RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 NUCKS1Q9H1E3 243 aaKnown RBP23.18■■□□□ 1.3
GTF2F1-204ENST00000594965 NLRC4Q9NPP4 1024 aa23.18■■□□□ 1.3
GTF2F1-204ENST00000594965 ELOVL2Q9NXB9 296 aa23.18■■□□□ 1.3
GTF2F1-204ENST00000594965 USP18Q9UMW8 372 aa23.18■■□□□ 1.3
GTF2F1-204ENST00000594965 CEP83Q9Y592 693 aa23.18■■□□□ 1.3
GTF2F1-204ENST00000594965 WDR87Q6ZQQ6 2873 aa23.18■■□□□ 1.3
GTF2F1-204ENST00000594965 TBL1XO60907 577 aa23.17■■□□□ 1.3
GTF2F1-204ENST00000594965 HSF2BPO75031 334 aa23.17■■□□□ 1.3
GTF2F1-204ENST00000594965 GFPT2O94808 682 aa23.17■■□□□ 1.3
GTF2F1-204ENST00000594965 MMEP08473 750 aa23.17■■□□□ 1.3
GTF2F1-204ENST00000594965 CDK11BP21127 795 aaKnown RBP23.17■■□□□ 1.3
GTF2F1-204ENST00000594965 P2RY2P41231 377 aa23.17■■□□□ 1.3
GTF2F1-204ENST00000594965 IL12RB1P42701 662 aa23.17■■□□□ 1.3
GTF2F1-204ENST00000594965 MAP7D1Q3KQU3 841 aa23.17■■□□□ 1.3
GTF2F1-204ENST00000594965 MPP7Q5T2T1 576 aa23.17■■□□□ 1.3
GTF2F1-204ENST00000594965 SDE2Q6IQ49 451 aa23.17■■□□□ 1.3
GTF2F1-204ENST00000594965 SLC26A9Q7LBE3 791 aa23.17■■□□□ 1.3
GTF2F1-204ENST00000594965 DHX40Q8IX18 779 aaKnown RBP23.17■■□□□ 1.3
GTF2F1-204ENST00000594965 DDX51Q8N8A6 666 aaKnown RBP eCLIP23.17■■□□□ 1.3
GTF2F1-204ENST00000594965 ZNF397Q8NF99 534 aaPredicted RBP23.17■■□□□ 1.3
GTF2F1-204ENST00000594965 SORCS1Q8WY21 1168 aa23.17■■□□□ 1.3
GTF2F1-204ENST00000594965 BPIFA3Q9BQP9 254 aa23.17■■□□□ 1.3
GTF2F1-204ENST00000594965 FUCA2Q9BTY2 467 aa23.17■■□□□ 1.3
GTF2F1-204ENST00000594965 ARRDC1-AS1Q9H2J1 176 aa23.17■■□□□ 1.3
GTF2F1-204ENST00000594965 SEMA4GQ9NTN9 838 aa23.17■■□□□ 1.3
GTF2F1-204ENST00000594965 BCCIPQ9P287 314 aaKnown RBP eCLIP23.17■■□□□ 1.3
GTF2F1-204ENST00000594965 NOCTQ9UK39 431 aaKnown RBP23.17■■□□□ 1.3
GTF2F1-204ENST00000594965 STON1Q9Y6Q2 735 aa23.17■■□□□ 1.3
GTF2F1-204ENST00000594965 FAM170AA1A519 330 aa23.16■■□□□ 1.3
GTF2F1-204ENST00000594965 MOCS2O96007 188 aaPredicted RBP23.16■■□□□ 1.3
GTF2F1-204ENST00000594965 SOX5P35711 763 aa23.16■■□□□ 1.3
GTF2F1-204ENST00000594965 GABRB2P47870 512 aa23.16■■□□□ 1.3
GTF2F1-204ENST00000594965 EIF4HQ15056 248 aaKnown RBP23.16■■□□□ 1.3
GTF2F1-204ENST00000594965 MS4A13Q5J8X5 152 aa23.16■■□□□ 1.3
GTF2F1-204ENST00000594965 PMS2CLQ68D20 193 aa23.16■■□□□ 1.3
GTF2F1-204ENST00000594965 ANKRD20A12PQ8NF67 263 aa23.16■■□□□ 1.3
GTF2F1-204ENST00000594965 SLC20A1Q8WUM9 679 aa23.16■■□□□ 1.3
GTF2F1-204ENST00000594965 RMDN1Q96DB5 314 aa23.16■■□□□ 1.3
GTF2F1-204ENST00000594965 LMLNQ96KR4 655 aa23.16■■□□□ 1.3
GTF2F1-204ENST00000594965 ERGIC2Q96RQ1 377 aa23.16■■□□□ 1.3
GTF2F1-204ENST00000594965 PDCL3Q9H2J4 239 aa23.16■■□□□ 1.3
GTF2F1-204ENST00000594965 MBD1Q9UIS9 605 aaPredicted RBP23.16■■□□□ 1.3
GTF2F1-204ENST00000594965 KCNU1A8MYU2 1149 aa23.15■■□□□ 1.3
GTF2F1-204ENST00000594965 DAB1O75553 588 aa23.15■■□□□ 1.3
GTF2F1-204ENST00000594965 CHRNB2P17787 502 aa23.15■■□□□ 1.3
GTF2F1-204ENST00000594965 SNX16P57768 344 aa23.15■■□□□ 1.3
GTF2F1-204ENST00000594965 RPS24P62847 133 aaKnown RBP23.15■■□□□ 1.3
GTF2F1-204ENST00000594965 CDK17Q00537 523 aa23.15■■□□□ 1.3
GTF2F1-204ENST00000594965 UBXN1Q04323 297 aa23.15■■□□□ 1.3
GTF2F1-204ENST00000594965 ZNF234Q14588 700 aa23.15■■□□□ 1.3
GTF2F1-204ENST00000594965 CSRP2Q16527 193 aa23.15■■□□□ 1.3
GTF2F1-204ENST00000594965 OTUD1Q5VV17 481 aaPredicted RBP23.15■■□□□ 1.3
GTF2F1-204ENST00000594965 ADIPOR2Q86V24 386 aa23.15■■□□□ 1.3
GTF2F1-204ENST00000594965 PGBD3Q8N328 593 aa23.15■■□□□ 1.3
GTF2F1-204ENST00000594965 HJURPQ8NCD3 748 aaPredicted RBP23.15■■□□□ 1.3
GTF2F1-204ENST00000594965 UCMAQ8WVF2 138 aa23.15■■□□□ 1.3
GTF2F1-204ENST00000594965 DDX50Q9BQ39 737 aaKnown RBP23.15■■□□□ 1.3
GTF2F1-204ENST00000594965 ADAM33Q9BZ11 813 aa23.15■■□□□ 1.3
GTF2F1-204ENST00000594965 SYNCQ9H7C4 482 aa23.15■■□□□ 1.3
GTF2F1-204ENST00000594965 FAM204AQ9H8W3 233 aa23.15■■□□□ 1.3
GTF2F1-204ENST00000594965 ABCB8Q9NUT2 735 aa23.15■■□□□ 1.3
GTF2F1-204ENST00000594965 CALCOCO1Q9P1Z2 691 aa23.15■■□□□ 1.3
GTF2F1-204ENST00000594965 DAAM1Q9Y4D1 1078 aa23.15■■□□□ 1.3
GTF2F1-204ENST00000594965 NPC1O15118 1278 aa23.14■■□□□ 1.29
GTF2F1-204ENST00000594965 RHOBTB1O94844 696 aa23.14■■□□□ 1.29
GTF2F1-204ENST00000594965 APOEP02649 317 aa23.14■■□□□ 1.29
GTF2F1-204ENST00000594965 NDUFV2P19404 249 aa23.14■■□□□ 1.29
GTF2F1-204ENST00000594965 GBP1P32455 592 aa23.14■■□□□ 1.29
GTF2F1-204ENST00000594965 CD70P32970 193 aa23.14■■□□□ 1.29
GTF2F1-204ENST00000594965 NOMO3P69849 1222 aa23.14■■□□□ 1.29
GTF2F1-204ENST00000594965 CCDC6Q16204 474 aa23.14■■□□□ 1.29
GTF2F1-204ENST00000594965 C2CD6Q53TS8 623 aa23.14■■□□□ 1.29
GTF2F1-204ENST00000594965 PLA2G2CQ5R387 149 aa23.14■■□□□ 1.29
GTF2F1-204ENST00000594965 CHST9Q7L1S5 443 aa23.14■■□□□ 1.29
GTF2F1-204ENST00000594965 XYLT1Q86Y38 959 aa23.14■■□□□ 1.29
GTF2F1-204ENST00000594965 ZDHHC17Q8IUH5 632 aa23.14■■□□□ 1.29
GTF2F1-204ENST00000594965 WFIKKN2Q8TEU8 576 aa23.14■■□□□ 1.29
GTF2F1-204ENST00000594965 C18orf8Q96DM3 657 aa23.14■■□□□ 1.29
GTF2F1-204ENST00000594965 CIPCQ9C0C6 399 aa23.14■■□□□ 1.29
GTF2F1-204ENST00000594965 NAT10Q9H0A0 1025 aaKnown RBP23.14■■□□□ 1.29
GTF2F1-204ENST00000594965 SLC6A17Q9H1V8 727 aa23.14■■□□□ 1.29
GTF2F1-204ENST00000594965 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.14■■□□□ 1.29
GTF2F1-204ENST00000594965 STIM2Q9P246 746 aa23.14■■□□□ 1.29
GTF2F1-204ENST00000594965 GGA2Q9UJY4 613 aa23.14■■□□□ 1.29
GTF2F1-204ENST00000594965 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.14■■□□□ 1.29
GTF2F1-204ENST00000594965 SYNJ2BP-COX16A0A087WUM0 186 aa23.13■■□□□ 1.29
GTF2F1-204ENST00000594965 TIMM44O43615 452 aa23.13■■□□□ 1.29
GTF2F1-204ENST00000594965 LSM8O95777 96 aaKnown RBP23.13■■□□□ 1.29
GTF2F1-204ENST00000594965 PABPC1P11940 636 aaKnown RBP23.13■■□□□ 1.29
GTF2F1-204ENST00000594965 TACR2P21452 398 aa23.13■■□□□ 1.29
GTF2F1-204ENST00000594965 PRKCHP24723 683 aa23.13■■□□□ 1.29
GTF2F1-204ENST00000594965 NOS2P35228 1153 aa23.13■■□□□ 1.29
GTF2F1-204ENST00000594965 ID4P47928 161 aa23.13■■□□□ 1.29
GTF2F1-204ENST00000594965 FMO1Q01740 532 aa23.13■■□□□ 1.29
GTF2F1-204ENST00000594965 CDR2Q01850 454 aa23.13■■□□□ 1.29
GTF2F1-204ENST00000594965 ELF2Q15723 593 aa23.13■■□□□ 1.29
GTF2F1-204ENST00000594965 RAP1GAP2Q684P5 730 aa23.13■■□□□ 1.29
GTF2F1-204ENST00000594965 PRR23CQ6ZRP0 262 aa23.13■■□□□ 1.29
GTF2F1-204ENST00000594965 C11orf74Q86VG3 221 aa23.13■■□□□ 1.29
GTF2F1-204ENST00000594965 ERICH1Q86X53 443 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms