RNA–Protein interactions for RNA: ENST00000563911.5

HERPUD1-208, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 844 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-208ENST00000563911 PDPRQ8NCN5 879 aa6.67□□□□□ -1.34
HERPUD1-208ENST00000563911 VPS37AQ8NEZ2 397 aa6.67□□□□□ -1.34
HERPUD1-208ENST00000563911 PRSS33Q8NF86 280 aa6.67□□□□□ -1.34
HERPUD1-208ENST00000563911 NMD3Q96D46 503 aaKnown RBP6.67□□□□□ -1.34
HERPUD1-208ENST00000563911 MARS2Q96GW9 593 aaKnown RBP6.67□□□□□ -1.34
HERPUD1-208ENST00000563911 RBM15Q96T37 977 aaKnown RBP eCLIP6.67□□□□□ -1.342e-8■■■■□ 24.1
HERPUD1-208ENST00000563911 ARPC5LQ9BPX5 153 aa6.67□□□□□ -1.34
HERPUD1-208ENST00000563911 DPH1Q9BZG8 443 aa6.67□□□□□ -1.34
HERPUD1-208ENST00000563911 CRNKL1Q9BZJ0 848 aaKnown RBP6.67□□□□□ -1.34
HERPUD1-208ENST00000563911 UBE2ZQ9H832 354 aaPredicted RBP6.67□□□□□ -1.34
HERPUD1-208ENST00000563911 SMURF2Q9HAU4 748 aa6.67□□□□□ -1.34
HERPUD1-208ENST00000563911 IL1RAPL2Q9NP60 686 aa6.67□□□□□ -1.34
HERPUD1-208ENST00000563911 PLCB1Q9NQ66 1216 aa6.67□□□□□ -1.34
HERPUD1-208ENST00000563911 A1CFQ9NQ94 594 aaKnown RBP6.67□□□□□ -1.34
HERPUD1-208ENST00000563911 COL20A1Q9P218 1284 aa6.67□□□□□ -1.34
HERPUD1-208ENST00000563911 SWAP70Q9UH65 585 aa6.67□□□□□ -1.34
HERPUD1-208ENST00000563911 EIF2B4Q9UI10 523 aaKnown RBP6.67□□□□□ -1.34
HERPUD1-208ENST00000563911 MTUS1Q9ULD2 1270 aa6.67□□□□□ -1.34
HERPUD1-208ENST00000563911 EXOC6BQ9Y2D4 811 aa6.67□□□□□ -1.34
HERPUD1-208ENST00000563911 PLEKHM1Q9Y4G2 1056 aa6.67□□□□□ -1.34
HERPUD1-208ENST00000563911 GREB1LQ9C091 1923 aaPredicted RBP6.67□□□□□ -1.34
HERPUD1-208ENST00000563911 BAZ2AQ9UIF9 1905 aaKnown RBP6.67□□□□□ -1.34
HERPUD1-208ENST00000563911 ZBED9Q6R2W3 1325 aa6.67□□□□□ -1.34
HERPUD1-208ENST00000563911 BRWD1Q9NSI6 2320 aa6.67□□□□□ -1.34
HERPUD1-208ENST00000563911 LCTP09848 1927 aa6.66□□□□□ -1.34
HERPUD1-208ENST00000563911 H3BQ06 376 aaPredicted RBP6.66□□□□□ -1.34
HERPUD1-208ENST00000563911 DNAJB5O75953 348 aa6.66□□□□□ -1.34
HERPUD1-208ENST00000563911 KIF20AO95235 890 aa6.66□□□□□ -1.34
HERPUD1-208ENST00000563911 KCNA5P22460 613 aa6.66□□□□□ -1.34
HERPUD1-208ENST00000563911 GCSHP23434 173 aa6.66□□□□□ -1.34
HERPUD1-208ENST00000563911 APOBEC3AP31941 199 aaPredicted RBP6.66□□□□□ -1.34
HERPUD1-208ENST00000563911 MAN2A2P49641 1150 aa6.66□□□□□ -1.34
HERPUD1-208ENST00000563911 UCP3P55916 312 aa6.66□□□□□ -1.34
HERPUD1-208ENST00000563911 RPS16P62249 146 aaKnown RBP6.66□□□□□ -1.34
HERPUD1-208ENST00000563911 POU6F2P78424 691 aaPredicted RBP6.66□□□□□ -1.34
HERPUD1-208ENST00000563911 LONRF3Q496Y0 759 aa6.66□□□□□ -1.34
HERPUD1-208ENST00000563911 AACSQ86V21 672 aa6.66□□□□□ -1.34
HERPUD1-208ENST00000563911 DNERQ8NFT8 737 aa6.66□□□□□ -1.34
HERPUD1-208ENST00000563911 DEPTORQ8TB45 409 aa6.66□□□□□ -1.34
HERPUD1-208ENST00000563911 NEK9Q8TD19 979 aa6.66□□□□□ -1.34
HERPUD1-208ENST00000563911 MAML1Q92585 1016 aa6.66□□□□□ -1.34
HERPUD1-208ENST00000563911 MSLNLQ96KJ4 702 aa6.66□□□□□ -1.34
HERPUD1-208ENST00000563911 CCDC17Q96LX7 622 aa6.66□□□□□ -1.34
HERPUD1-208ENST00000563911 TLR10Q9BXR5 811 aa6.66□□□□□ -1.34
HERPUD1-208ENST00000563911 ZNF518BQ9C0D4 1074 aa6.66□□□□□ -1.34
HERPUD1-208ENST00000563911 DEF6Q9H4E7 631 aa6.66□□□□□ -1.34
HERPUD1-208ENST00000563911 CLIP2Q9UDT6 1046 aa6.66□□□□□ -1.34
HERPUD1-208ENST00000563911 CDYLQ9Y232 598 aa6.66□□□□□ -1.34
HERPUD1-208ENST00000563911 USP15Q9Y4E8 981 aaPredicted RBP6.66□□□□□ -1.34
HERPUD1-208ENST00000563911 DCHS1Q96JQ0 3298 aa6.65□□□□□ -1.34
HERPUD1-208ENST00000563911 LINC01553A4QN01 128 aa6.65□□□□□ -1.34
HERPUD1-208ENST00000563911 E9PLN8 166 aa6.65□□□□□ -1.34
HERPUD1-208ENST00000563911 ANP32CO43423 234 aa6.65□□□□□ -1.34
HERPUD1-208ENST00000563911 NCK2O43639 380 aa6.65□□□□□ -1.34
HERPUD1-208ENST00000563911 NBNO60934 754 aa6.65□□□□□ -1.34
HERPUD1-208ENST00000563911 VPS4BO75351 444 aa6.65□□□□□ -1.34
HERPUD1-208ENST00000563911 PRDM1O75626 825 aa6.65□□□□□ -1.34
HERPUD1-208ENST00000563911 CABYRO75952 493 aa6.65□□□□□ -1.34
HERPUD1-208ENST00000563911 PIM1P11309 404 aaPredicted RBP6.65□□□□□ -1.34
HERPUD1-208ENST00000563911 HOXA5P20719 270 aa6.65□□□□□ -1.34
HERPUD1-208ENST00000563911 ADD2P35612 726 aa6.65□□□□□ -1.34
HERPUD1-208ENST00000563911 SLC11A2P49281 568 aa6.65□□□□□ -1.34
HERPUD1-208ENST00000563911 SCNN1GP51170 649 aa6.65□□□□□ -1.34
HERPUD1-208ENST00000563911 RNASE9P60153 205 aaKnown RBP6.65□□□□□ -1.34
HERPUD1-208ENST00000563911 WDR5P61964 334 aaKnown RBP6.65□□□□□ -1.34
HERPUD1-208ENST00000563911 BTKQ06187 659 aa6.65□□□□□ -1.34
HERPUD1-208ENST00000563911 ICAM4Q14773 271 aa6.65□□□□□ -1.34
HERPUD1-208ENST00000563911 FAM102AQ5T9C2 384 aaPredicted RBP6.65□□□□□ -1.34
HERPUD1-208ENST00000563911 NAIF1Q69YI7 327 aaPredicted RBP6.65□□□□□ -1.34
HERPUD1-208ENST00000563911 CERS3Q8IU89 383 aa6.65□□□□□ -1.34
HERPUD1-208ENST00000563911 RHOT2Q8IXI1 618 aa6.65□□□□□ -1.34
HERPUD1-208ENST00000563911 EXOC8Q8IYI6 725 aa6.65□□□□□ -1.34
HERPUD1-208ENST00000563911 FAM46DQ8NEK8 389 aa6.65□□□□□ -1.34
HERPUD1-208ENST00000563911 PHOSPHO2Q8TCD6 241 aa6.65□□□□□ -1.34
HERPUD1-208ENST00000563911 FRAT1Q92837 279 aaPredicted RBP6.65□□□□□ -1.34
HERPUD1-208ENST00000563911 LOXL4Q96JB6 756 aa6.65□□□□□ -1.34
HERPUD1-208ENST00000563911 ADOQ96SZ5 270 aa6.65□□□□□ -1.34
HERPUD1-208ENST00000563911 PNKPQ96T60 521 aa6.65□□□□□ -1.34
HERPUD1-208ENST00000563911 VKORC1Q9BQB6 163 aa6.65□□□□□ -1.34
HERPUD1-208ENST00000563911 C17orf80Q9BSJ5 609 aa6.65□□□□□ -1.34
HERPUD1-208ENST00000563911 BDH2Q9BUT1 245 aa6.65□□□□□ -1.34
HERPUD1-208ENST00000563911 CNPPD1Q9BV87 410 aa6.65□□□□□ -1.34
HERPUD1-208ENST00000563911 MTIF3Q9H2K0 278 aaKnown RBP6.65□□□□□ -1.34
HERPUD1-208ENST00000563911 ATP8A2Q9NTI2 1148 aa6.65□□□□□ -1.34
HERPUD1-208ENST00000563911 NYAP2Q9P242 653 aa6.65□□□□□ -1.34
HERPUD1-208ENST00000563911 PADI4Q9UM07 663 aa6.65□□□□□ -1.34
HERPUD1-208ENST00000563911 ZNF318Q5VUA4 2279 aa6.64□□□□□ -1.35
HERPUD1-208ENST00000563911 ZBED4O75132 1171 aa6.64□□□□□ -1.35
HERPUD1-208ENST00000563911 TSHRP16473 764 aa6.64□□□□□ -1.35
HERPUD1-208ENST00000563911 COPB2P35606 906 aa6.64□□□□□ -1.35
HERPUD1-208ENST00000563911 PTTG1IPP53801 180 aa6.64□□□□□ -1.35
HERPUD1-208ENST00000563911 PIGFQ07326 219 aa6.64□□□□□ -1.35
HERPUD1-208ENST00000563911 ZNF844Q08AG5 666 aa6.64□□□□□ -1.35
HERPUD1-208ENST00000563911 TCF15Q12870 199 aa6.64□□□□□ -1.35
HERPUD1-208ENST00000563911 DUSP28Q4G0W2 176 aa6.64□□□□□ -1.35
HERPUD1-208ENST00000563911 KLHDC7AQ5VTJ3 777 aa6.64□□□□□ -1.35
HERPUD1-208ENST00000563911 AGAP9Q5VTM2 703 aa6.64□□□□□ -1.35
HERPUD1-208ENST00000563911 IZUMO3Q5VZ72 239 aa6.64□□□□□ -1.35
HERPUD1-208ENST00000563911 FAM160B1Q5W0V3 765 aa6.64□□□□□ -1.35
HERPUD1-208ENST00000563911 METRNLQ641Q3 311 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms