RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 C1orf220Q5T0J3 134 aa14.88□□□□□ -0.03
VARS-228ENST00000495010 LAYNQ6UX15 382 aa14.88□□□□□ -0.03
VARS-228ENST00000495010 PIGZQ86VD9 579 aa14.88□□□□□ -0.03
VARS-228ENST00000495010 TMPRSS12Q86WS5 348 aa14.88□□□□□ -0.03
VARS-228ENST00000495010 FMNL3Q8IVF7 1028 aa14.88□□□□□ -0.03
VARS-228ENST00000495010 FAM217AQ8IXS0 508 aa14.88□□□□□ -0.03
VARS-228ENST00000495010 AHI1Q8N157 1196 aa14.88□□□□□ -0.03
VARS-228ENST00000495010 CCDC47Q96A33 483 aaKnown RBP14.88□□□□□ -0.03
VARS-228ENST00000495010 PAGE5Q96GU1 130 aa14.88□□□□□ -0.03
VARS-228ENST00000495010 TMEM176AQ96HP8 235 aa14.88□□□□□ -0.03
VARS-228ENST00000495010 ACE2Q9BYF1 805 aaPredicted RBP14.88□□□□□ -0.03
VARS-228ENST00000495010 TMEM245Q9H330 911 aa14.88□□□□□ -0.03
VARS-228ENST00000495010 LRRC4Q9HBW1 653 aa14.88□□□□□ -0.03
VARS-228ENST00000495010 ABCB8Q9NUT2 735 aa14.88□□□□□ -0.03
VARS-228ENST00000495010 GGA2Q9UJY4 613 aa14.88□□□□□ -0.03
VARS-228ENST00000495010 ACACAQ13085 2346 aa14.87□□□□□ -0.03
VARS-228ENST00000495010 K7ELQ4 463 aaPredicted RBP14.87□□□□□ -0.03
VARS-228ENST00000495010 PABPC1P11940 636 aaKnown RBP14.87□□□□□ -0.03
VARS-228ENST00000495010 JUPP14923 745 aa14.87□□□□□ -0.03
VARS-228ENST00000495010 POLR2EP19388 210 aaKnown RBP14.87□□□□□ -0.03
VARS-228ENST00000495010 NR2F2P24468 414 aa14.87□□□□□ -0.03
VARS-228ENST00000495010 CAMK2BQ13554 666 aa14.87□□□□□ -0.03
VARS-228ENST00000495010 TRIP4Q15650 581 aaPredicted RBP14.87□□□□□ -0.03
VARS-228ENST00000495010 PTPRNQ16849 979 aa14.87□□□□□ -0.03
VARS-228ENST00000495010 RAB41Q5JT25 222 aa14.87□□□□□ -0.03
VARS-228ENST00000495010 C6orf118Q5T5N4 469 aa14.87□□□□□ -0.03
VARS-228ENST00000495010 ZNF776Q68DI1 518 aaPredicted RBP14.87□□□□□ -0.03
VARS-228ENST00000495010 LRRC69Q6ZNQ3 347 aa14.87□□□□□ -0.03
VARS-228ENST00000495010 FAM186BQ8IYM0 893 aa14.87□□□□□ -0.03
VARS-228ENST00000495010 IPO9Q96P70 1041 aaKnown RBP14.87□□□□□ -0.03
VARS-228ENST00000495010 UBL7Q96S82 380 aaPredicted RBP14.87□□□□□ -0.03
VARS-228ENST00000495010 ULBP1Q9BZM6 244 aa14.87□□□□□ -0.03
VARS-228ENST00000495010 TMEM8AQ9HCN3 771 aa14.87□□□□□ -0.03
VARS-228ENST00000495010 PRSS16Q9NQE7 514 aa14.87□□□□□ -0.03
VARS-228ENST00000495010 TRAF3IP3Q9Y228 551 aa14.87□□□□□ -0.03
VARS-228ENST00000495010 HBS1LQ9Y450 684 aaKnown RBP14.87□□□□□ -0.03
VARS-228ENST00000495010 ITPR1Q14643 2758 aa14.86□□□□□ -0.03
VARS-228ENST00000495010 FAM47DPA6NHR8 397 aa14.86□□□□□ -0.03
VARS-228ENST00000495010 PLK4O00444 970 aa14.86□□□□□ -0.03
VARS-228ENST00000495010 RNASEH1O60930 286 aaKnown RBP14.86□□□□□ -0.03
VARS-228ENST00000495010 DLDP09622 509 aaKnown RBP14.86□□□□□ -0.03
VARS-228ENST00000495010 ABCB4P21439 1286 aa14.86□□□□□ -0.03
VARS-228ENST00000495010 RPL13P26373 211 aaKnown RBP14.86□□□□□ -0.03
VARS-228ENST00000495010 PSMC2P35998 433 aaKnown RBP14.86□□□□□ -0.03
VARS-228ENST00000495010 CTSKP43235 329 aa14.86□□□□□ -0.03
VARS-228ENST00000495010 ST8SIA6P61647 398 aa14.86□□□□□ -0.03
VARS-228ENST00000495010 RACK1P63244 317 aaKnown RBP14.86□□□□□ -0.03
VARS-228ENST00000495010 PPP3CAQ08209 521 aa14.86□□□□□ -0.03
VARS-228ENST00000495010 C19orf57Q0VDD7 668 aa14.86□□□□□ -0.03
VARS-228ENST00000495010 ADGRF1Q5T601 910 aa14.86□□□□□ -0.03
VARS-228ENST00000495010 MBLAC2Q68D91 279 aa14.86□□□□□ -0.03
VARS-228ENST00000495010 KIAA0895LQ68EN5 471 aa14.86□□□□□ -0.03
VARS-228ENST00000495010 KRT39Q6A163 491 aa14.86□□□□□ -0.03
VARS-228ENST00000495010 ANKRD52Q8NB46 1076 aa14.86□□□□□ -0.03
VARS-228ENST00000495010 PIP4K2CQ8TBX8 421 aa14.86□□□□□ -0.03
VARS-228ENST00000495010 NXPE2Q96DL1 559 aa14.86□□□□□ -0.03
VARS-228ENST00000495010 CISHQ9NSE2 258 aa14.86□□□□□ -0.03
VARS-228ENST00000495010 HESX1Q9UBX0 185 aa14.86□□□□□ -0.03
VARS-228ENST00000495010 SFMBT1Q9UHJ3 866 aa14.86□□□□□ -0.03
VARS-228ENST00000495010 CFAP45Q9UL16 551 aa14.86□□□□□ -0.03
VARS-228ENST00000495010 SCML1Q9UN30 329 aa14.86□□□□□ -0.03
VARS-228ENST00000495010 NBEAQ8NFP9 2946 aa14.86□□□□□ -0.03
VARS-228ENST00000495010 URB1O60287 2271 aaKnown RBP14.86□□□□□ -0.03
VARS-228ENST00000495010 TMEM131Q92545 1883 aa14.85□□□□□ -0.03
VARS-228ENST00000495010 APC2O95996 2303 aa14.85□□□□□ -0.03
VARS-228ENST00000495010 ENC1O14682 589 aa14.85□□□□□ -0.03
VARS-228ENST00000495010 LDOC1O95751 146 aaPredicted RBP14.85□□□□□ -0.03
VARS-228ENST00000495010 LATS1O95835 1130 aa14.85□□□□□ -0.03
VARS-228ENST00000495010 MYL1P05976 194 aa14.85□□□□□ -0.03
VARS-228ENST00000495010 ITGAVP06756 1048 aa14.85□□□□□ -0.03
VARS-228ENST00000495010 CDK4P11802 303 aa14.85□□□□□ -0.03
VARS-228ENST00000495010 RAD23BP54727 409 aa14.85□□□□□ -0.03
VARS-228ENST00000495010 GOLGA7BQ2TAP0 167 aa14.85□□□□□ -0.03
VARS-228ENST00000495010 ARHGAP17Q68EM7 881 aa14.85□□□□□ -0.03
VARS-228ENST00000495010 PM20D1Q6GTS8 502 aa14.85□□□□□ -0.03
VARS-228ENST00000495010 ADIPOR2Q86V24 386 aa14.85□□□□□ -0.03
VARS-228ENST00000495010 SIX6OS1Q8N1H7 587 aa14.85□□□□□ -0.03
VARS-228ENST00000495010 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.85□□□□□ -0.03
VARS-228ENST00000495010 ZNF557Q8N988 423 aaPredicted RBP14.85□□□□□ -0.03
VARS-228ENST00000495010 SLC4A11Q8NBS3 891 aa14.85□□□□□ -0.03
VARS-228ENST00000495010 NDRG1Q92597 394 aaKnown RBP14.85□□□□□ -0.03
VARS-228ENST00000495010 EDEM1Q92611 657 aa14.85□□□□□ -0.03
VARS-228ENST00000495010 CRELD1Q96HD1 420 aa14.85□□□□□ -0.03
VARS-228ENST00000495010 FAXDC2Q96IV6 333 aa14.85□□□□□ -0.03
VARS-228ENST00000495010 FBXL12Q9NXK8 326 aa14.85□□□□□ -0.03
VARS-228ENST00000495010 PCDHGA1Q9Y5H4 931 aa14.85□□□□□ -0.03
VARS-228ENST00000495010 AK5Q9Y6K8 562 aa14.85□□□□□ -0.03
VARS-228ENST00000495010 A0A1B0GTQ1 180 aa14.84□□□□□ -0.03
VARS-228ENST00000495010 XPO1O14980 1071 aaKnown RBP14.84□□□□□ -0.03
VARS-228ENST00000495010 VILLO15195 856 aa14.84□□□□□ -0.03
VARS-228ENST00000495010 PAPSS1O43252 624 aaPredicted RBP14.84□□□□□ -0.03
VARS-228ENST00000495010 ACTN4O43707 911 aaKnown RBP14.84□□□□□ -0.03
VARS-228ENST00000495010 STX10O60499 249 aa14.84□□□□□ -0.03
VARS-228ENST00000495010 TBL1XO60907 577 aa14.84□□□□□ -0.03
VARS-228ENST00000495010 GTF2H1P32780 548 aa14.84□□□□□ -0.03
VARS-228ENST00000495010 ENPEPQ07075 957 aa14.84□□□□□ -0.03
VARS-228ENST00000495010 ADAM9Q13443 819 aa14.84□□□□□ -0.03
VARS-228ENST00000495010 KCNT1Q5JUK3 1230 aa14.84□□□□□ -0.03
VARS-228ENST00000495010 BSPRYQ5W0U4 402 aa14.84□□□□□ -0.03
VARS-228ENST00000495010 ATL3Q6DD88 541 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms