16■□□□□ 0.02
CXCL12-201ENST00000343575 TRADDQ15628 312 aa15.16■□□□□ 0.02
CXCL12-201ENST00000343575 OASLQ15646 514 aaKnown RBP15.16■□□□□ 0.02
CXCL12-201ENST00000343575 PIK3R6Q5UE93 754 aa15.16■□□□□ 0.02
CXCL12-201ENST00000343575 NCBP2-AS2Q69YL0 99 aa15.16■□□□□ 0.02
CXCL12-201ENST00000343575 TXNDC8Q6A555 127 aa15.16■□□□□ 0.02
CXCL12-201ENST00000343575 RFX8Q6ZV50 586 aa15.16■□□□□ 0.02
CXCL12-201ENST00000343575 TSEN2Q8NCE0 465 aaKnown RBP15.16■□□□□ 0.02
CXCL12-201ENST00000343575 WBP2Q969T9 261 aa15.16■□□□□ 0.02
CXCL12-201ENST00000343575 ARL8AQ96BM9 186 aa15.16■□□□□ 0.02
CXCL12-201ENST00000343575 LMAN2LQ9H0V9 348 aa15.16■□□□□ 0.02
CXCL12-201ENST00000343575 DNMT3BQ9UBC3 853 aaKnown RBP15.16■□□□□ 0.02
CXCL12-201ENST00000343575 GOLGA6L10A6NI86 522 aa15.16■□□□□ 0.02
CXCL12-201ENST00000343575 DCLK1O15075 740 aa15.16■□□□□ 0.02
CXCL12-201ENST00000343575 MOSPD3O75425 235 aa15.16■□□□□ 0.02
CXCL12-201ENST00000343575 HMBSP08397 361 aa15.16■□□□□ 0.02
CXCL12-201ENST00000343575 GJA1P17302 382 aa15.16■□□□□ 0.02
CXCL12-201ENST00000343575 NR1D1P20393 614 aa15.16■□□□□ 0.02
CXCL12-201ENST00000343575 HCAR3P49019 387 aa15.16■□□□□ 0.02
CXCL12-201ENST00000343575 EPHA5P54756 1037 aa15.16■□□□□ 0.02
CXCL12-201ENST00000343575 MLLT6P55198 1093 aaPredicted RBP15.16■□□□□ 0.02
CXCL12-201ENST00000343575 CYP4F8P98187 520 aa15.16■□□□□ 0.02
CXCL12-201ENST00000343575 RING1Q06587 406 aa15.16■□□□□ 0.02
CXCL12-201ENST00000343575 DUSP6Q16828 381 aa15.16■□□□□ 0.02
CXCL12-201ENST00000343575 DRICH1Q6PGQ1 229 aaPredicted RBP15.16■□□□□ 0.02
CXCL12-201ENST00000343575 RTL10Q7L3V2 364 aa15.16■□□□□ 0.02
CXCL12-201ENST00000343575 C14orf80Q86SX3 495 aa15.16■□□□□ 0.02
CXCL12-201ENST00000343575 ZNF683Q8IZ20 524 aa15.16■□□□□ 0.02
CXCL12-201ENST00000343575 ZNF707Q96C28 371 aaPredicted RBP15.16■□□□□ 0.02
CXCL12-201ENST00000343575 TIFAQ96CG3 184 aa15.16■□□□□ 0.02
CXCL12-201ENST00000343575 ATP6V1G3Q96LB4 118 aa15.16■□□□□ 0.02
CXCL12-201ENST00000343575 CORO1BQ9BR76 489 aa15.16■□□□□ 0.02
CXCL12-201ENST00000343575 KLF16Q9BXK1 252 aaPredicted RBP15.16■□□□□ 0.02
CXCL12-201ENST00000343575 SIK2Q9H0K1 926 aa15.16■□□□□ 0.02
CXCL12-201ENST00000343575 C10orf88Q9H8K7 445 aa15.16■□□□□ 0.02
CXCL12-201ENST00000343575 GKN1Q9NS71 199 aa15.16■□□□□ 0.02
CXCL12-201ENST00000343575 NEU2Q9Y3R4 380 aa15.16■□□□□ 0.02
CXCL12-201ENST00000343575 HS3ST4Q9Y661 456 aa15.16■□□□□ 0.02
CXCL12-201ENST00000343575 REV3LO60673 3130 aa15.15■□□□□ 0.02
CXCL12-201ENST00000343575 EEF2KO00418 725 aaKnown RBP15.15■□□□□ 0.02
CXCL12-201ENST00000343575 FAM107AO95990 144 aa15.15■□□□□ 0.02
CXCL12-201ENST00000343575 MOCS2O96007 188 aaPredicted RBP15.15■□□□□ 0.02
CXCL12-201ENST00000343575 KLKB1P03952 638 aa15.15■□□□□ 0.02
CXCL12-201ENST00000343575 HOXA9P31269 272 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms