RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 KCNT1Q5JUK3 1230 aa8.01□□□□□ -1.13
PDPN-205ENST00000487038 SFMBT2Q5VUG0 894 aa8.01□□□□□ -1.13
PDPN-205ENST00000487038 RRAGBQ5VZM2 374 aa8.01□□□□□ -1.13
PDPN-205ENST00000487038 SCARA5Q6ZMJ2 495 aa8.01□□□□□ -1.13
PDPN-205ENST00000487038 ACOT1Q86TX2 421 aa8.01□□□□□ -1.13
PDPN-205ENST00000487038 ZNF276Q8N554 614 aa8.01□□□□□ -1.13
PDPN-205ENST00000487038 ZNF557Q8N988 423 aaPredicted RBP8.01□□□□□ -1.13
PDPN-205ENST00000487038 RDH13Q8NBN7 331 aa8.01□□□□□ -1.13
PDPN-205ENST00000487038 RBBP8NLQ8NC74 664 aaPredicted RBP8.01□□□□□ -1.13
PDPN-205ENST00000487038 ZMIZ2Q8NF64 920 aa8.01□□□□□ -1.13
PDPN-205ENST00000487038 SORCS1Q8WY21 1168 aa8.01□□□□□ -1.13
PDPN-205ENST00000487038 TTC9Q92623 222 aa8.01□□□□□ -1.13
PDPN-205ENST00000487038 JAKMIP2Q96AA8 810 aa8.01□□□□□ -1.13
PDPN-205ENST00000487038 CCDC127Q96BQ5 260 aa8.01□□□□□ -1.13
PDPN-205ENST00000487038 CCDC97Q96F63 343 aaPredicted RBP8.01□□□□□ -1.13
PDPN-205ENST00000487038 DEPDC7Q96QD5 511 aa8.01□□□□□ -1.13
PDPN-205ENST00000487038 HNRNPABQ99729 332 aaKnown RBP8.01□□□□□ -1.13
PDPN-205ENST00000487038 SEMA4CQ9C0C4 833 aa8.01□□□□□ -1.13
PDPN-205ENST00000487038 TMEM245Q9H330 911 aa8.01□□□□□ -1.13
PDPN-205ENST00000487038 SMYD3Q9H7B4 428 aa8.01□□□□□ -1.13
PDPN-205ENST00000487038 ERVMER34-1Q9H9K5 563 aa8.01□□□□□ -1.13
PDPN-205ENST00000487038 THSD1Q9NS62 852 aa8.01□□□□□ -1.13
PDPN-205ENST00000487038 OSER1Q9NX31 292 aa8.01□□□□□ -1.13
PDPN-205ENST00000487038 CLIC5Q9NZA1 410 aa8.01□□□□□ -1.13
PDPN-205ENST00000487038 SUN2Q9UH99 717 aa8.01□□□□□ -1.13
PDPN-205ENST00000487038 NUDT5Q9UKK9 219 aa8.01□□□□□ -1.13
PDPN-205ENST00000487038 STRIP2Q9ULQ0 834 aa8.01□□□□□ -1.13
PDPN-205ENST00000487038 UBE4BO95155 1302 aa8.01□□□□□ -1.13
PDPN-205ENST00000487038 CENPEQ02224 2701 aa8□□□□□ -1.13
PDPN-205ENST00000487038 BEST1O76090 585 aa8□□□□□ -1.13
PDPN-205ENST00000487038 DXOO77932 396 aaKnown RBP8□□□□□ -1.13
PDPN-205ENST00000487038 MT-CO3P00414 261 aa8□□□□□ -1.13
PDPN-205ENST00000487038 HMBSP08397 361 aa8□□□□□ -1.13
PDPN-205ENST00000487038 ADORA2BP29275 332 aa8□□□□□ -1.13
PDPN-205ENST00000487038 STAT6P42226 847 aa8□□□□□ -1.13
PDPN-205ENST00000487038 PGFP49763 221 aa8□□□□□ -1.13
PDPN-205ENST00000487038 ST8SIA6P61647 398 aa8□□□□□ -1.13
PDPN-205ENST00000487038 SNRPFP62306 86 aaKnown RBP8□□□□□ -1.13
PDPN-205ENST00000487038 ASIC1P78348 528 aa8□□□□□ -1.13
PDPN-205ENST00000487038 CYP24A1Q07973 514 aa8□□□□□ -1.13
PDPN-205ENST00000487038 EFEMP1Q12805 493 aa8□□□□□ -1.13
PDPN-205ENST00000487038 BMT2Q1RMZ1 405 aa8□□□□□ -1.13
PDPN-205ENST00000487038 CCDC73Q6ZRK6 1079 aa8□□□□□ -1.13
PDPN-205ENST00000487038 CLEC20AQ6ZU45 233 aa8□□□□□ -1.13
PDPN-205ENST00000487038 CHST9Q7L1S5 443 aa8□□□□□ -1.13
PDPN-205ENST00000487038 RSRC2Q7L4I2 434 aaKnown RBP8□□□□□ -1.13
PDPN-205ENST00000487038 GPRIN1Q7Z2K8 1008 aa8□□□□□ -1.13
PDPN-205ENST00000487038 CCDC186Q7Z3E2 898 aa8□□□□□ -1.13
PDPN-205ENST00000487038 BRAPQ7Z569 592 aa8□□□□□ -1.13
PDPN-205ENST00000487038 UNC93AQ86WB7 457 aa8□□□□□ -1.13
PDPN-205ENST00000487038 DENND1CQ8IV53 801 aa8□□□□□ -1.13
PDPN-205ENST00000487038 ARHGAP18Q8N392 663 aa8□□□□□ -1.13
PDPN-205ENST00000487038 ZNF366Q8N895 744 aa8□□□□□ -1.13
PDPN-205ENST00000487038 XXYLT1Q8NBI6 393 aa8□□□□□ -1.13
PDPN-205ENST00000487038 OR2T34Q8NGX1 318 aa8□□□□□ -1.13
PDPN-205ENST00000487038 CYB5D2Q8WUJ1 264 aa8□□□□□ -1.13
PDPN-205ENST00000487038 SNRNP27Q8WVK2 155 aaKnown RBP8□□□□□ -1.13
PDPN-205ENST00000487038 PLD4Q96BZ4 506 aa8□□□□□ -1.13
PDPN-205ENST00000487038 EPSTI1Q96J88 318 aa8□□□□□ -1.13
PDPN-205ENST00000487038 HIC2Q96JB3 615 aa8□□□□□ -1.13
PDPN-205ENST00000487038 ORAI3Q9BRQ5 295 aa8□□□□□ -1.13
PDPN-205ENST00000487038 LRRC27Q9C0I9 530 aa8□□□□□ -1.13
PDPN-205ENST00000487038 XYLT2Q9H1B5 865 aa8□□□□□ -1.13
PDPN-205ENST00000487038 PABPC3Q9H361 631 aaKnown RBP8□□□□□ -1.13
PDPN-205ENST00000487038 NMUR1Q9HB89 426 aa8□□□□□ -1.13
PDPN-205ENST00000487038 PRSS16Q9NQE7 514 aa8□□□□□ -1.13
PDPN-205ENST00000487038 FAM49BQ9NUQ9 324 aa8□□□□□ -1.13
PDPN-205ENST00000487038 EVA1BQ9NVM1 165 aa8□□□□□ -1.13
PDPN-205ENST00000487038 FBXL12Q9NXK8 326 aa8□□□□□ -1.13
PDPN-205ENST00000487038 AGO1Q9UL18 857 aaKnown RBP8□□□□□ -1.13
PDPN-205ENST00000487038 FZD4Q9ULV1 537 aa8□□□□□ -1.13
PDPN-205ENST00000487038 ARID1BQ8NFD5 2236 aaPredicted RBP8□□□□□ -1.13
PDPN-205ENST00000487038 TLR4O00206 839 aa7.99□□□□□ -1.13
PDPN-205ENST00000487038 KLKB1P03952 638 aa7.99□□□□□ -1.13
PDPN-205ENST00000487038 WNT1P04628 370 aa7.99□□□□□ -1.13
PDPN-205ENST00000487038 MPOP05164 745 aa7.99□□□□□ -1.13
PDPN-205ENST00000487038 DLDP09622 509 aaKnown RBP7.99□□□□□ -1.13
PDPN-205ENST00000487038 PABPC1P11940 636 aaKnown RBP7.99□□□□□ -1.13
PDPN-205ENST00000487038 POLR2EP19388 210 aaKnown RBP7.99□□□□□ -1.13
PDPN-205ENST00000487038 HOXD9P28356 352 aaPredicted RBP7.99□□□□□ -1.13
PDPN-205ENST00000487038 HLA-FP30511 346 aa7.99□□□□□ -1.13
PDPN-205ENST00000487038 RXRGP48443 463 aa7.99□□□□□ -1.13
PDPN-205ENST00000487038 HARS2P49590 506 aaKnown RBP7.99□□□□□ -1.13
PDPN-205ENST00000487038 CYP2J2P51589 502 aa7.99□□□□□ -1.13
PDPN-205ENST00000487038 NDST1P52848 882 aa7.99□□□□□ -1.13
PDPN-205ENST00000487038 GALCP54803 685 aa7.99□□□□□ -1.13
PDPN-205ENST00000487038 NXPH1P58417 271 aa7.99□□□□□ -1.13
PDPN-205ENST00000487038 SRSF1Q07955 248 aaKnown RBP eCLIP7.99□□□□□ -1.13
PDPN-205ENST00000487038 NCOA4Q13772 614 aa7.99□□□□□ -1.13
PDPN-205ENST00000487038 SHBQ15464 509 aa7.99□□□□□ -1.13
PDPN-205ENST00000487038 SGO2Q562F6 1265 aa7.99□□□□□ -1.13
PDPN-205ENST00000487038 PRAMEF14Q5SWL7 426 aa7.99□□□□□ -1.13
PDPN-205ENST00000487038 TMEM215Q68D42 235 aa7.99□□□□□ -1.13
PDPN-205ENST00000487038 NCEH1Q6PIU2 408 aa7.99□□□□□ -1.13
PDPN-205ENST00000487038 FAM217AQ8IXS0 508 aa7.99□□□□□ -1.13
PDPN-205ENST00000487038 SERAC1Q96JX3 654 aa7.99□□□□□ -1.13
PDPN-205ENST00000487038 OMDQ99983 421 aa7.99□□□□□ -1.13
PDPN-205ENST00000487038 FGFBP2Q9BYJ0 223 aa7.99□□□□□ -1.13
PDPN-205ENST00000487038 RSPH9Q9H1X1 276 aaPredicted RBP7.99□□□□□ -1.13
PDPN-205ENST00000487038 IL17BQ9UHF5 180 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms