RNA–Protein interactions for RNA: ENST00000517880.1

CPEB4-203, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 1 (best) BASIC

Gene CPEB4, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-203ENST00000517880 ANKRD20A2Q5SQ80 823 aa11.09□□□□□ -0.63
CPEB4-203ENST00000517880 VARS2Q5ST30 1063 aaKnown RBP11.09□□□□□ -0.63
CPEB4-203ENST00000517880 ANKRD20A1Q5TYW2 823 aa11.09□□□□□ -0.63
CPEB4-203ENST00000517880 ANKRD20A3Q5VUR7 823 aa11.09□□□□□ -0.63
CPEB4-203ENST00000517880 MICALCLQ6ZW33 695 aa11.09□□□□□ -0.63
CPEB4-203ENST00000517880 CYS1Q717R9 158 aa11.09□□□□□ -0.63
CPEB4-203ENST00000517880 ANKRD33Q7Z3H0 272 aa11.09□□□□□ -0.63
CPEB4-203ENST00000517880 NLRP14Q86W24 1093 aa11.09□□□□□ -0.63
CPEB4-203ENST00000517880 NPAS4Q8IUM7 802 aa11.09□□□□□ -0.63
CPEB4-203ENST00000517880 CCNJLQ8IV13 435 aa11.09□□□□□ -0.63
CPEB4-203ENST00000517880 CCDC13Q8IYE1 715 aa11.09□□□□□ -0.63
CPEB4-203ENST00000517880 NUP93Q8N1F7 819 aa11.09□□□□□ -0.63
CPEB4-203ENST00000517880 LZTR1Q8N653 840 aa11.09□□□□□ -0.63
CPEB4-203ENST00000517880 DQX1Q8TE96 717 aaKnown RBP11.09□□□□□ -0.63
CPEB4-203ENST00000517880 RNF34Q969K3 372 aa11.09□□□□□ -0.63
CPEB4-203ENST00000517880 CEP295NLQ96MC4 621 aa11.09□□□□□ -0.63
CPEB4-203ENST00000517880 TOX2Q96NM4 488 aa11.09□□□□□ -0.63
CPEB4-203ENST00000517880 CCT8L2Q96SF2 557 aa11.09□□□□□ -0.63
CPEB4-203ENST00000517880 TMEM209Q96SK2 561 aa11.09□□□□□ -0.63
CPEB4-203ENST00000517880 CYTH2Q99418 400 aa11.09□□□□□ -0.63
CPEB4-203ENST00000517880 VAT1Q99536 393 aa11.09□□□□□ -0.63
CPEB4-203ENST00000517880 FAM107BQ9H098 131 aa11.09□□□□□ -0.63
CPEB4-203ENST00000517880 UNC93B1Q9H1C4 597 aa11.09□□□□□ -0.63
CPEB4-203ENST00000517880 ACSS3Q9H6R3 686 aa11.09□□□□□ -0.63
CPEB4-203ENST00000517880 SSU72Q9NP77 194 aaKnown RBP11.09□□□□□ -0.63
CPEB4-203ENST00000517880 EIF2B3Q9NR50 452 aaKnown RBP11.09□□□□□ -0.63
CPEB4-203ENST00000517880 ARHGEF38Q9NXL2 777 aa11.09□□□□□ -0.63
CPEB4-203ENST00000517880 IL37Q9NZH6 218 aa11.09□□□□□ -0.63
CPEB4-203ENST00000517880 COX16Q9P0S2 106 aa11.09□□□□□ -0.63
CPEB4-203ENST00000517880 PSMC3IPQ9P2W1 217 aaPredicted RBP11.09□□□□□ -0.63
CPEB4-203ENST00000517880 PATJQ8NI35 1801 aa11.08□□□□□ -0.64
CPEB4-203ENST00000517880 PTPRDP23468 1912 aa11.08□□□□□ -0.64
CPEB4-203ENST00000517880 NLRC5Q86WI3 1866 aa11.08□□□□□ -0.64
CPEB4-203ENST00000517880 RTN3O95197 1032 aaPredicted RBP11.08□□□□□ -0.64
CPEB4-203ENST00000517880 BRAFP15056 766 aa11.08□□□□□ -0.64
CPEB4-203ENST00000517880 ERCC2P18074 760 aa11.08□□□□□ -0.64
CPEB4-203ENST00000517880 CCR1P32246 355 aa11.08□□□□□ -0.64
CPEB4-203ENST00000517880 STX2P32856 288 aa11.08□□□□□ -0.64
CPEB4-203ENST00000517880 ELK3P41970 407 aa11.08□□□□□ -0.64
CPEB4-203ENST00000517880 PSEN1P49768 467 aa11.08□□□□□ -0.64
CPEB4-203ENST00000517880 SLC5A3P53794 718 aa11.08□□□□□ -0.64
CPEB4-203ENST00000517880 NRG1Q02297 640 aaPredicted RBP11.08□□□□□ -0.64
CPEB4-203ENST00000517880 GPNMBQ14956 572 aa11.08□□□□□ -0.64
CPEB4-203ENST00000517880 FASTKD3Q14CZ7 662 aaKnown RBP11.08□□□□□ -0.64
CPEB4-203ENST00000517880 CTXN3Q4LDR2 81 aa11.08□□□□□ -0.64
CPEB4-203ENST00000517880 MSS51Q4VC12 460 aa11.08□□□□□ -0.64
CPEB4-203ENST00000517880 TTC19Q6DKK2 380 aaPredicted RBP11.08□□□□□ -0.64
CPEB4-203ENST00000517880 ADGRD1Q6QNK2 874 aa11.08□□□□□ -0.64
CPEB4-203ENST00000517880 ANKMY2Q8IV38 441 aa11.08□□□□□ -0.64
CPEB4-203ENST00000517880 CCDC110Q8TBZ0 833 aa11.08□□□□□ -0.64
CPEB4-203ENST00000517880 SPPL2BQ8TCT7 592 aa11.08□□□□□ -0.64
CPEB4-203ENST00000517880 SH3TC2Q8TF17 1288 aa11.08□□□□□ -0.64
CPEB4-203ENST00000517880 EDEM1Q92611 657 aa11.08□□□□□ -0.64
CPEB4-203ENST00000517880 SGSM3Q96HU1 749 aa11.08□□□□□ -0.64
CPEB4-203ENST00000517880 BEGAINQ9BUH8 593 aa11.08□□□□□ -0.64
CPEB4-203ENST00000517880 RHOBTB2Q9BYZ6 727 aa11.08□□□□□ -0.64
CPEB4-203ENST00000517880 MAGEB5Q9BZ81 275 aa11.08□□□□□ -0.64
CPEB4-203ENST00000517880 TKTL2Q9H0I9 626 aa11.08□□□□□ -0.64
CPEB4-203ENST00000517880 SMOC2Q9H3U7 446 aa11.08□□□□□ -0.64
CPEB4-203ENST00000517880 PPANQ9NQ55 473 aaKnown RBP11.08□□□□□ -0.64
CPEB4-203ENST00000517880 DONSONQ9NYP3 566 aa11.08□□□□□ -0.64
CPEB4-203ENST00000517880 NKIRAS1Q9NYS0 192 aa11.08□□□□□ -0.64
CPEB4-203ENST00000517880 FNIP2Q9P278 1114 aa11.08□□□□□ -0.64
CPEB4-203ENST00000517880 IGSF9Q9P2J2 1179 aa11.08□□□□□ -0.64
CPEB4-203ENST00000517880 OR12D3Q9UGF7 316 aa11.08□□□□□ -0.64
CPEB4-203ENST00000517880 TRHDEQ9UKU6 1024 aa11.08□□□□□ -0.64
CPEB4-203ENST00000517880 SMG5Q9UPR3 1016 aaKnown RBP11.08□□□□□ -0.64
CPEB4-203ENST00000517880 PRG3Q9Y2Y8 225 aaPredicted RBP11.08□□□□□ -0.64
CPEB4-203ENST00000517880 CLUHO75153 1309 aa11.07□□□□□ -0.64
CPEB4-203ENST00000517880 CARNS1A5YM72 827 aa11.07□□□□□ -0.64
CPEB4-203ENST00000517880 ERI2A8K979 691 aaKnown RBP11.07□□□□□ -0.64
CPEB4-203ENST00000517880 RASA4BC9J798 803 aa11.07□□□□□ -0.64
CPEB4-203ENST00000517880 POC1B-GALNT4F8VUJ3 575 aa11.07□□□□□ -0.64
CPEB4-203ENST00000517880 AP3B1O00203 1094 aa11.07□□□□□ -0.64
CPEB4-203ENST00000517880 FGF10O15520 208 aaPredicted RBP11.07□□□□□ -0.64
CPEB4-203ENST00000517880 IRAK2O43187 625 aa11.07□□□□□ -0.64
CPEB4-203ENST00000517880 PSMD3O43242 534 aa11.07□□□□□ -0.64
CPEB4-203ENST00000517880 RASA4O43374 803 aa11.07□□□□□ -0.64
CPEB4-203ENST00000517880 MFSD11O43934 449 aa11.07□□□□□ -0.64
CPEB4-203ENST00000517880 B4GALT3O60512 393 aa11.07□□□□□ -0.64
CPEB4-203ENST00000517880 APRTP07741 180 aa11.07□□□□□ -0.64
CPEB4-203ENST00000517880 GCAP28676 217 aa11.07□□□□□ -0.64
CPEB4-203ENST00000517880 GBP2P32456 591 aaPredicted RBP11.07□□□□□ -0.64
CPEB4-203ENST00000517880 MSH2P43246 934 aa11.07□□□□□ -0.64
CPEB4-203ENST00000517880 MAGEA3P43357 314 aa11.07□□□□□ -0.64
CPEB4-203ENST00000517880 RABGGTBP53611 331 aa11.07□□□□□ -0.64
CPEB4-203ENST00000517880 PPIDQ08752 370 aaKnown RBP11.07□□□□□ -0.64
CPEB4-203ENST00000517880 AP1B1Q10567 949 aa11.07□□□□□ -0.64
CPEB4-203ENST00000517880 GPR17Q13304 367 aa11.07□□□□□ -0.64
CPEB4-203ENST00000517880 LGSNQ5TDP6 509 aa11.07□□□□□ -0.64
CPEB4-203ENST00000517880 FAM171A1Q5VUB5 890 aa11.07□□□□□ -0.64
CPEB4-203ENST00000517880 C1orf53Q5VUE5 145 aa11.07□□□□□ -0.64
CPEB4-203ENST00000517880 MSANTD2Q6P1R3 559 aa11.07□□□□□ -0.64
CPEB4-203ENST00000517880 SLC39A5Q6ZMH5 540 aa11.07□□□□□ -0.64
CPEB4-203ENST00000517880 ANKS3Q6ZW76 656 aa11.07□□□□□ -0.64
CPEB4-203ENST00000517880 TAC4Q86UU9 113 aa11.07□□□□□ -0.64
CPEB4-203ENST00000517880 TRABD2AQ86V40 505 aa11.07□□□□□ -0.64
CPEB4-203ENST00000517880 CAND1Q86VP6 1230 aaKnown RBP11.07□□□□□ -0.64
CPEB4-203ENST00000517880 LRRC49Q8IUZ0 686 aa11.07□□□□□ -0.64
CPEB4-203ENST00000517880 SCN4BQ8IWT1 228 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms