RNA–Protein interactions for RNA: ENST00000492650.1

VPS36-205, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 5

Gene VPS36, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-205ENST00000492650 PPM1FP49593 454 aaPredicted RBP3.82□□□□□ -1.8
VPS36-205ENST00000492650 POU5F1Q01860 360 aaKnown RBP3.82□□□□□ -1.8
VPS36-205ENST00000492650 MTAPQ13126 283 aa3.82□□□□□ -1.8
VPS36-205ENST00000492650 BFSP2Q13515 415 aa3.82□□□□□ -1.8
VPS36-205ENST00000492650 MYBPC2Q14324 1141 aa3.82□□□□□ -1.8
VPS36-205ENST00000492650 KCTD2Q14681 263 aa3.82□□□□□ -1.8
VPS36-205ENST00000492650 ACOX1Q15067 660 aa3.82□□□□□ -1.8
VPS36-205ENST00000492650 AASDHQ4L235 1098 aaPredicted RBP3.82□□□□□ -1.8
VPS36-205ENST00000492650 TOGARAM2Q6ZUX3 1019 aa3.82□□□□□ -1.8
VPS36-205ENST00000492650 TMEM199Q8N511 208 aa3.82□□□□□ -1.8
VPS36-205ENST00000492650 SLC44A5Q8NCS7 719 aa3.82□□□□□ -1.8
VPS36-205ENST00000492650 C1orf131Q8NDD1 294 aaKnown RBP3.82□□□□□ -1.8
VPS36-205ENST00000492650 ABHD5Q8WTS1 349 aa3.82□□□□□ -1.8
VPS36-205ENST00000492650 TIFAQ96CG3 184 aa3.82□□□□□ -1.8
VPS36-205ENST00000492650 MSLNLQ96KJ4 702 aa3.82□□□□□ -1.8
VPS36-205ENST00000492650 ELAC2Q9BQ52 826 aaKnown RBP3.82□□□□□ -1.8
VPS36-205ENST00000492650 ZPBPQ9BS86 351 aa3.82□□□□□ -1.8
VPS36-205ENST00000492650 MOV10Q9HCE1 1003 aaKnown RBP3.82□□□□□ -1.8
VPS36-205ENST00000492650 HEYLQ9NQ87 328 aaPredicted RBP3.82□□□□□ -1.8
VPS36-205ENST00000492650 ABHD10Q9NUJ1 306 aa3.82□□□□□ -1.8
VPS36-205ENST00000492650 ASNSD1Q9NWL6 643 aa3.82□□□□□ -1.8
VPS36-205ENST00000492650 GTF2A1LQ9UNN4 478 aa3.82□□□□□ -1.8
VPS36-205ENST00000492650 PCDHGB6Q9Y5F9 930 aa3.82□□□□□ -1.8
VPS36-205ENST00000492650 TMEM272A0A1B0GTI8 110 aa3.81□□□□□ -1.8
VPS36-205ENST00000492650 F8W8V4 182 aa3.81□□□□□ -1.8
VPS36-205ENST00000492650 CTIFO43310 598 aaKnown RBP3.81□□□□□ -1.8
VPS36-205ENST00000492650 CCNT2O60583 730 aaKnown RBP3.81□□□□□ -1.8
VPS36-205ENST00000492650 HRGP04196 525 aa3.81□□□□□ -1.8
VPS36-205ENST00000492650 ANXA2P07355 339 aaKnown RBP3.81□□□□□ -1.8
VPS36-205ENST00000492650 DRD1P21728 446 aa3.81□□□□□ -1.8
VPS36-205ENST00000492650 MCCP23508 829 aa3.81□□□□□ -1.8
VPS36-205ENST00000492650 DUSP1P28562 367 aa3.81□□□□□ -1.8
VPS36-205ENST00000492650 SERPINB3P29508 390 aa3.81□□□□□ -1.8
VPS36-205ENST00000492650 IDUAP35475 653 aa3.81□□□□□ -1.8
VPS36-205ENST00000492650 HALP42357 657 aa3.81□□□□□ -1.8
VPS36-205ENST00000492650 PPATQ06203 517 aa3.81□□□□□ -1.8
VPS36-205ENST00000492650 GPS1Q13098 491 aa3.81□□□□□ -1.8
VPS36-205ENST00000492650 FHL3Q13643 280 aa3.81□□□□□ -1.8
VPS36-205ENST00000492650 KCNJ12Q14500 433 aa3.81□□□□□ -1.8
VPS36-205ENST00000492650 GRM3Q14832 879 aa3.81□□□□□ -1.8
VPS36-205ENST00000492650 KRT72Q14CN4 511 aa3.81□□□□□ -1.8
VPS36-205ENST00000492650 UBAP2Q5T6F2 1119 aaKnown RBP3.81□□□□□ -1.8
VPS36-205ENST00000492650 FAM43BQ6ZT52 329 aaPredicted RBP3.81□□□□□ -1.8
VPS36-205ENST00000492650 CHST15Q7LFX5 561 aaPredicted RBP3.81□□□□□ -1.8
VPS36-205ENST00000492650 SKAP1Q86WV1 359 aa3.81□□□□□ -1.8
VPS36-205ENST00000492650 CNPY4Q8N129 248 aa3.81□□□□□ -1.8
VPS36-205ENST00000492650 AKAP1Q92667 903 aaKnown RBP eCLIP3.81□□□□□ -1.8
VPS36-205ENST00000492650 CELF1Q92879 486 aaKnown RBP3.81□□□□□ -1.8
VPS36-205ENST00000492650 MRPL44Q9H9J2 332 aaKnown RBP3.81□□□□□ -1.8
VPS36-205ENST00000492650 TMEM8AQ9HCN3 771 aa3.81□□□□□ -1.8
VPS36-205ENST00000492650 PAPOLBQ9NRJ5 636 aaKnown RBP3.81□□□□□ -1.8
VPS36-205ENST00000492650 TMOD4Q9NZQ9 345 aa3.81□□□□□ -1.8
VPS36-205ENST00000492650 MSRB1Q9NZV6 116 aa3.81□□□□□ -1.8
VPS36-205ENST00000492650 IPO11Q9UI26 975 aaKnown RBP3.81□□□□□ -1.8
VPS36-205ENST00000492650 PROCRQ9UNN8 238 aa3.81□□□□□ -1.8
VPS36-205ENST00000492650 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.8□□□□□ -1.8
VPS36-205ENST00000492650 A0A1W2PPC1 479 aa3.8□□□□□ -1.8
VPS36-205ENST00000492650 LACTBL1A8MY62 500 aa3.8□□□□□ -1.8
VPS36-205ENST00000492650 ZNF814B7Z6K7 855 aa3.8□□□□□ -1.8
VPS36-205ENST00000492650 FOXN3O00409 490 aaPredicted RBP3.8□□□□□ -1.8
VPS36-205ENST00000492650 PRYO14603 147 aa3.8□□□□□ -1.8
VPS36-205ENST00000492650 APAF1O14727 1248 aa3.8□□□□□ -1.8
VPS36-205ENST00000492650 PRPF4O43172 522 aaKnown RBP eCLIP3.8□□□□□ -1.8
VPS36-205ENST00000492650 THAP12O43422 761 aa3.8□□□□□ -1.8
VPS36-205ENST00000492650 EPB41L2O43491 1005 aaKnown RBP3.8□□□□□ -1.8
VPS36-205ENST00000492650 RPL17P18621 184 aaKnown RBP3.8□□□□□ -1.8
VPS36-205ENST00000492650 TFEBP19484 476 aa3.8□□□□□ -1.8
VPS36-205ENST00000492650 HOXD12P35452 270 aa3.8□□□□□ -1.8
VPS36-205ENST00000492650 GBX1Q14549 363 aa3.8□□□□□ -1.8
VPS36-205ENST00000492650 SAFBQ15424 915 aaKnown RBP eCLIP3.8□□□□□ -1.8
VPS36-205ENST00000492650 ZNF585BQ52M93 769 aa3.8□□□□□ -1.8
VPS36-205ENST00000492650 COBLL1Q53SF7 1204 aa3.8□□□□□ -1.8
VPS36-205ENST00000492650 RFX8Q6ZV50 586 aa3.8□□□□□ -1.8
VPS36-205ENST00000492650 ZNF354CQ86Y25 554 aa3.8□□□□□ -1.8
VPS36-205ENST00000492650 ASB5Q8WWX0 329 aa3.8□□□□□ -1.8
VPS36-205ENST00000492650 KAT2BQ92831 832 aa3.8□□□□□ -1.8
VPS36-205ENST00000492650 GJA10Q969M2 543 aa3.8□□□□□ -1.8
VPS36-205ENST00000492650 IQCDQ96DY2 449 aa3.8□□□□□ -1.8
VPS36-205ENST00000492650 P2RY11Q96G91 374 aa3.8□□□□□ -1.8
VPS36-205ENST00000492650 TTLL2Q9BWV7 592 aa3.8□□□□□ -1.8
VPS36-205ENST00000492650 APOL5Q9BWW9 433 aa3.8□□□□□ -1.8
VPS36-205ENST00000492650 RNF26Q9BY78 433 aaPredicted RBP3.8□□□□□ -1.8
VPS36-205ENST00000492650 PLCB1Q9NQ66 1216 aa3.8□□□□□ -1.8
VPS36-205ENST00000492650 TRIP12Q14669 1992 aaPredicted RBP3.8□□□□□ -1.8
VPS36-205ENST00000492650 TRBV5-3A0A0A0MS03 114 aa3.79□□□□□ -1.8
VPS36-205ENST00000492650 GTPBP1O00178 669 aaKnown RBP3.79□□□□□ -1.8
VPS36-205ENST00000492650 TLX3O43711 291 aaPredicted RBP3.79□□□□□ -1.8
VPS36-205ENST00000492650 PIP5K1CO60331 668 aa3.79□□□□□ -1.8
VPS36-205ENST00000492650 COQ9O75208 318 aa3.79□□□□□ -1.8
VPS36-205ENST00000492650 EPN2O95208 641 aa3.79□□□□□ -1.8
VPS36-205ENST00000492650 FGF2P09038 288 aa3.79□□□□□ -1.8
VPS36-205ENST00000492650 TGFB3P10600 412 aa3.79□□□□□ -1.8
VPS36-205ENST00000492650 IGHMBP2P38935 993 aaKnown RBP3.79□□□□□ -1.8
VPS36-205ENST00000492650 SEMA3BQ13214 749 aa3.79□□□□□ -1.8
VPS36-205ENST00000492650 GAB1Q13480 694 aa3.79□□□□□ -1.8
VPS36-205ENST00000492650 ELF2Q15723 593 aa3.79□□□□□ -1.8
VPS36-205ENST00000492650 INPP5JQ15735 1006 aaPredicted RBP3.79□□□□□ -1.8
VPS36-205ENST00000492650 SLC4A8Q2Y0W8 1093 aa3.79□□□□□ -1.8
VPS36-205ENST00000492650 ABLIM2Q6H8Q1 611 aa3.79□□□□□ -1.8
VPS36-205ENST00000492650 CRTC1Q6UUV9 634 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms