RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 SIK3Q9Y2K2 1263 aa17.78■□□□□ 0.44
PTPN21-208ENST00000556564 SLC45A1Q9Y2W3 748 aa17.78■□□□□ 0.44
PTPN21-208ENST00000556564 TMEM120BA0PK00 339 aa17.78■□□□□ 0.44
PTPN21-208ENST00000556564 SUPT7LO94864 414 aa17.78■□□□□ 0.44
PTPN21-208ENST00000556564 HIRAP54198 1017 aaPredicted RBP17.78■□□□□ 0.44
PTPN21-208ENST00000556564 TMEM259Q4ZIN3 620 aa17.78■□□□□ 0.44
PTPN21-208ENST00000556564 CES3Q6UWW8 571 aa17.78■□□□□ 0.44
PTPN21-208ENST00000556564 RRM2BQ7LG56 351 aa17.78■□□□□ 0.44
PTPN21-208ENST00000556564 SPATA20Q8TB22 786 aa17.78■□□□□ 0.44
PTPN21-208ENST00000556564 EPS8L3Q8TE67 593 aaKnown RBP17.78■□□□□ 0.44
PTPN21-208ENST00000556564 RSPH1Q8WYR4 309 aa17.78■□□□□ 0.44
PTPN21-208ENST00000556564 MFSD14AQ96MC6 490 aa17.78■□□□□ 0.44
PTPN21-208ENST00000556564 RUBCNLQ9H714 662 aa17.78■□□□□ 0.44
PTPN21-208ENST00000556564 SIGLEC16A6NMB1 481 aa17.78■□□□□ 0.44
PTPN21-208ENST00000556564 TGFB1I1O43294 461 aa17.78■□□□□ 0.44
PTPN21-208ENST00000556564 SH3D19Q5HYK7 790 aa17.78■□□□□ 0.44
PTPN21-208ENST00000556564 PPP2R2DQ66LE6 453 aa17.78■□□□□ 0.44
PTPN21-208ENST00000556564 KCNT2Q6UVM3 1135 aa17.78■□□□□ 0.44
PTPN21-208ENST00000556564 LRRC55Q6ZSA7 311 aa17.78■□□□□ 0.44
PTPN21-208ENST00000556564 BBS2Q9BXC9 721 aa17.78■□□□□ 0.44
PTPN21-208ENST00000556564 LNPEPQ9UIQ6 1025 aa17.78■□□□□ 0.44
PTPN21-208ENST00000556564 IGLV3-22A0A075B6J6 115 aa17.78■□□□□ 0.44
PTPN21-208ENST00000556564 ABCE1P61221 599 aaKnown RBP17.78■□□□□ 0.44
PTPN21-208ENST00000556564 MIIPQ5JXC2 388 aa17.78■□□□□ 0.44
PTPN21-208ENST00000556564 LRRC37A3O60309 1634 aa17.78■□□□□ 0.44
PTPN21-208ENST00000556564 GUCA1CO95843 209 aa17.77■□□□□ 0.44
PTPN21-208ENST00000556564 PSEN1P49768 467 aa17.77■□□□□ 0.44
PTPN21-208ENST00000556564 JAG1P78504 1218 aa17.77■□□□□ 0.44
PTPN21-208ENST00000556564 SMAD3P84022 425 aaKnown RBP17.77■□□□□ 0.44
PTPN21-208ENST00000556564 SPATA21Q7Z572 469 aa17.77■□□□□ 0.44
PTPN21-208ENST00000556564 CCNJLQ8IV13 435 aa17.77■□□□□ 0.44
PTPN21-208ENST00000556564 LRRC52Q8N7C0 313 aa17.77■□□□□ 0.44
PTPN21-208ENST00000556564 ROPN1BQ9BZX4 212 aaPredicted RBP17.77■□□□□ 0.44
PTPN21-208ENST00000556564 ROPN1Q9HAT0 212 aaPredicted RBP17.77■□□□□ 0.44
PTPN21-208ENST00000556564 SELENONQ9NZV5 590 aa17.77■□□□□ 0.44
PTPN21-208ENST00000556564 BOP1Q14137 746 aaKnown RBP17.77■□□□□ 0.44
PTPN21-208ENST00000556564 SERAC1Q96JX3 654 aa17.77■□□□□ 0.44
PTPN21-208ENST00000556564 SHOC2Q9UQ13 582 aa17.77■□□□□ 0.44
PTPN21-208ENST00000556564 A0A1W2PQH9 124 aa17.77■□□□□ 0.44
PTPN21-208ENST00000556564 STAU1O95793 577 aaKnown RBP17.77■□□□□ 0.44
PTPN21-208ENST00000556564 HSD17B3P37058 310 aa17.77■□□□□ 0.44
PTPN21-208ENST00000556564 SETMARQ53H47 684 aaPredicted RBP17.77■□□□□ 0.44
PTPN21-208ENST00000556564 SERPINA13PQ6UXR4 307 aa17.77■□□□□ 0.44
PTPN21-208ENST00000556564 PPP1R16AQ96I34 528 aa17.77■□□□□ 0.44
PTPN21-208ENST00000556564 FAM111AQ96PZ2 611 aa17.77■□□□□ 0.44
PTPN21-208ENST00000556564 MIR1-1HGQ9H1L0 117 aa17.77■□□□□ 0.44
PTPN21-208ENST00000556564 COPS7BQ9H9Q2 264 aaPredicted RBP17.77■□□□□ 0.44
PTPN21-208ENST00000556564 NAALADL1Q9UQQ1 740 aa17.77■□□□□ 0.44
PTPN21-208ENST00000556564 PCDHA3Q9Y5H8 950 aa17.77■□□□□ 0.44
PTPN21-208ENST00000556564 PHF20L1A8MW92 1017 aa17.77■□□□□ 0.43
PTPN21-208ENST00000556564 CSHL1Q14406 222 aa17.77■□□□□ 0.43
PTPN21-208ENST00000556564 KRT72Q14CN4 511 aa17.77■□□□□ 0.43
PTPN21-208ENST00000556564 CXorf40AQ8TE69 158 aa17.77■□□□□ 0.43
PTPN21-208ENST00000556564 OTULINQ96BN8 352 aa17.77■□□□□ 0.43
PTPN21-208ENST00000556564 TEX12Q9BXU0 123 aa17.77■□□□□ 0.43
PTPN21-208ENST00000556564 DUSP16Q9BY84 665 aa17.77■□□□□ 0.43
PTPN21-208ENST00000556564 IL1RL2Q9HB29 575 aa17.77■□□□□ 0.43
PTPN21-208ENST00000556564 AVENQ9NQS1 362 aaPredicted RBP17.77■□□□□ 0.43
PTPN21-208ENST00000556564 SEPT3Q9UH03 358 aa17.77■□□□□ 0.43
PTPN21-208ENST00000556564 PARNO95453 639 aaKnown RBP17.77■□□□□ 0.43
PTPN21-208ENST00000556564 KCNMA1Q12791 1236 aa17.77■□□□□ 0.43
PTPN21-208ENST00000556564 SLC9A9Q8IVB4 645 aa17.77■□□□□ 0.43
PTPN21-208ENST00000556564 SAE1Q9UBE0 346 aaPredicted RBP17.77■□□□□ 0.43
PTPN21-208ENST00000556564 NEDD8-MDP1E9PL57 170 aa17.76■□□□□ 0.43
PTPN21-208ENST00000556564 TLR5O60602 858 aa17.76■□□□□ 0.43
PTPN21-208ENST00000556564 ARIH2O95376 493 aa17.76■□□□□ 0.43
PTPN21-208ENST00000556564 CDH17Q12864 832 aa17.76■□□□□ 0.43
PTPN21-208ENST00000556564 PDCD2Q16342 344 aaPredicted RBP17.76■□□□□ 0.43
PTPN21-208ENST00000556564 DACT3Q96B18 629 aaPredicted RBP17.76■□□□□ 0.43
PTPN21-208ENST00000556564 LUC7L3O95232 432 aaKnown RBP17.76■□□□□ 0.43
PTPN21-208ENST00000556564 RPSAP08865 295 aaKnown RBP17.76■□□□□ 0.43
PTPN21-208ENST00000556564 SERPINA4P29622 427 aa17.76■□□□□ 0.43
PTPN21-208ENST00000556564 FPGSQ05932 587 aa17.76■□□□□ 0.43
PTPN21-208ENST00000556564 E2F7Q96AV8 911 aa17.76■□□□□ 0.43
PTPN21-208ENST00000556564 MTBPQ96DY7 904 aa17.76■□□□□ 0.43
PTPN21-208ENST00000556564 HSFY1Q96LI6 401 aa17.76■□□□□ 0.43
PTPN21-208ENST00000556564 C17orf80Q9BSJ5 609 aa17.76■□□□□ 0.43
PTPN21-208ENST00000556564 TM6SF2Q9BZW4 377 aa17.76■□□□□ 0.43
PTPN21-208ENST00000556564 MANSC1Q9H8J5 431 aa17.76■□□□□ 0.43
PTPN21-208ENST00000556564 GPAMQ9HCL2 828 aa17.76■□□□□ 0.43
PTPN21-208ENST00000556564 RIC8BQ9NVN3 520 aa17.76■□□□□ 0.43
PTPN21-208ENST00000556564 COL1A1P02452 1464 aaPredicted RBP17.76■□□□□ 0.43
PTPN21-208ENST00000556564 CLTBP09497 229 aa17.76■□□□□ 0.43
PTPN21-208ENST00000556564 PAX3P23760 479 aa17.76■□□□□ 0.43
PTPN21-208ENST00000556564 KDELR1P24390 212 aa17.76■□□□□ 0.43
PTPN21-208ENST00000556564 CHKAP35790 457 aa17.76■□□□□ 0.43
PTPN21-208ENST00000556564 PRR23CQ6ZRP0 262 aa17.76■□□□□ 0.43
PTPN21-208ENST00000556564 RIBC1Q8N443 379 aaPredicted RBP17.76■□□□□ 0.43
PTPN21-208ENST00000556564 POLR1EQ9GZS1 481 aaKnown RBP17.76■□□□□ 0.43
PTPN21-208ENST00000556564 FAM153AQ9UHL3 310 aa17.76■□□□□ 0.43
PTPN21-208ENST00000556564 FAM50BQ9Y247 325 aa17.76■□□□□ 0.43
PTPN21-208ENST00000556564 TIMM44O43615 452 aa17.76■□□□□ 0.43
PTPN21-208ENST00000556564 PYGBP11216 843 aa17.76■□□□□ 0.43
PTPN21-208ENST00000556564 RFC1P35251 1148 aaPredicted RBP17.76■□□□□ 0.43
PTPN21-208ENST00000556564 GALNTL6Q49A17 601 aa17.76■□□□□ 0.43
PTPN21-208ENST00000556564 AADACL2Q6P093 401 aa17.76■□□□□ 0.43
PTPN21-208ENST00000556564 USP45Q70EL2 814 aa17.76■□□□□ 0.43
PTPN21-208ENST00000556564 TSPAN18Q96SJ8 248 aa17.76■□□□□ 0.43
PTPN21-208ENST00000556564 ZYG11BQ9C0D3 744 aa17.76■□□□□ 0.43
PTPN21-208ENST00000556564 PSD3Q9NYI0 1048 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms