RNA–Protein interactions for RNA: ENST00000520746.1

HDAC2-208, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-208ENST00000520746 ATP5F1P24539 256 aaPredicted RBP4.25□□□□□ -1.73
HDAC2-208ENST00000520746 EIF4A1P60842 406 aaKnown RBP4.25□□□□□ -1.73
HDAC2-208ENST00000520746 NSUN2Q08J23 767 aaKnown RBP eCLIP4.25□□□□□ -1.73
HDAC2-208ENST00000520746 ATP1A4Q13733 1029 aa4.25□□□□□ -1.73
HDAC2-208ENST00000520746 TRIM14Q14142 442 aa4.25□□□□□ -1.73
HDAC2-208ENST00000520746 NPATQ14207 1427 aa4.25□□□□□ -1.73
HDAC2-208ENST00000520746 CLCA4Q14CN2 919 aa4.25□□□□□ -1.73
HDAC2-208ENST00000520746 PTPRKQ15262 1439 aa4.25□□□□□ -1.73
HDAC2-208ENST00000520746 PUM3Q15397 648 aaKnown RBP4.25□□□□□ -1.73
HDAC2-208ENST00000520746 ELF2Q15723 593 aa4.25□□□□□ -1.73
HDAC2-208ENST00000520746 MEX3CQ5U5Q3 659 aaKnown RBP4.25□□□□□ -1.73
HDAC2-208ENST00000520746 ARL6IP4Q66PJ3 421 aaKnown RBP4.25□□□□□ -1.73
HDAC2-208ENST00000520746 SHC4Q6S5L8 630 aa4.25□□□□□ -1.73
HDAC2-208ENST00000520746 SUN3Q8TAQ9 357 aa4.25□□□□□ -1.73
HDAC2-208ENST00000520746 COQ8BQ96D53 544 aa4.25□□□□□ -1.73
HDAC2-208ENST00000520746 LENG8Q96PV6 779 aaPredicted RBP4.25□□□□□ -1.73
HDAC2-208ENST00000520746 OBP2BQ9NPH6 170 aa4.25□□□□□ -1.73
HDAC2-208ENST00000520746 TRIM36Q9NQ86 728 aa4.25□□□□□ -1.73
HDAC2-208ENST00000520746 IGSF9Q9P2J2 1179 aa4.25□□□□□ -1.73
HDAC2-208ENST00000520746 MGAT4CQ9UBM8 478 aa4.25□□□□□ -1.73
HDAC2-208ENST00000520746 LPAR3Q9UBY5 353 aa4.25□□□□□ -1.73
HDAC2-208ENST00000520746 AMFRQ9UKV5 643 aa4.25□□□□□ -1.73
HDAC2-208ENST00000520746 COL15A1P39059 1388 aa4.25□□□□□ -1.73
HDAC2-208ENST00000520746 MTUS2Q5JR59 1369 aa4.25□□□□□ -1.73
HDAC2-208ENST00000520746 TNRQ92752 1358 aa4.25□□□□□ -1.73
HDAC2-208ENST00000520746 SIGLEC1Q9BZZ2 1709 aa4.24□□□□□ -1.73
HDAC2-208ENST00000520746 AQP12BA6NM10 295 aa4.24□□□□□ -1.73
HDAC2-208ENST00000520746 H7C1Q1 480 aa4.24□□□□□ -1.73
HDAC2-208ENST00000520746 FCHO1O14526 889 aa4.24□□□□□ -1.73
HDAC2-208ENST00000520746 SKAP2O75563 359 aaPredicted RBP4.24□□□□□ -1.73
HDAC2-208ENST00000520746 WDR47O94967 919 aa4.24□□□□□ -1.73
HDAC2-208ENST00000520746 TJP3O95049 919 aa4.24□□□□□ -1.73
HDAC2-208ENST00000520746 VIPP01282 170 aa4.24□□□□□ -1.73
HDAC2-208ENST00000520746 TMEM225BP0DP42 221 aa4.24□□□□□ -1.73
HDAC2-208ENST00000520746 SLC5A2P31639 672 aa4.24□□□□□ -1.73
HDAC2-208ENST00000520746 HTR7P34969 479 aa4.24□□□□□ -1.73
HDAC2-208ENST00000520746 PSG6Q00889 435 aa4.24□□□□□ -1.73
HDAC2-208ENST00000520746 ICA1Q05084 483 aa4.24□□□□□ -1.73
HDAC2-208ENST00000520746 ST3GAL2Q16842 350 aa4.24□□□□□ -1.73
HDAC2-208ENST00000520746 MTHFD1LQ6UB35 978 aa4.24□□□□□ -1.73
HDAC2-208ENST00000520746 PTCHD4Q6ZW05 846 aa4.24□□□□□ -1.73
HDAC2-208ENST00000520746 RASGRP3Q8IV61 690 aa4.24□□□□□ -1.73
HDAC2-208ENST00000520746 P3H2Q8IVL5 708 aa4.24□□□□□ -1.73
HDAC2-208ENST00000520746 C16orf52Q8NHV5 167 aa4.24□□□□□ -1.73
HDAC2-208ENST00000520746 CTHRC1Q96CG8 243 aa4.24□□□□□ -1.73
HDAC2-208ENST00000520746 WDYHV1Q96HA8 205 aa4.24□□□□□ -1.73
HDAC2-208ENST00000520746 VPS50Q96JG6 964 aa4.24□□□□□ -1.73
HDAC2-208ENST00000520746 PRPF18Q99633 342 aaKnown RBP4.24□□□□□ -1.73
HDAC2-208ENST00000520746 EPS8L2Q9H6S3 715 aa4.24□□□□□ -1.73
HDAC2-208ENST00000520746 SCAF8Q9UPN6 1271 aaKnown RBP4.24□□□□□ -1.73
HDAC2-208ENST00000520746 A2MP01023 1474 aa4.24□□□□□ -1.73
HDAC2-208ENST00000520746 SHANK2Q9UPX8 1470 aa4.24□□□□□ -1.73
HDAC2-208ENST00000520746 MYO5CQ9NQX4 1742 aa4.24□□□□□ -1.73
HDAC2-208ENST00000520746 DIP2CQ9Y2E4 1556 aa4.23□□□□□ -1.73
HDAC2-208ENST00000520746 C3P01024 1663 aa4.23□□□□□ -1.73
HDAC2-208ENST00000520746 AGLP35573 1532 aa4.23□□□□□ -1.73
HDAC2-208ENST00000520746 LY6G6EA0A0G2JKS1 128 aa4.23□□□□□ -1.73
HDAC2-208ENST00000520746 FAM90A10PA6NDY2 464 aa4.23□□□□□ -1.73
HDAC2-208ENST00000520746 LGALS16A8MUM7 142 aa4.23□□□□□ -1.73
HDAC2-208ENST00000520746 A8MVJ9 347 aa4.23□□□□□ -1.73
HDAC2-208ENST00000520746 POC1B-GALNT4F8VUJ3 575 aa4.23□□□□□ -1.73
HDAC2-208ENST00000520746 M0R3H8 397 aa4.23□□□□□ -1.73
HDAC2-208ENST00000520746 EXOC3O60645 756 aa4.23□□□□□ -1.73
HDAC2-208ENST00000520746 USP1O94782 785 aa4.23□□□□□ -1.73
HDAC2-208ENST00000520746 FGAP02671 866 aa4.23□□□□□ -1.73
HDAC2-208ENST00000520746 CYP2A6P11509 494 aaPredicted RBP4.23□□□□□ -1.73
HDAC2-208ENST00000520746 MYCLP12524 364 aaPredicted RBP4.23□□□□□ -1.73
HDAC2-208ENST00000520746 DRD1P21728 446 aa4.23□□□□□ -1.73
HDAC2-208ENST00000520746 FPR3P25089 353 aa4.23□□□□□ -1.73
HDAC2-208ENST00000520746 MCM5P33992 734 aa4.23□□□□□ -1.73
HDAC2-208ENST00000520746 PBX1P40424 430 aa4.23□□□□□ -1.73
HDAC2-208ENST00000520746 TRAPPC10P48553 1259 aa4.23□□□□□ -1.73
HDAC2-208ENST00000520746 THBS3P49746 956 aa4.23□□□□□ -1.73
HDAC2-208ENST00000520746 DEUP1Q05D60 604 aa4.23□□□□□ -1.73
HDAC2-208ENST00000520746 SPARCL1Q14515 664 aa4.23□□□□□ -1.73
HDAC2-208ENST00000520746 PFKFB4Q16877 469 aa4.23□□□□□ -1.73
HDAC2-208ENST00000520746 TRIM71Q2Q1W2 868 aaKnown RBP4.23□□□□□ -1.73
HDAC2-208ENST00000520746 P3H1Q32P28 736 aa4.23□□□□□ -1.73
HDAC2-208ENST00000520746 DENND2CQ68D51 928 aa4.23□□□□□ -1.73
HDAC2-208ENST00000520746 CCDC174Q6PII3 467 aa4.23□□□□□ -1.73
HDAC2-208ENST00000520746 KIRREL2Q6UWL6 708 aa4.23□□□□□ -1.73
HDAC2-208ENST00000520746 DLK2Q6UY11 383 aa4.23□□□□□ -1.73
HDAC2-208ENST00000520746 GALNT4Q8N4A0 578 aa4.23□□□□□ -1.73
HDAC2-208ENST00000520746 ATG16L2Q8NAA4 619 aa4.23□□□□□ -1.73
HDAC2-208ENST00000520746 NGDNQ8NEJ9 315 aaKnown RBP4.23□□□□□ -1.73
HDAC2-208ENST00000520746 STYXQ8WUJ0 223 aa4.23□□□□□ -1.73
HDAC2-208ENST00000520746 DAZAP1Q96EP5 407 aaKnown RBP4.23□□□□□ -1.73
HDAC2-208ENST00000520746 FAM118BQ9BPY3 351 aa4.23□□□□□ -1.73
HDAC2-208ENST00000520746 SNX15Q9NRS6 342 aa4.23□□□□□ -1.73
HDAC2-208ENST00000520746 LRFN1Q9P244 771 aa4.23□□□□□ -1.73
HDAC2-208ENST00000520746 ASAP1Q9ULH1 1129 aa4.23□□□□□ -1.73
HDAC2-208ENST00000520746 DTNAQ9Y4J8 743 aa4.23□□□□□ -1.73
HDAC2-208ENST00000520746 CCDC18Q5T9S5 1454 aa4.23□□□□□ -1.73
HDAC2-208ENST00000520746 PNMA6EA0A0J9YXQ4 647 aa4.22□□□□□ -1.73
HDAC2-208ENST00000520746 OR2W5A6NFC9 320 aa4.22□□□□□ -1.73
HDAC2-208ENST00000520746 J3KTA2 159 aa4.22□□□□□ -1.73
HDAC2-208ENST00000520746 ADAM10O14672 748 aa4.22□□□□□ -1.73
HDAC2-208ENST00000520746 NPC1O15118 1278 aa4.22□□□□□ -1.73
HDAC2-208ENST00000520746 CA12O43570 354 aa4.22□□□□□ -1.73
HDAC2-208ENST00000520746 ASNA1O43681 348 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms