RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 USP45Q70EL2 814 aa11.34□□□□□ -0.59
KNOP1-201ENST00000219837 RNF44Q7L0R7 432 aa11.34□□□□□ -0.59
KNOP1-201ENST00000219837 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.34□□□□□ -0.59
KNOP1-201ENST00000219837 FNDC5Q8NAU1 212 aa11.34□□□□□ -0.59
KNOP1-201ENST00000219837 C3orf20Q8ND61 904 aa11.34□□□□□ -0.59
KNOP1-201ENST00000219837 ATP8B4Q8TF62 1192 aa11.34□□□□□ -0.59
KNOP1-201ENST00000219837 TRAPPC12Q8WVT3 735 aa11.34□□□□□ -0.59
KNOP1-201ENST00000219837 GLIS2Q9BZE0 524 aaPredicted RBP11.34□□□□□ -0.59
KNOP1-201ENST00000219837 TMX2Q9Y320 296 aa11.34□□□□□ -0.59
KNOP1-201ENST00000219837 DIP2BQ9P265 1576 aa11.34□□□□□ -0.59
KNOP1-201ENST00000219837 CPA3P15088 417 aa11.34□□□□□ -0.59
KNOP1-201ENST00000219837 PEX5P50542 639 aa11.34□□□□□ -0.59
KNOP1-201ENST00000219837 PPP4CP60510 307 aa11.34□□□□□ -0.59
KNOP1-201ENST00000219837 IL2P60568 153 aa11.34□□□□□ -0.59
KNOP1-201ENST00000219837 NFIAQ12857 509 aa11.34□□□□□ -0.59
KNOP1-201ENST00000219837 ARMCX4Q5H9R4 360 aa11.34□□□□□ -0.59
KNOP1-201ENST00000219837 MFSD7Q6UXD7 560 aa11.34□□□□□ -0.59
KNOP1-201ENST00000219837 ARHGEF19Q8IW93 802 aa11.34□□□□□ -0.59
KNOP1-201ENST00000219837 MCOLN3Q8TDD5 553 aa11.34□□□□□ -0.59
KNOP1-201ENST00000219837 GPN3Q9UHW5 284 aaPredicted RBP11.34□□□□□ -0.59
KNOP1-201ENST00000219837 KLF15Q9UIH9 416 aa11.34□□□□□ -0.59
KNOP1-201ENST00000219837 TMEM114B3SHH9 223 aa11.34□□□□□ -0.59
KNOP1-201ENST00000219837 FDPSP14324 419 aaKnown RBP11.34□□□□□ -0.59
KNOP1-201ENST00000219837 BDNFP23560 247 aa11.34□□□□□ -0.59
KNOP1-201ENST00000219837 AXLP30530 894 aa11.34□□□□□ -0.59
KNOP1-201ENST00000219837 SARSP49591 514 aaKnown RBP11.34□□□□□ -0.59
KNOP1-201ENST00000219837 SLC27A1Q6PCB7 646 aa11.34□□□□□ -0.59
KNOP1-201ENST00000219837 KIAA1324Q6UXG2 1013 aaKnown RBP11.34□□□□□ -0.59
KNOP1-201ENST00000219837 CASP12Q6UXS9 341 aa11.34□□□□□ -0.59
KNOP1-201ENST00000219837 AGMOQ6ZNB7 445 aa11.34□□□□□ -0.59
KNOP1-201ENST00000219837 C4orf19Q8IY42 314 aa11.34□□□□□ -0.59
KNOP1-201ENST00000219837 SLC40A1Q9NP59 571 aa11.34□□□□□ -0.59
KNOP1-201ENST00000219837 POLG2Q9UHN1 485 aa11.34□□□□□ -0.59
KNOP1-201ENST00000219837 ZNHIT2Q9UHR6 403 aa11.34□□□□□ -0.59
KNOP1-201ENST00000219837 ANKRD6Q9Y2G4 727 aa11.34□□□□□ -0.59
KNOP1-201ENST00000219837 PNPLA6Q8IY17 1366 aa11.33□□□□□ -0.6
KNOP1-201ENST00000219837 A0A087X1B8 175 aa11.33□□□□□ -0.6
KNOP1-201ENST00000219837 PEX1O43933 1283 aa11.33□□□□□ -0.6
KNOP1-201ENST00000219837 SP100P23497 879 aaPredicted RBP11.33□□□□□ -0.6
KNOP1-201ENST00000219837 SPIDRQ14159 915 aa11.33□□□□□ -0.6
KNOP1-201ENST00000219837 ITIH4Q14624 930 aa11.33□□□□□ -0.6
KNOP1-201ENST00000219837 AGKQ53H12 422 aa11.33□□□□□ -0.6
KNOP1-201ENST00000219837 FGD3Q5JSP0 725 aa11.33□□□□□ -0.6
KNOP1-201ENST00000219837 NEK10Q6ZWH5 1172 aa11.33□□□□□ -0.6
KNOP1-201ENST00000219837 ELOA2Q8IYF1 753 aaPredicted RBP11.33□□□□□ -0.6
KNOP1-201ENST00000219837 SYTL5Q8TDW5 730 aaPredicted RBP11.33□□□□□ -0.6
KNOP1-201ENST00000219837 CPNE1Q99829 537 aa11.33□□□□□ -0.6
KNOP1-201ENST00000219837 MID1IP1Q9NPA3 183 aa11.33□□□□□ -0.6
KNOP1-201ENST00000219837 MAGEB16A2A368 324 aa11.33□□□□□ -0.6
KNOP1-201ENST00000219837 PABPC1P11940 636 aaKnown RBP11.33□□□□□ -0.6
KNOP1-201ENST00000219837 ATP12AP54707 1039 aa11.33□□□□□ -0.6
KNOP1-201ENST00000219837 TMEM132CQ8N3T6 1108 aa11.33□□□□□ -0.6
KNOP1-201ENST00000219837 TMC2Q8TDI7 906 aa11.33□□□□□ -0.6
KNOP1-201ENST00000219837 SERPINB11Q96P15 392 aa11.33□□□□□ -0.6
KNOP1-201ENST00000219837 PNMA5Q96PV4 448 aa11.33□□□□□ -0.6
KNOP1-201ENST00000219837 KLHL4Q9C0H6 718 aa11.33□□□□□ -0.6
KNOP1-201ENST00000219837 GANQ9H2C0 597 aa11.33□□□□□ -0.6
KNOP1-201ENST00000219837 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.33□□□□□ -0.6
KNOP1-201ENST00000219837 IL1RAPL1Q9NZN1 696 aa11.33□□□□□ -0.6
KNOP1-201ENST00000219837 ADCYAP1R1P41586 468 aa11.33□□□□□ -0.6
KNOP1-201ENST00000219837 ERVK-24P63145 666 aa11.33□□□□□ -0.6
KNOP1-201ENST00000219837 IRX1P78414 480 aaPredicted RBP11.33□□□□□ -0.6
KNOP1-201ENST00000219837 FBXL19Q6PCT2 694 aa11.33□□□□□ -0.6
KNOP1-201ENST00000219837 C11orf88Q6PI97 169 aa11.33□□□□□ -0.6
KNOP1-201ENST00000219837 FOXR1Q6PIV2 292 aa11.33□□□□□ -0.6
KNOP1-201ENST00000219837 MILR1Q7Z6M3 343 aa11.33□□□□□ -0.6
KNOP1-201ENST00000219837 ZNF655Q8N720 491 aaPredicted RBP11.33□□□□□ -0.6
KNOP1-201ENST00000219837 REPS2Q8NFH8 660 aa11.33□□□□□ -0.6
KNOP1-201ENST00000219837 SPPL2AQ8TCT8 520 aa11.33□□□□□ -0.6
KNOP1-201ENST00000219837 RSPH1Q8WYR4 309 aa11.33□□□□□ -0.6
KNOP1-201ENST00000219837 ERGIC2Q96RQ1 377 aa11.33□□□□□ -0.6
KNOP1-201ENST00000219837 F8VZ95 297 aa11.33□□□□□ -0.6
KNOP1-201ENST00000219837 NCAM2O15394 837 aa11.33□□□□□ -0.6
KNOP1-201ENST00000219837 ACSL4O60488 711 aa11.33□□□□□ -0.6
KNOP1-201ENST00000219837 KRT33AO76009 404 aa11.33□□□□□ -0.6
KNOP1-201ENST00000219837 ZNF7P17097 686 aaPredicted RBP11.33□□□□□ -0.6
KNOP1-201ENST00000219837 CD151P48509 253 aa11.33□□□□□ -0.6
KNOP1-201ENST00000219837 GSSP48637 474 aa11.33□□□□□ -0.6
KNOP1-201ENST00000219837 KLHL24Q6TFL4 600 aa11.33□□□□□ -0.6
KNOP1-201ENST00000219837 FBXO39Q8N4B4 442 aa11.33□□□□□ -0.6
KNOP1-201ENST00000219837 SCAIQ8N9R8 606 aa11.33□□□□□ -0.6
KNOP1-201ENST00000219837 MOSPD2Q8NHP6 518 aa11.33□□□□□ -0.6
KNOP1-201ENST00000219837 PPP1R13LQ8WUF5 828 aa11.33□□□□□ -0.6
KNOP1-201ENST00000219837 CATSPERZQ9NTU4 200 aa11.33□□□□□ -0.6
KNOP1-201ENST00000219837 TRIM43BA6NCK2 446 aa11.33□□□□□ -0.6
KNOP1-201ENST00000219837 PIK3CDO00329 1044 aa11.33□□□□□ -0.6
KNOP1-201ENST00000219837 TM9SF1O15321 606 aa11.33□□□□□ -0.6
KNOP1-201ENST00000219837 CNOT3O75175 753 aaKnown RBP11.33□□□□□ -0.6
KNOP1-201ENST00000219837 AMD1P17707 334 aa11.33□□□□□ -0.6
KNOP1-201ENST00000219837 AMPD1P23109 780 aa11.33□□□□□ -0.6
KNOP1-201ENST00000219837 GRK2P25098 689 aa11.33□□□□□ -0.6
KNOP1-201ENST00000219837 INSCQ1MX18 579 aa11.33□□□□□ -0.6
KNOP1-201ENST00000219837 CCDC153Q494R4 210 aa11.33□□□□□ -0.6
KNOP1-201ENST00000219837 MOXD1Q6UVY6 613 aa11.33□□□□□ -0.6
KNOP1-201ENST00000219837 LRRC74BQ6ZQY2 392 aa11.33□□□□□ -0.6
KNOP1-201ENST00000219837 ZNF720Q7Z2F6 126 aa11.33□□□□□ -0.6
KNOP1-201ENST00000219837 CACTIN-AS1Q8N1I8 211 aa11.33□□□□□ -0.6
KNOP1-201ENST00000219837 TMEM199Q8N511 208 aa11.33□□□□□ -0.6
KNOP1-201ENST00000219837 A1CFQ9NQ94 594 aaKnown RBP11.33□□□□□ -0.6
KNOP1-201ENST00000219837 GAKO14976 1311 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms