RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 GUCY1B2O75343 617 aa6.62□□□□□ -1.35
VPS29-210ENST00000552130 REC8O95072 547 aa6.62□□□□□ -1.35
VPS29-210ENST00000552130 PDE8BO95263 885 aa6.62□□□□□ -1.35
VPS29-210ENST00000552130 ADCY5O95622 1261 aa6.62□□□□□ -1.35
VPS29-210ENST00000552130 ABHD16AO95870 558 aa6.62□□□□□ -1.35
VPS29-210ENST00000552130 C4BPAP04003 597 aaKnown RBP6.62□□□□□ -1.35
VPS29-210ENST00000552130 GSTM1P09488 218 aa6.62□□□□□ -1.35
VPS29-210ENST00000552130 HMOX1P09601 288 aa6.62□□□□□ -1.35
VPS29-210ENST00000552130 ALADP13716 330 aa6.62□□□□□ -1.35
VPS29-210ENST00000552130 PECAM1P16284 738 aaPredicted RBP6.62□□□□□ -1.35
VPS29-210ENST00000552130 TYMPP19971 482 aa6.62□□□□□ -1.35
VPS29-210ENST00000552130 CPT2P23786 658 aa6.62□□□□□ -1.35
VPS29-210ENST00000552130 IL15P40933 162 aaPredicted RBP6.62□□□□□ -1.35
VPS29-210ENST00000552130 ACAA2P42765 397 aaKnown RBP6.62□□□□□ -1.35
VPS29-210ENST00000552130 ATP5OP48047 213 aa6.62□□□□□ -1.35
VPS29-210ENST00000552130 KCNJ5P48544 419 aa6.62□□□□□ -1.35
VPS29-210ENST00000552130 EIF4A1P60842 406 aaKnown RBP6.62□□□□□ -1.35
VPS29-210ENST00000552130 TLE1Q04724 770 aa6.62□□□□□ -1.35
VPS29-210ENST00000552130 NSUN2Q08J23 767 aaKnown RBP eCLIP6.62□□□□□ -1.35
VPS29-210ENST00000552130 MGAT5Q09328 741 aa6.62□□□□□ -1.35
VPS29-210ENST00000552130 RALGDSQ12967 914 aa6.62□□□□□ -1.35
VPS29-210ENST00000552130 RCN2Q14257 317 aa6.62□□□□□ -1.35
VPS29-210ENST00000552130 IRF3Q14653 427 aa6.62□□□□□ -1.35
VPS29-210ENST00000552130 PPP1R7Q15435 360 aa6.62□□□□□ -1.35
VPS29-210ENST00000552130 MED22Q15528 200 aa6.62□□□□□ -1.35
VPS29-210ENST00000552130 SLC5A9Q2M3M2 681 aa6.62□□□□□ -1.35
VPS29-210ENST00000552130 RABL6Q3YEC7 729 aaPredicted RBP6.62□□□□□ -1.35
VPS29-210ENST00000552130 BOLA3Q53S33 107 aa6.62□□□□□ -1.35
VPS29-210ENST00000552130 RAB41Q5JT25 222 aa6.62□□□□□ -1.35
VPS29-210ENST00000552130 EMC10Q5UCC4 262 aa6.62□□□□□ -1.35
VPS29-210ENST00000552130 FAM111BQ6SJ93 734 aa6.62□□□□□ -1.35
VPS29-210ENST00000552130 SUSD1Q6UWL2 747 aa6.62□□□□□ -1.35
VPS29-210ENST00000552130 ANGPTL8Q6UXH0 198 aa6.62□□□□□ -1.35
VPS29-210ENST00000552130 KANSL1Q7Z3B3 1105 aa6.62□□□□□ -1.35
VPS29-210ENST00000552130 ADGRG6Q86SQ4 1221 aa6.62□□□□□ -1.35
VPS29-210ENST00000552130 CCDC28AQ8IWP9 274 aa6.62□□□□□ -1.35
VPS29-210ENST00000552130 RHOT2Q8IXI1 618 aa6.62□□□□□ -1.35
VPS29-210ENST00000552130 YAF2Q8IY57 180 aa6.62□□□□□ -1.35
VPS29-210ENST00000552130 ADGRF2Q8IZF7 708 aa6.62□□□□□ -1.35
VPS29-210ENST00000552130 NLGN2Q8NFZ4 835 aa6.62□□□□□ -1.35
VPS29-210ENST00000552130 OR56A3Q8NH54 315 aa6.62□□□□□ -1.35
VPS29-210ENST00000552130 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.62□□□□□ -1.35
VPS29-210ENST00000552130 RNF139Q8WU17 664 aa6.62□□□□□ -1.35
VPS29-210ENST00000552130 MR1Q95460 341 aa6.62□□□□□ -1.35
VPS29-210ENST00000552130 FOXRED1Q96CU9 486 aaPredicted RBP6.62□□□□□ -1.35
VPS29-210ENST00000552130 TMX3Q96JJ7 454 aa6.62□□□□□ -1.35
VPS29-210ENST00000552130 PTCHD1Q96NR3 888 aa6.62□□□□□ -1.35
VPS29-210ENST00000552130 AGAP2Q99490 1192 aa6.62□□□□□ -1.35
VPS29-210ENST00000552130 VPS16Q9H269 839 aa6.62□□□□□ -1.35
VPS29-210ENST00000552130 ST6GALNAC4Q9H4F1 302 aa6.62□□□□□ -1.35
VPS29-210ENST00000552130 PDE11AQ9HCR9 933 aa6.62□□□□□ -1.35
VPS29-210ENST00000552130 IL1RAPL2Q9NP60 686 aa6.62□□□□□ -1.35
VPS29-210ENST00000552130 USP40Q9NVE5 1235 aa6.62□□□□□ -1.35
VPS29-210ENST00000552130 RBM28Q9NW13 759 aaKnown RBP6.62□□□□□ -1.35
VPS29-210ENST00000552130 MID2Q9UJV3 735 aa6.62□□□□□ -1.35
VPS29-210ENST00000552130 PALD1Q9ULE6 856 aa6.62□□□□□ -1.35
VPS29-210ENST00000552130 TMED5Q9Y3A6 229 aa6.62□□□□□ -1.35
VPS29-210ENST00000552130 TRPV2Q9Y5S1 764 aa6.62□□□□□ -1.35
VPS29-210ENST00000552130 ARPC4-TTLL3A0A0A6YYG9 625 aa6.61□□□□□ -1.35
VPS29-210ENST00000552130 C7orf72A4D263 438 aa6.61□□□□□ -1.35
VPS29-210ENST00000552130 PRAMEF25A6NGN4 478 aa6.61□□□□□ -1.35
VPS29-210ENST00000552130 GLOD5A6NK44 160 aa6.61□□□□□ -1.35
VPS29-210ENST00000552130 MYO1GB0I1T2 1018 aa6.61□□□□□ -1.35
VPS29-210ENST00000552130 TMEM232C9JQI7 657 aa6.61□□□□□ -1.35
VPS29-210ENST00000552130 M0QX08 132 aa6.61□□□□□ -1.35
VPS29-210ENST00000552130 CEP104O60308 925 aa6.61□□□□□ -1.35
VPS29-210ENST00000552130 PPP6R2O75170 966 aa6.61□□□□□ -1.35
VPS29-210ENST00000552130 MATN4O95460 622 aa6.61□□□□□ -1.35
VPS29-210ENST00000552130 RARGP13631 454 aa6.61□□□□□ -1.35
VPS29-210ENST00000552130 FDPSP14324 419 aaKnown RBP6.61□□□□□ -1.35
VPS29-210ENST00000552130 PTPN1P18031 435 aaKnown RBP6.61□□□□□ -1.35
VPS29-210ENST00000552130 KLRK1P26718 216 aa6.61□□□□□ -1.35
VPS29-210ENST00000552130 PRDX5P30044 214 aa6.61□□□□□ -1.35
VPS29-210ENST00000552130 HOXC8P31273 242 aa6.61□□□□□ -1.35
VPS29-210ENST00000552130 BMPR1AP36894 532 aa6.61□□□□□ -1.35
VPS29-210ENST00000552130 INHBEP58166 350 aa6.61□□□□□ -1.35
VPS29-210ENST00000552130 KCNJ10P78508 379 aa6.61□□□□□ -1.35
VPS29-210ENST00000552130 ZXDAP98168 799 aa6.61□□□□□ -1.35
VPS29-210ENST00000552130 EXOSC9Q06265 439 aaKnown RBP6.61□□□□□ -1.35
VPS29-210ENST00000552130 SCN1BQ07699 218 aa6.61□□□□□ -1.35
VPS29-210ENST00000552130 AIMP2Q13155 320 aaKnown RBP6.61□□□□□ -1.35
VPS29-210ENST00000552130 CTBP1Q13363 440 aa6.61□□□□□ -1.35
VPS29-210ENST00000552130 TDGQ13569 410 aa6.61□□□□□ -1.35
VPS29-210ENST00000552130 ITGA7Q13683 1181 aa6.61□□□□□ -1.35
VPS29-210ENST00000552130 BMPR2Q13873 1038 aa6.61□□□□□ -1.35
VPS29-210ENST00000552130 PTK6Q13882 451 aa6.61□□□□□ -1.35
VPS29-210ENST00000552130 CRYMQ14894 314 aa6.61□□□□□ -1.35
VPS29-210ENST00000552130 NHSL2Q5HYW2 709 aa6.61□□□□□ -1.35
VPS29-210ENST00000552130 CRELD2Q6UXH1 353 aaPredicted RBP6.61□□□□□ -1.35
VPS29-210ENST00000552130 CYP2R1Q6VVX0 501 aa6.61□□□□□ -1.35
VPS29-210ENST00000552130 FAM217AQ8IXS0 508 aa6.61□□□□□ -1.35
VPS29-210ENST00000552130 NAT16Q8N8M0 369 aa6.61□□□□□ -1.35
VPS29-210ENST00000552130 CCDC148Q8NFR7 591 aa6.61□□□□□ -1.35
VPS29-210ENST00000552130 GAB3Q8WWW8 586 aa6.61□□□□□ -1.35
VPS29-210ENST00000552130 PRPF31Q8WWY3 499 aaKnown RBP6.61□□□□□ -1.35
VPS29-210ENST00000552130 CPT1BQ92523 772 aa6.61□□□□□ -1.35
VPS29-210ENST00000552130 GBP4Q96PP9 640 aa6.61□□□□□ -1.35
VPS29-210ENST00000552130 LENG8Q96PV6 779 aaPredicted RBP6.61□□□□□ -1.35
VPS29-210ENST00000552130 ZPBPQ9BS86 351 aa6.61□□□□□ -1.35
VPS29-210ENST00000552130 C1orf43Q9BWL3 253 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms