RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 HAS3O00219 553 aa25.77■■□□□ 1.72
ROM1-201ENST00000278833 HUS1O60921 280 aa25.77■■□□□ 1.72
ROM1-201ENST00000278833 LUC7L3O95232 432 aaKnown RBP25.77■■□□□ 1.72
ROM1-201ENST00000278833 PDGFRBP09619 1106 aa25.77■■□□□ 1.72
ROM1-201ENST00000278833 NPR3P17342 541 aa25.77■■□□□ 1.72
ROM1-201ENST00000278833 GRIA1P42261 906 aa25.77■■□□□ 1.72
ROM1-201ENST00000278833 CLNS1AP54105 237 aaKnown RBP25.77■■□□□ 1.72
ROM1-201ENST00000278833 SCAPQ12770 1279 aa25.77■■□□□ 1.72
ROM1-201ENST00000278833 HSF5Q4G112 596 aaPredicted RBP25.77■■□□□ 1.72
ROM1-201ENST00000278833 CES4AQ5XG92 561 aa25.77■■□□□ 1.72
ROM1-201ENST00000278833 PLEKHH3Q7Z736 793 aa25.77■■□□□ 1.72
ROM1-201ENST00000278833 OSTM1Q86WC4 334 aa25.77■■□□□ 1.72
ROM1-201ENST00000278833 ARHGAP24Q8N264 748 aa25.77■■□□□ 1.72
ROM1-201ENST00000278833 ARNTL2Q8WYA1 636 aa25.77■■□□□ 1.72
ROM1-201ENST00000278833 THAP1Q9NVV9 213 aa25.77■■□□□ 1.72
ROM1-201ENST00000278833 DOCK3Q8IZD9 2030 aa25.77■■□□□ 1.72
ROM1-201ENST00000278833 C9IYK1 514 aa25.77■■□□□ 1.72
ROM1-201ENST00000278833 RNF103O00237 685 aa25.77■■□□□ 1.72
ROM1-201ENST00000278833 GYG2O15488 501 aa25.77■■□□□ 1.72
ROM1-201ENST00000278833 ESRRAP11474 423 aaPredicted RBP25.77■■□□□ 1.72
ROM1-201ENST00000278833 RAP1GDS1P52306 607 aa25.77■■□□□ 1.72
ROM1-201ENST00000278833 GJA9P57773 515 aa25.77■■□□□ 1.72
ROM1-201ENST00000278833 TMEM62Q0P6H9 643 aa25.77■■□□□ 1.72
ROM1-201ENST00000278833 PACS1Q6VY07 963 aa25.77■■□□□ 1.72
ROM1-201ENST00000278833 MECRQ9BV79 373 aa25.77■■□□□ 1.72
ROM1-201ENST00000278833 NMUR2Q9GZQ4 415 aa25.77■■□□□ 1.72
ROM1-201ENST00000278833 DCLK1O15075 740 aa25.76■■□□□ 1.71
ROM1-201ENST00000278833 MAGEC1O60732 1142 aa25.76■■□□□ 1.71
ROM1-201ENST00000278833 ADIGQ0VDE8 80 aa25.76■■□□□ 1.71
ROM1-201ENST00000278833 FAM131BQ86XD5 332 aa25.76■■□□□ 1.71
ROM1-201ENST00000278833 P2RY11Q96G91 374 aa25.76■■□□□ 1.71
ROM1-201ENST00000278833 PRR11Q96HE9 360 aaPredicted RBP25.76■■□□□ 1.71
ROM1-201ENST00000278833 MAGEB5Q9BZ81 275 aa25.76■■□□□ 1.71
ROM1-201ENST00000278833 SLC13A1Q9BZW2 595 aa25.76■■□□□ 1.71
ROM1-201ENST00000278833 TAS2R1Q9NYW7 299 aa25.76■■□□□ 1.71
ROM1-201ENST00000278833 PIN4Q9Y237 131 aaKnown RBP25.76■■□□□ 1.71
ROM1-201ENST00000278833 MFHAS1Q9Y4C4 1052 aa25.76■■□□□ 1.71
ROM1-201ENST00000278833 WDR27A2RRH5 827 aa25.75■■□□□ 1.71
ROM1-201ENST00000278833 GABRDO14764 452 aa25.75■■□□□ 1.71
ROM1-201ENST00000278833 FBXO21O94952 628 aa25.75■■□□□ 1.71
ROM1-201ENST00000278833 GSRP00390 522 aa25.75■■□□□ 1.71
ROM1-201ENST00000278833 RPSAP08865 295 aaKnown RBP25.75■■□□□ 1.71
ROM1-201ENST00000278833 AKAP5P24588 427 aa25.75■■□□□ 1.71
ROM1-201ENST00000278833 HCAR3P49019 387 aa25.75■■□□□ 1.71
ROM1-201ENST00000278833 LILRA4P59901 499 aa25.75■■□□□ 1.71
ROM1-201ENST00000278833 SOX4Q06945 474 aaPredicted RBP25.75■■□□□ 1.71
ROM1-201ENST00000278833 MROH9Q5TGP6 573 aa25.75■■□□□ 1.71
ROM1-201ENST00000278833 PYROXD2Q8N2H3 581 aa25.75■■□□□ 1.71
ROM1-201ENST00000278833 LRRN4Q8WUT4 740 aa25.75■■□□□ 1.71
ROM1-201ENST00000278833 WNT8BQ93098 351 aa25.75■■□□□ 1.71
ROM1-201ENST00000278833 ADAM28Q9UKQ2 775 aa25.75■■□□□ 1.71
ROM1-201ENST00000278833 MAGEA12P43365 314 aa25.74■■□□□ 1.71
ROM1-201ENST00000278833 ZNF135P52742 658 aaPredicted RBP25.74■■□□□ 1.71
ROM1-201ENST00000278833 STX3Q13277 289 aa25.74■■□□□ 1.71
ROM1-201ENST00000278833 MFSD10Q14728 455 aa25.74■■□□□ 1.71
ROM1-201ENST00000278833 INTS6LQ5JSJ4 861 aaKnown RBP25.74■■□□□ 1.71
ROM1-201ENST00000278833 SPANXN3Q5MJ09 141 aa25.74■■□□□ 1.71
ROM1-201ENST00000278833 ARID3BQ8IVW6 561 aaPredicted RBP25.74■■□□□ 1.71
ROM1-201ENST00000278833 TRIM56Q9BRZ2 755 aaKnown RBP25.74■■□□□ 1.71
ROM1-201ENST00000278833 BRD8Q9H0E9 1235 aa25.74■■□□□ 1.71
ROM1-201ENST00000278833 FAM96AQ9H5X1 160 aa25.74■■□□□ 1.71
ROM1-201ENST00000278833 DCDC2Q9UHG0 476 aa25.74■■□□□ 1.71
ROM1-201ENST00000278833 FCGRTP55899 365 aa25.74■■□□□ 1.71
ROM1-201ENST00000278833 SEMA3BQ13214 749 aa25.74■■□□□ 1.71
ROM1-201ENST00000278833 ZNF618Q5T7W0 954 aa25.74■■□□□ 1.71
ROM1-201ENST00000278833 MBLAC2Q68D91 279 aa25.74■■□□□ 1.71
ROM1-201ENST00000278833 RINLQ6ZS11 566 aa25.74■■□□□ 1.71
ROM1-201ENST00000278833 NPLOC4Q8TAT6 608 aa25.74■■□□□ 1.71
ROM1-201ENST00000278833 PGAP3Q96FM1 320 aaPredicted RBP25.74■■□□□ 1.71
ROM1-201ENST00000278833 LGMNQ99538 433 aa25.74■■□□□ 1.71
ROM1-201ENST00000278833 XPNPEP3Q9NQH7 507 aa25.74■■□□□ 1.71
ROM1-201ENST00000278833 EMCNQ9ULC0 261 aa25.74■■□□□ 1.71
ROM1-201ENST00000278833 GINS2Q9Y248 185 aa25.74■■□□□ 1.71
ROM1-201ENST00000278833 GTF3C5Q9Y5Q8 519 aaPredicted RBP25.74■■□□□ 1.71
ROM1-201ENST00000278833 ALDOAP04075 364 aaKnown RBP25.73■■□□□ 1.71
ROM1-201ENST00000278833 SERPINA6P08185 405 aa25.73■■□□□ 1.71
ROM1-201ENST00000278833 CRYBB1P53674 252 aaPredicted RBP25.73■■□□□ 1.71
ROM1-201ENST00000278833 PAQR9Q6ZVX9 377 aa25.73■■□□□ 1.71
ROM1-201ENST00000278833 PDZD4Q76G19 769 aaPredicted RBP25.73■■□□□ 1.71
ROM1-201ENST00000278833 TTC7BQ86TV6 843 aa25.73■■□□□ 1.71
ROM1-201ENST00000278833 TMPRSS6Q8IU80 811 aa25.73■■□□□ 1.71
ROM1-201ENST00000278833 PDCD7Q8N8D1 485 aaKnown RBP25.73■■□□□ 1.71
ROM1-201ENST00000278833 TTC8Q8TAM2 541 aa25.73■■□□□ 1.71
ROM1-201ENST00000278833 TMEM40Q8WWA1 233 aa25.73■■□□□ 1.71
ROM1-201ENST00000278833 ATP2A3Q93084 1043 aa25.73■■□□□ 1.71
ROM1-201ENST00000278833 SDAD1Q9NVU7 687 aaKnown RBP eCLIP25.73■■□□□ 1.71
ROM1-201ENST00000278833 STOML1Q9UBI4 398 aa25.73■■□□□ 1.71
ROM1-201ENST00000278833 CYB561D2O14569 222 aa25.72■■□□□ 1.71
ROM1-201ENST00000278833 TNPO2O14787 897 aaKnown RBP25.72■■□□□ 1.71
ROM1-201ENST00000278833 NCAM2O15394 837 aa25.72■■□□□ 1.71
ROM1-201ENST00000278833 PLIN3O60664 434 aa25.72■■□□□ 1.71
ROM1-201ENST00000278833 IBSPP21815 317 aaPredicted RBP25.72■■□□□ 1.71
ROM1-201ENST00000278833 HOXC8P31273 242 aa25.72■■□□□ 1.71
ROM1-201ENST00000278833 RFX8Q6ZV50 586 aa25.72■■□□□ 1.71
ROM1-201ENST00000278833 ALYREFQ86V81 257 aaKnown RBP25.72■■□□□ 1.71
ROM1-201ENST00000278833 NME8Q8N427 588 aa25.72■■□□□ 1.71
ROM1-201ENST00000278833 TEX9Q8N6V9 391 aa25.72■■□□□ 1.71
ROM1-201ENST00000278833 SMG8Q8ND04 991 aaKnown RBP25.72■■□□□ 1.71
ROM1-201ENST00000278833 APOL6Q9BWW8 343 aa25.72■■□□□ 1.71
ROM1-201ENST00000278833 RRN3Q9NYV6 651 aa25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms