RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 SNX10Q9Y5X0 201 aa11.79□□□□□ -0.52
SMAD4-205ENST00000588745 GBF1Q92538 1859 aa11.79□□□□□ -0.52
SMAD4-205ENST00000588745 ZNF840PA6NDX5 716 aa11.79□□□□□ -0.52
SMAD4-205ENST00000588745 C5orf67F2Z3F1 127 aa11.79□□□□□ -0.52
SMAD4-205ENST00000588745 DNALI1O14645 258 aaPredicted RBP11.79□□□□□ -0.52
SMAD4-205ENST00000588745 MAP3K6O95382 1288 aa11.79□□□□□ -0.52
SMAD4-205ENST00000588745 CXCL14O95715 111 aa11.79□□□□□ -0.52
SMAD4-205ENST00000588745 MOCS2O96007 188 aaPredicted RBP11.79□□□□□ -0.52
SMAD4-205ENST00000588745 IFNB1P01574 187 aa11.79□□□□□ -0.52
SMAD4-205ENST00000588745 APOEP02649 317 aa11.79□□□□□ -0.52
SMAD4-205ENST00000588745 ERCC2P18074 760 aa11.79□□□□□ -0.52
SMAD4-205ENST00000588745 ITIH2P19823 946 aa11.79□□□□□ -0.52
SMAD4-205ENST00000588745 HOXC13P31276 330 aa11.79□□□□□ -0.52
SMAD4-205ENST00000588745 GGCXP38435 758 aa11.79□□□□□ -0.52
SMAD4-205ENST00000588745 ADCY8P40145 1251 aa11.79□□□□□ -0.52
SMAD4-205ENST00000588745 EPHB3P54753 998 aa11.79□□□□□ -0.52
SMAD4-205ENST00000588745 NRG1Q02297 640 aaPredicted RBP11.79□□□□□ -0.52
SMAD4-205ENST00000588745 CAV1Q03135 178 aa11.79□□□□□ -0.52
SMAD4-205ENST00000588745 TAF12Q16514 161 aa11.79□□□□□ -0.52
SMAD4-205ENST00000588745 P3H1Q32P28 736 aa11.79□□□□□ -0.52
SMAD4-205ENST00000588745 MANEALQ5VSG8 457 aa11.79□□□□□ -0.52
SMAD4-205ENST00000588745 IZUMO3Q5VZ72 239 aa11.79□□□□□ -0.52
SMAD4-205ENST00000588745 BZW1Q7L1Q6 419 aaKnown RBP11.79□□□□□ -0.52
SMAD4-205ENST00000588745 PRUNE1Q86TP1 453 aa11.79□□□□□ -0.52
SMAD4-205ENST00000588745 UNC45BQ8IWX7 931 aa11.79□□□□□ -0.52
SMAD4-205ENST00000588745 PIAS4Q8N2W9 510 aaPredicted RBP11.79□□□□□ -0.52
SMAD4-205ENST00000588745 POF1BQ8WVV4 589 aa11.79□□□□□ -0.52
SMAD4-205ENST00000588745 PSMG2Q969U7 264 aa11.79□□□□□ -0.52
SMAD4-205ENST00000588745 ZNF512Q96ME7 567 aaPredicted RBP11.79□□□□□ -0.52
SMAD4-205ENST00000588745 QKIQ96PU8 341 aaKnown RBP eCLIP11.79□□□□□ -0.522e-6■■■■□ 20.5
SMAD4-205ENST00000588745 C17orf80Q9BSJ5 609 aa11.79□□□□□ -0.52
SMAD4-205ENST00000588745 EMILIN2Q9BXX0 1053 aa11.79□□□□□ -0.52
SMAD4-205ENST00000588745 ALG13Q9NP73 1137 aaKnown RBP11.79□□□□□ -0.52
SMAD4-205ENST00000588745 TRPM5Q9NZQ8 1165 aa11.79□□□□□ -0.52
SMAD4-205ENST00000588745 UXTQ9UBK9 157 aaPredicted RBP11.79□□□□□ -0.52
SMAD4-205ENST00000588745 MTRF1LQ9UGC7 380 aaKnown RBP11.79□□□□□ -0.52
SMAD4-205ENST00000588745 NEU3Q9UQ49 428 aa11.79□□□□□ -0.52
SMAD4-205ENST00000588745 OBSL1O75147 1896 aa11.78□□□□□ -0.52
SMAD4-205ENST00000588745 SLC12A8A0AV02 714 aa11.78□□□□□ -0.52
SMAD4-205ENST00000588745 BCLAF3A2AJT9 711 aaKnown RBP11.78□□□□□ -0.52
SMAD4-205ENST00000588745 HACD1B0YJ81 288 aa11.78□□□□□ -0.52
SMAD4-205ENST00000588745 NDC80O14777 642 aa11.78□□□□□ -0.52
SMAD4-205ENST00000588745 TP73O15350 636 aa11.78□□□□□ -0.52
SMAD4-205ENST00000588745 ARHGEF15O94989 841 aa11.78□□□□□ -0.52
SMAD4-205ENST00000588745 TBX18O95935 607 aa11.78□□□□□ -0.52
SMAD4-205ENST00000588745 IGLV3-27P01718 113 aa11.78□□□□□ -0.52
SMAD4-205ENST00000588745 ZSCAN5DPP0CG00 497 aa11.78□□□□□ -0.52
SMAD4-205ENST00000588745 ETS1P14921 441 aa11.78□□□□□ -0.52
SMAD4-205ENST00000588745 EPHB2P29323 1055 aa11.78□□□□□ -0.52
SMAD4-205ENST00000588745 STIP1P31948 543 aaKnown RBP11.78□□□□□ -0.52
SMAD4-205ENST00000588745 HSPA9P38646 679 aaKnown RBP11.78□□□□□ -0.52
SMAD4-205ENST00000588745 MAGEA10P43363 369 aaPredicted RBP11.78□□□□□ -0.52
SMAD4-205ENST00000588745 PPP3CCP48454 512 aa11.78□□□□□ -0.52
SMAD4-205ENST00000588745 TUBP50607 506 aa11.78□□□□□ -0.52
SMAD4-205ENST00000588745 KPNA1P52294 538 aaPredicted RBP11.78□□□□□ -0.52
SMAD4-205ENST00000588745 ITGA8P53708 1063 aa11.78□□□□□ -0.52
SMAD4-205ENST00000588745 ERVFC1P60507 584 aa11.78□□□□□ -0.52
SMAD4-205ENST00000588745 RING1Q06587 406 aa11.78□□□□□ -0.52
SMAD4-205ENST00000588745 SLC10A2Q12908 348 aaPredicted RBP11.78□□□□□ -0.52
SMAD4-205ENST00000588745 GPS1Q13098 491 aa11.78□□□□□ -0.52
SMAD4-205ENST00000588745 SLC45A4Q5BKX6 768 aa11.78□□□□□ -0.52
SMAD4-205ENST00000588745 PLPP4Q5VZY2 271 aa11.78□□□□□ -0.52
SMAD4-205ENST00000588745 LILRA6Q6PI73 481 aa11.78□□□□□ -0.52
SMAD4-205ENST00000588745 KLHDC10Q6PID8 442 aa11.78□□□□□ -0.52
SMAD4-205ENST00000588745 RHBDF2Q6PJF5 856 aa11.78□□□□□ -0.52
SMAD4-205ENST00000588745 PDZD4Q76G19 769 aaPredicted RBP11.78□□□□□ -0.52
SMAD4-205ENST00000588745 ITIH5Q86UX2 942 aa11.78□□□□□ -0.52
SMAD4-205ENST00000588745 MIB1Q86YT6 1006 aa11.78□□□□□ -0.52
SMAD4-205ENST00000588745 ATP6V0D2Q8N8Y2 350 aa11.78□□□□□ -0.52
SMAD4-205ENST00000588745 FAM71DQ8N9W8 422 aa11.78□□□□□ -0.52
SMAD4-205ENST00000588745 SPPL3Q8TCT6 385 aa11.78□□□□□ -0.52
SMAD4-205ENST00000588745 LRRC45Q96CN5 670 aa11.78□□□□□ -0.52
SMAD4-205ENST00000588745 TBC1D31Q96DN5 1066 aa11.78□□□□□ -0.52
SMAD4-205ENST00000588745 RTP4Q96DX8 246 aa11.78□□□□□ -0.52
SMAD4-205ENST00000588745 VIPAS39Q9H9C1 493 aa11.78□□□□□ -0.52
SMAD4-205ENST00000588745 TLR9Q9NR96 1032 aa11.78□□□□□ -0.52
SMAD4-205ENST00000588745 HPCAL4Q9UM19 191 aa11.78□□□□□ -0.52
SMAD4-205ENST00000588745 HBS1LQ9Y450 684 aaKnown RBP11.78□□□□□ -0.52
SMAD4-205ENST00000588745 RAD54BQ9Y620 910 aa11.78□□□□□ -0.52
SMAD4-205ENST00000588745 HS3ST4Q9Y661 456 aa11.78□□□□□ -0.52
SMAD4-205ENST00000588745 C2orf71A6NGG8 1288 aa11.77□□□□□ -0.53
SMAD4-205ENST00000588745 HIDE1A8MVS5 230 aa11.77□□□□□ -0.53
SMAD4-205ENST00000588745 FGF10O15520 208 aaPredicted RBP11.77□□□□□ -0.53
SMAD4-205ENST00000588745 KCNN4O15554 427 aa11.77□□□□□ -0.53
SMAD4-205ENST00000588745 GLUD1P00367 558 aa11.77□□□□□ -0.53
SMAD4-205ENST00000588745 LRG1P02750 347 aa11.77□□□□□ -0.53
SMAD4-205ENST00000588745 RB1P06400 928 aa11.77□□□□□ -0.53
SMAD4-205ENST00000588745 MYOGP15173 224 aa11.77□□□□□ -0.53
SMAD4-205ENST00000588745 DNAJB1P25685 340 aa11.77□□□□□ -0.53
SMAD4-205ENST00000588745 RBL1P28749 1068 aa11.77□□□□□ -0.53
SMAD4-205ENST00000588745 SERPINB6P35237 376 aa11.77□□□□□ -0.53
SMAD4-205ENST00000588745 ATP5C1P36542 298 aaKnown RBP11.77□□□□□ -0.53
SMAD4-205ENST00000588745 MTA1Q13330 715 aa11.77□□□□□ -0.53
SMAD4-205ENST00000588745 PDK1Q15118 436 aa11.77□□□□□ -0.53
SMAD4-205ENST00000588745 HECTD3Q5T447 861 aa11.77□□□□□ -0.53
SMAD4-205ENST00000588745 PIK3R6Q5UE93 754 aa11.77□□□□□ -0.53
SMAD4-205ENST00000588745 NUGGCQ68CJ6 796 aa11.77□□□□□ -0.53
SMAD4-205ENST00000588745 HIBCHQ6NVY1 386 aaPredicted RBP11.77□□□□□ -0.53
SMAD4-205ENST00000588745 CCDC149Q6ZUS6 474 aa11.77□□□□□ -0.53
SMAD4-205ENST00000588745 TMC3Q7Z5M5 1100 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms