RNA–Protein interactions for RNA: ENST00000543042.5

CLPB-212, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2 BASIC

Gene CLPB, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-212ENST00000543042 KCNK1O00180 336 aa18.54■□□□□ 0.56
CLPB-212ENST00000543042 BRAFP15056 766 aa18.54■□□□□ 0.56
CLPB-212ENST00000543042 SLC11A1P49279 550 aa18.54■□□□□ 0.56
CLPB-212ENST00000543042 TPI1P60174 286 aa18.54■□□□□ 0.56
CLPB-212ENST00000543042 USP46P62068 366 aa18.54■□□□□ 0.56
CLPB-212ENST00000543042 SCAPQ12770 1279 aa18.54■□□□□ 0.56
CLPB-212ENST00000543042 SF3A3Q12874 501 aaKnown RBP eCLIP18.54■□□□□ 0.56
CLPB-212ENST00000543042 RSPO2Q6UXX9 243 aaPredicted RBP18.54■□□□□ 0.56
CLPB-212ENST00000543042 TAS1R1Q7RTX1 841 aa18.54■□□□□ 0.56
CLPB-212ENST00000543042 DEFB128Q7Z7B8 93 aa18.54■□□□□ 0.56
CLPB-212ENST00000543042 ATP11CQ8NB49 1132 aa18.54■□□□□ 0.56
CLPB-212ENST00000543042 CASP10Q92851 521 aa18.54■□□□□ 0.56
CLPB-212ENST00000543042 SIK2Q9H0K1 926 aa18.54■□□□□ 0.56
CLPB-212ENST00000543042 MARCH5Q9NX47 278 aa18.54■□□□□ 0.56
CLPB-212ENST00000543042 A0A1W2PPM1 405 aa18.53■□□□□ 0.56
CLPB-212ENST00000543042 RASA4BC9J798 803 aa18.53■□□□□ 0.56
CLPB-212ENST00000543042 ANKRD65E5RJM6 399 aa18.53■□□□□ 0.56
CLPB-212ENST00000543042 RASA4O43374 803 aa18.53■□□□□ 0.56
CLPB-212ENST00000543042 LRIG2O94898 1065 aa18.53■□□□□ 0.56
CLPB-212ENST00000543042 SRGAP2BP0DMP2 458 aa18.53■□□□□ 0.56
CLPB-212ENST00000543042 PAX3P23760 479 aa18.53■□□□□ 0.56
CLPB-212ENST00000543042 PRMT2P55345 433 aa18.53■□□□□ 0.56
CLPB-212ENST00000543042 PAFAH1B3Q15102 231 aaKnown RBP18.53■□□□□ 0.56
CLPB-212ENST00000543042 CTXN3Q4LDR2 81 aa18.53■□□□□ 0.56
CLPB-212ENST00000543042 ARHGEF18Q6ZSZ5 1173 aa18.53■□□□□ 0.56
CLPB-212ENST00000543042 ZNF534Q76KX8 674 aa18.53■□□□□ 0.56
CLPB-212ENST00000543042 VPS52Q8N1B4 723 aa18.53■□□□□ 0.56
CLPB-212ENST00000543042 ZNF473Q8WTR7 871 aaKnown RBP18.53■□□□□ 0.56
CLPB-212ENST00000543042 SLC27A5Q9Y2P5 690 aa18.53■□□□□ 0.56
CLPB-212ENST00000543042 VWA8A3KMH1 1905 aa18.53■□□□□ 0.56
CLPB-212ENST00000543042 A0A1W2PQH9 124 aa18.53■□□□□ 0.56
CLPB-212ENST00000543042 SPAG7O75391 227 aa18.53■□□□□ 0.56
CLPB-212ENST00000543042 F9P00740 461 aa18.53■□□□□ 0.56
CLPB-212ENST00000543042 WASHC5Q12768 1159 aa18.53■□□□□ 0.56
CLPB-212ENST00000543042 PRKD1Q15139 912 aaPredicted RBP18.53■□□□□ 0.56
CLPB-212ENST00000543042 ARL13BQ3SXY8 428 aa18.53■□□□□ 0.56
CLPB-212ENST00000543042 BTBD8Q5XKL5 378 aa18.53■□□□□ 0.56
CLPB-212ENST00000543042 CRIPAKQ8N1N5 446 aa18.53■□□□□ 0.56
CLPB-212ENST00000543042 MPP5Q8N3R9 675 aa18.53■□□□□ 0.56
CLPB-212ENST00000543042 SEPT8Q92599 483 aa18.53■□□□□ 0.56
CLPB-212ENST00000543042 CFAP36Q96G28 342 aa18.53■□□□□ 0.56
CLPB-212ENST00000543042 PLAC1Q9HBJ0 212 aa18.53■□□□□ 0.56
CLPB-212ENST00000543042 PNPLA8Q9NP80 782 aa18.53■□□□□ 0.56
CLPB-212ENST00000543042 LRFN2Q9ULH4 789 aa18.53■□□□□ 0.56
CLPB-212ENST00000543042 NUP205Q92621 2012 aa18.53■□□□□ 0.56
CLPB-212ENST00000543042 ARHGEF37A1IGU5 675 aa18.52■□□□□ 0.56
CLPB-212ENST00000543042 RNF103O00237 685 aa18.52■□□□□ 0.56
CLPB-212ENST00000543042 ALDH2P05091 517 aa18.52■□□□□ 0.56
CLPB-212ENST00000543042 CCL5P13501 91 aa18.52■□□□□ 0.56
CLPB-212ENST00000543042 CYP2C18P33260 490 aa18.52■□□□□ 0.56
CLPB-212ENST00000543042 TADA2BQ86TJ2 420 aa18.52■□□□□ 0.56
CLPB-212ENST00000543042 PRPF39Q86UA1 669 aaKnown RBP18.52■□□□□ 0.56
CLPB-212ENST00000543042 COLGALT1Q8NBJ5 622 aa18.52■□□□□ 0.56
CLPB-212ENST00000543042 BCL7CQ8WUZ0 217 aaPredicted RBP18.52■□□□□ 0.56
CLPB-212ENST00000543042 PKNOX2Q96KN3 472 aa18.52■□□□□ 0.56
CLPB-212ENST00000543042 CRISPLD1Q9H336 500 aa18.52■□□□□ 0.56
CLPB-212ENST00000543042 A0A0A0MRY4 1105 aa18.52■□□□□ 0.55
CLPB-212ENST00000543042 TCRBV9S1A1TA0A576 114 aa18.52■□□□□ 0.55
CLPB-212ENST00000543042 TBKBP1A7MCY6 615 aa18.52■□□□□ 0.55
CLPB-212ENST00000543042 SMAPO00193 183 aa18.52■□□□□ 0.55
CLPB-212ENST00000543042 UPP2O95045 317 aa18.52■□□□□ 0.55
CLPB-212ENST00000543042 FAM107AO95990 144 aa18.52■□□□□ 0.55
CLPB-212ENST00000543042 IGLV3-25P01717 112 aa18.52■□□□□ 0.55
CLPB-212ENST00000543042 EPHB2P29323 1055 aa18.52■□□□□ 0.55
CLPB-212ENST00000543042 GEMIN4P57678 1058 aaKnown RBP18.52■□□□□ 0.55
CLPB-212ENST00000543042 OLIG2Q13516 323 aa18.52■□□□□ 0.55
CLPB-212ENST00000543042 EIF4EBP2Q13542 120 aaPredicted RBP18.52■□□□□ 0.55
CLPB-212ENST00000543042 RTP2Q5QGT7 225 aa18.52■□□□□ 0.55
CLPB-212ENST00000543042 TRABD2AQ86V40 505 aa18.52■□□□□ 0.55
CLPB-212ENST00000543042 C4orf33Q8N1A6 199 aa18.52■□□□□ 0.55
CLPB-212ENST00000543042 SCML4Q8N228 414 aa18.52■□□□□ 0.55
CLPB-212ENST00000543042 CENPTQ96BT3 561 aa18.52■□□□□ 0.55
CLPB-212ENST00000543042 CELF6Q96J87 481 aaKnown RBP18.52■□□□□ 0.55
CLPB-212ENST00000543042 SPATA13Q96N96 652 aa18.52■□□□□ 0.55
CLPB-212ENST00000543042 ELAC1Q9H777 363 aaKnown RBP18.52■□□□□ 0.55
CLPB-212ENST00000543042 RRN3Q9NYV6 651 aa18.52■□□□□ 0.55
CLPB-212ENST00000543042 ATP5DP30049 168 aa18.51■□□□□ 0.55
CLPB-212ENST00000543042 MAGEA6P43360 314 aa18.51■□□□□ 0.55
CLPB-212ENST00000543042 AIF1P55008 147 aa18.51■□□□□ 0.55
CLPB-212ENST00000543042 DCP1BQ8IZD4 617 aaKnown RBP18.51■□□□□ 0.55
CLPB-212ENST00000543042 ZNF567Q8N184 647 aa18.51■□□□□ 0.55
CLPB-212ENST00000543042 PDCD7Q8N8D1 485 aaKnown RBP18.51■□□□□ 0.55
CLPB-212ENST00000543042 GDAP1Q8TB36 358 aa18.51■□□□□ 0.55
CLPB-212ENST00000543042 PAFAH2Q99487 392 aa18.51■□□□□ 0.55
CLPB-212ENST00000543042 PHACTR1Q9C0D0 580 aa18.51■□□□□ 0.55
CLPB-212ENST00000543042 HIPK3Q9H422 1215 aa18.51■□□□□ 0.55
CLPB-212ENST00000543042 ACSS3Q9H6R3 686 aa18.51■□□□□ 0.55
CLPB-212ENST00000543042 ABCC13Q9NSE7 274 aa18.51■□□□□ 0.55
CLPB-212ENST00000543042 HACD1B0YJ81 288 aa18.5■□□□□ 0.55
CLPB-212ENST00000543042 PITPNM1O00562 1244 aa18.5■□□□□ 0.55
CLPB-212ENST00000543042 KRT15P19012 456 aa18.5■□□□□ 0.55
CLPB-212ENST00000543042 PHBP35232 272 aa18.5■□□□□ 0.55
CLPB-212ENST00000543042 MRPL58Q14197 206 aaKnown RBP18.5■□□□□ 0.55
CLPB-212ENST00000543042 PDK1Q15118 436 aa18.5■□□□□ 0.55
CLPB-212ENST00000543042 KBTBD12Q3ZCT8 623 aa18.5■□□□□ 0.55
CLPB-212ENST00000543042 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.5■□□□□ 0.554e-6■■■■□ 20.5
CLPB-212ENST00000543042 BZW1Q7L1Q6 419 aaKnown RBP18.5■□□□□ 0.55
CLPB-212ENST00000543042 TDRPQ86YL5 185 aa18.5■□□□□ 0.55
CLPB-212ENST00000543042 IRAK2O43187 625 aa18.5■□□□□ 0.55
CLPB-212ENST00000543042 COL6A1P12109 1028 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 134.9 ms