RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 SETD7Q8WTS6 366 aaKnown RBP11.34□□□□□ -0.59
MSH6-201ENST00000234420 INTS10Q9NVR2 710 aaKnown RBP11.34□□□□□ -0.59
MSH6-201ENST00000234420 NCDNQ9UBB6 729 aa11.34□□□□□ -0.59
MSH6-201ENST00000234420 GSAPA4D1B5 854 aa11.34□□□□□ -0.59
MSH6-201ENST00000234420 TRIM64BA6NI03 449 aa11.34□□□□□ -0.59
MSH6-201ENST00000234420 C3orf70A6NLC5 250 aaPredicted RBP11.34□□□□□ -0.59
MSH6-201ENST00000234420 OR6A2O95222 327 aa11.34□□□□□ -0.59
MSH6-201ENST00000234420 FCGR1AP12314 374 aa11.34□□□□□ -0.59
MSH6-201ENST00000234420 FBXO42Q6P3S6 717 aa11.34□□□□□ -0.59
MSH6-201ENST00000234420 HDDC3Q8N4P3 179 aa11.34□□□□□ -0.59
MSH6-201ENST00000234420 DPF2Q92785 391 aa11.34□□□□□ -0.59
MSH6-201ENST00000234420 USP7Q93009 1102 aa11.34□□□□□ -0.59
MSH6-201ENST00000234420 PMEPA1Q969W9 287 aa11.34□□□□□ -0.59
MSH6-201ENST00000234420 MTMR8Q96EF0 704 aa11.34□□□□□ -0.59
MSH6-201ENST00000234420 GLIS2Q9BZE0 524 aaPredicted RBP11.34□□□□□ -0.59
MSH6-201ENST00000234420 IFI30P13284 250 aa11.34□□□□□ -0.59
MSH6-201ENST00000234420 SLC9A4Q6AI14 798 aa11.34□□□□□ -0.59
MSH6-201ENST00000234420 PYDC1Q8WXC3 89 aa11.34□□□□□ -0.59
MSH6-201ENST00000234420 ARHGEF26Q96DR7 871 aa11.34□□□□□ -0.59
MSH6-201ENST00000234420 MRPL48Q96GC5 212 aaKnown RBP11.34□□□□□ -0.59
MSH6-201ENST00000234420 SERPINB12Q96P63 405 aa11.34□□□□□ -0.59
MSH6-201ENST00000234420 EHD1Q9H4M9 534 aa11.34□□□□□ -0.59
MSH6-201ENST00000234420 SPG21Q9NZD8 308 aa11.34□□□□□ -0.59
MSH6-201ENST00000234420 EMSYQ7Z589 1322 aa11.34□□□□□ -0.59
MSH6-201ENST00000234420 PDHXO00330 501 aa11.34□□□□□ -0.59
MSH6-201ENST00000234420 PTPN1P18031 435 aaKnown RBP11.34□□□□□ -0.59
MSH6-201ENST00000234420 ALDH5A1P51649 535 aaPredicted RBP11.34□□□□□ -0.59
MSH6-201ENST00000234420 TCEAL5Q5H9L2 206 aa11.34□□□□□ -0.59
MSH6-201ENST00000234420 TMED8Q6PL24 325 aaPredicted RBP11.34□□□□□ -0.59
MSH6-201ENST00000234420 IL17REQ8NFR9 667 aa11.34□□□□□ -0.59
MSH6-201ENST00000234420 CLHC1Q8NHS4 586 aa11.34□□□□□ -0.59
MSH6-201ENST00000234420 FIG4Q92562 907 aa11.34□□□□□ -0.59
MSH6-201ENST00000234420 MTG1Q9BT17 334 aaPredicted RBP11.34□□□□□ -0.59
MSH6-201ENST00000234420 PIH1D3Q9NQM4 214 aaKnown RBP11.34□□□□□ -0.59
MSH6-201ENST00000234420 GMEB2Q9UKD1 530 aa11.34□□□□□ -0.59
MSH6-201ENST00000234420 CHN2P52757 468 aa11.34□□□□□ -0.59
MSH6-201ENST00000234420 ATF7IP2Q5U623 682 aa11.34□□□□□ -0.59
MSH6-201ENST00000234420 HERC6Q8IVU3 1022 aa11.34□□□□□ -0.59
MSH6-201ENST00000234420 ANKRD13AQ8IZ07 590 aa11.34□□□□□ -0.59
MSH6-201ENST00000234420 STK32AQ8WU08 396 aa11.34□□□□□ -0.59
MSH6-201ENST00000234420 DNAJB3Q8WWF6 145 aa11.34□□□□□ -0.59
MSH6-201ENST00000234420 S100A13Q99584 98 aa11.34□□□□□ -0.59
MSH6-201ENST00000234420 BDH2Q9BUT1 245 aa11.34□□□□□ -0.59
MSH6-201ENST00000234420 FUT8Q9BYC5 575 aa11.34□□□□□ -0.59
MSH6-201ENST00000234420 INTS2Q9H0H0 1204 aaKnown RBP11.34□□□□□ -0.59
MSH6-201ENST00000234420 TBC1D24Q9ULP9 559 aa11.34□□□□□ -0.59
MSH6-201ENST00000234420 DNAJC16Q9Y2G8 782 aa11.34□□□□□ -0.59
MSH6-201ENST00000234420 TCF7P36402 384 aaPredicted RBP11.33□□□□□ -0.6
MSH6-201ENST00000234420 STXBP1P61764 594 aaKnown RBP11.33□□□□□ -0.6
MSH6-201ENST00000234420 ORC2Q13416 577 aaPredicted RBP11.33□□□□□ -0.6
MSH6-201ENST00000234420 DENND5AQ6IQ26 1287 aa11.33□□□□□ -0.6
MSH6-201ENST00000234420 BHLHB9Q6PI77 547 aa11.33□□□□□ -0.6
MSH6-201ENST00000234420 RIPOR1Q6ZS17 1223 aa11.33□□□□□ -0.6
MSH6-201ENST00000234420 PLEKHH3Q7Z736 793 aa11.33□□□□□ -0.6
MSH6-201ENST00000234420 NDNQ99608 321 aa11.33□□□□□ -0.6
MSH6-201ENST00000234420 SLC38A7Q9NVC3 462 aa11.33□□□□□ -0.6
MSH6-201ENST00000234420 GHRP10912 638 aa11.33□□□□□ -0.6
MSH6-201ENST00000234420 PAX3P23760 479 aa11.33□□□□□ -0.6
MSH6-201ENST00000234420 RGS4P49798 205 aa11.33□□□□□ -0.6
MSH6-201ENST00000234420 UGP2Q16851 508 aa11.33□□□□□ -0.6
MSH6-201ENST00000234420 PTPN20Q4JDL3 420 aa11.33□□□□□ -0.6
MSH6-201ENST00000234420 FAXCQ5TGI0 409 aa11.33□□□□□ -0.6
MSH6-201ENST00000234420 GPR107Q5VW38 600 aa11.33□□□□□ -0.6
MSH6-201ENST00000234420 CYP2R1Q6VVX0 501 aa11.33□□□□□ -0.6
MSH6-201ENST00000234420 DCP1BQ8IZD4 617 aaKnown RBP11.33□□□□□ -0.6
MSH6-201ENST00000234420 PROM2Q8N271 834 aa11.33□□□□□ -0.6
MSH6-201ENST00000234420 ALLCQ8N6M5 410 aa11.33□□□□□ -0.6
MSH6-201ENST00000234420 FAR1Q8WVX9 515 aa11.33□□□□□ -0.6
MSH6-201ENST00000234420 ERP44Q9BS26 406 aa11.33□□□□□ -0.6
MSH6-201ENST00000234420 HTATIP2Q9BUP3 242 aa11.33□□□□□ -0.6
MSH6-201ENST00000234420 BHLHE41Q9C0J9 482 aaPredicted RBP11.33□□□□□ -0.6
MSH6-201ENST00000234420 PXMP2Q9NR77 195 aa11.33□□□□□ -0.6
MSH6-201ENST00000234420 ZNF221Q9UK13 617 aa11.33□□□□□ -0.6
MSH6-201ENST00000234420 USP18Q9UMW8 372 aa11.33□□□□□ -0.6
MSH6-201ENST00000234420 PFASO15067 1338 aa11.33□□□□□ -0.6
MSH6-201ENST00000234420 NPHP4O75161 1426 aaPredicted RBP11.33□□□□□ -0.6
MSH6-201ENST00000234420 SUPT7LO94864 414 aa11.33□□□□□ -0.6
MSH6-201ENST00000234420 TGFBR2P37173 567 aa11.33□□□□□ -0.6
MSH6-201ENST00000234420 KNOP1Q1ED39 458 aaKnown RBP11.33□□□□□ -0.6
MSH6-201ENST00000234420 CYP4Z2PQ8N1L4 340 aa11.33□□□□□ -0.6
MSH6-201ENST00000234420 C2orf73Q8N5S3 287 aaPredicted RBP11.33□□□□□ -0.6
MSH6-201ENST00000234420 TSPAN14Q8NG11 270 aa11.33□□□□□ -0.6
MSH6-201ENST00000234420 OSBPL11Q9BXB4 747 aa11.33□□□□□ -0.6
MSH6-201ENST00000234420 MIEF1Q9NQG6 463 aa11.33□□□□□ -0.6
MSH6-201ENST00000234420 SLC35C2Q9NQQ7 365 aa11.33□□□□□ -0.6
MSH6-201ENST00000234420 COMMD8Q9NX08 183 aa11.33□□□□□ -0.6
MSH6-201ENST00000234420 RABL2AQ9UBK7 228 aaPredicted RBP11.33□□□□□ -0.6
MSH6-201ENST00000234420 WDR19Q8NEZ3 1342 aa11.33□□□□□ -0.6
MSH6-201ENST00000234420 SYN1P17600 705 aa11.33□□□□□ -0.6
MSH6-201ENST00000234420 AKT2P31751 481 aa11.33□□□□□ -0.6
MSH6-201ENST00000234420 BEX3Q00994 111 aa11.33□□□□□ -0.6
MSH6-201ENST00000234420 ATP6AP1LQ52LC2 224 aa11.33□□□□□ -0.6
MSH6-201ENST00000234420 TRIM65Q6PJ69 517 aa11.33□□□□□ -0.6
MSH6-201ENST00000234420 MSANTD1Q6ZTZ1 278 aa11.33□□□□□ -0.6
MSH6-201ENST00000234420 POLNQ7Z5Q5 900 aa11.33□□□□□ -0.6
MSH6-201ENST00000234420 DHRSXQ8N5I4 330 aa11.33□□□□□ -0.6
MSH6-201ENST00000234420 PRDM4Q9UKN5 801 aa11.33□□□□□ -0.6
MSH6-201ENST00000234420 NEDD4P46934 1319 aa11.33□□□□□ -0.6
MSH6-201ENST00000234420 CYP26A1O43174 497 aa11.33□□□□□ -0.6
MSH6-201ENST00000234420 CASP12Q6UXS9 341 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms