RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 PTPN20Q4JDL3 420 aa8.6□□□□□ -1.03
HDAC6-221ENST00000477561 USP39Q53GS9 565 aaKnown RBP8.6□□□□□ -1.03
HDAC6-221ENST00000477561 C2CD6Q53TS8 623 aa8.6□□□□□ -1.03
HDAC6-221ENST00000477561 DCAF6Q58WW2 860 aa8.6□□□□□ -1.03
HDAC6-221ENST00000477561 FAM133BQ5BKY9 247 aaKnown RBP8.6□□□□□ -1.03
HDAC6-221ENST00000477561 ZC3H12AQ5D1E8 599 aaKnown RBP8.6□□□□□ -1.03
HDAC6-221ENST00000477561 NUGGCQ68CJ6 796 aa8.6□□□□□ -1.03
HDAC6-221ENST00000477561 NADSYN1Q6IA69 706 aa8.6□□□□□ -1.03
HDAC6-221ENST00000477561 SDE2Q6IQ49 451 aa8.6□□□□□ -1.03
HDAC6-221ENST00000477561 CACNA2D4Q7Z3S7 1137 aa8.6□□□□□ -1.03
HDAC6-221ENST00000477561 TRMT11Q7Z4G4 463 aaKnown RBP8.6□□□□□ -1.03
HDAC6-221ENST00000477561 NOP9Q86U38 636 aaKnown RBP8.6□□□□□ -1.03
HDAC6-221ENST00000477561 RASSF3Q86WH2 238 aa8.6□□□□□ -1.03
HDAC6-221ENST00000477561 FAM217AQ8IXS0 508 aa8.6□□□□□ -1.03
HDAC6-221ENST00000477561 DEFB106AQ8N104 65 aa8.6□□□□□ -1.03
HDAC6-221ENST00000477561 FRMD1Q8N878 549 aa8.6□□□□□ -1.03
HDAC6-221ENST00000477561 RLN3Q8WXF3 142 aa8.6□□□□□ -1.03
HDAC6-221ENST00000477561 SORCS1Q8WY21 1168 aa8.6□□□□□ -1.03
HDAC6-221ENST00000477561 IQCDQ96DY2 449 aa8.6□□□□□ -1.03
HDAC6-221ENST00000477561 MYEOVQ96EZ4 313 aa8.6□□□□□ -1.03
HDAC6-221ENST00000477561 FCRL2Q96LA5 508 aaPredicted RBP8.6□□□□□ -1.03
HDAC6-221ENST00000477561 SERPINB11Q96P15 392 aa8.6□□□□□ -1.03
HDAC6-221ENST00000477561 NOX5Q96PH1 765 aa8.6□□□□□ -1.03
HDAC6-221ENST00000477561 CIPCQ9C0C6 399 aa8.6□□□□□ -1.03
HDAC6-221ENST00000477561 GANQ9H2C0 597 aa8.6□□□□□ -1.03
HDAC6-221ENST00000477561 ARRDC1-AS1Q9H2J1 176 aa8.6□□□□□ -1.03
HDAC6-221ENST00000477561 POPDC2Q9HBU9 364 aa8.6□□□□□ -1.03
HDAC6-221ENST00000477561 STIM2Q9P246 746 aa8.6□□□□□ -1.03
HDAC6-221ENST00000477561 EBF1Q9UH73 591 aa8.6□□□□□ -1.03
HDAC6-221ENST00000477561 XPO7Q9UIA9 1087 aaKnown RBP8.6□□□□□ -1.03
HDAC6-221ENST00000477561 STOML2Q9UJZ1 356 aa8.6□□□□□ -1.03
HDAC6-221ENST00000477561 TLR6Q9Y2C9 796 aa8.6□□□□□ -1.03
HDAC6-221ENST00000477561 CEP83Q9Y592 693 aa8.6□□□□□ -1.03
HDAC6-221ENST00000477561 PTPRZ1P23471 2315 aaPredicted RBP8.6□□□□□ -1.03
HDAC6-221ENST00000477561 EP300Q09472 2414 aaPredicted RBP8.6□□□□□ -1.03
HDAC6-221ENST00000477561 ZNF292O60281 2723 aa8.6□□□□□ -1.03
HDAC6-221ENST00000477561 A0A1W2PQF6 199 aa8.59□□□□□ -1.03
HDAC6-221ENST00000477561 GFRA2O00451 464 aa8.59□□□□□ -1.03
HDAC6-221ENST00000477561 LATS1O95835 1130 aa8.59□□□□□ -1.03
HDAC6-221ENST00000477561 RETP07949 1114 aa8.59□□□□□ -1.03
HDAC6-221ENST00000477561 MMEP08473 750 aa8.59□□□□□ -1.03
HDAC6-221ENST00000477561 BCKDHBP21953 392 aa8.59□□□□□ -1.03
HDAC6-221ENST00000477561 TGM1P22735 817 aa8.59□□□□□ -1.03
HDAC6-221ENST00000477561 HLA-FP30511 346 aa8.59□□□□□ -1.03
HDAC6-221ENST00000477561 RNASE9P60153 205 aaKnown RBP8.59□□□□□ -1.03
HDAC6-221ENST00000477561 CDK17Q00537 523 aa8.59□□□□□ -1.03
HDAC6-221ENST00000477561 SLC6A3Q01959 620 aa8.59□□□□□ -1.03
HDAC6-221ENST00000477561 RING1Q06587 406 aa8.59□□□□□ -1.03
HDAC6-221ENST00000477561 PLK5Q496M5 336 aa8.59□□□□□ -1.03
HDAC6-221ENST00000477561 EFHC1Q5JVL4 640 aa8.59□□□□□ -1.03
HDAC6-221ENST00000477561 PIK3R6Q5UE93 754 aa8.59□□□□□ -1.03
HDAC6-221ENST00000477561 RAP1GAP2Q684P5 730 aa8.59□□□□□ -1.03
HDAC6-221ENST00000477561 TMEM215Q68D42 235 aa8.59□□□□□ -1.03
HDAC6-221ENST00000477561 KIAA1211LQ6NV74 962 aa8.59□□□□□ -1.03
HDAC6-221ENST00000477561 ANKS1BQ7Z6G8 1248 aa8.59□□□□□ -1.03
HDAC6-221ENST00000477561 PHLDB2Q86SQ0 1253 aa8.59□□□□□ -1.03
HDAC6-221ENST00000477561 CFAP52Q8N1V2 620 aa8.59□□□□□ -1.03
HDAC6-221ENST00000477561 TMEM35BQ8NCS4 154 aa8.59□□□□□ -1.03
HDAC6-221ENST00000477561 NEK11Q8NG66 645 aa8.59□□□□□ -1.03
HDAC6-221ENST00000477561 WFDC5Q8TCV5 224 aa8.59□□□□□ -1.03
HDAC6-221ENST00000477561 KCNV2Q8TDN2 545 aa8.59□□□□□ -1.03
HDAC6-221ENST00000477561 IPO4Q8TEX9 1081 aaKnown RBP8.59□□□□□ -1.03
HDAC6-221ENST00000477561 SLC20A1Q8WUM9 679 aa8.59□□□□□ -1.03
HDAC6-221ENST00000477561 CPA5Q8WXQ8 436 aa8.59□□□□□ -1.03
HDAC6-221ENST00000477561 DDX1Q92499 740 aaKnown RBP8.59□□□□□ -1.03
HDAC6-221ENST00000477561 RNF34Q969K3 372 aa8.59□□□□□ -1.03
HDAC6-221ENST00000477561 SLC39A13Q96H72 371 aa8.59□□□□□ -1.03
HDAC6-221ENST00000477561 NUP58Q9BVL2 599 aa8.59□□□□□ -1.03
HDAC6-221ENST00000477561 SLC2A11Q9BYW1 496 aa8.59□□□□□ -1.03
HDAC6-221ENST00000477561 NUCKS1Q9H1E3 243 aaKnown RBP8.59□□□□□ -1.03
HDAC6-221ENST00000477561 DUSP15Q9H1R2 295 aaPredicted RBP8.59□□□□□ -1.03
HDAC6-221ENST00000477561 SLC6A17Q9H1V8 727 aa8.59□□□□□ -1.03
HDAC6-221ENST00000477561 SMOC1Q9H4F8 434 aa8.59□□□□□ -1.03
HDAC6-221ENST00000477561 FAM204AQ9H8W3 233 aa8.59□□□□□ -1.03
HDAC6-221ENST00000477561 ABCB8Q9NUT2 735 aa8.59□□□□□ -1.03
HDAC6-221ENST00000477561 DDIT4Q9NX09 232 aa8.59□□□□□ -1.03
HDAC6-221ENST00000477561 ELOVL2Q9NXB9 296 aa8.59□□□□□ -1.03
HDAC6-221ENST00000477561 SIK3Q9Y2K2 1263 aa8.59□□□□□ -1.03
HDAC6-221ENST00000477561 SLC27A6Q9Y2P4 619 aa8.59□□□□□ -1.03
HDAC6-221ENST00000477561 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.59□□□□□ -1.03
HDAC6-221ENST00000477561 STON1Q9Y6Q2 735 aa8.59□□□□□ -1.03
HDAC6-221ENST00000477561 GOLGA8SH3BPF8 625 aa8.58□□□□□ -1.04
HDAC6-221ENST00000477561 IRAK2O43187 625 aa8.58□□□□□ -1.04
HDAC6-221ENST00000477561 TEX33O43247 280 aa8.58□□□□□ -1.04
HDAC6-221ENST00000477561 MAP3K13O43283 966 aa8.58□□□□□ -1.04
HDAC6-221ENST00000477561 HSF2BPO75031 334 aa8.58□□□□□ -1.04
HDAC6-221ENST00000477561 APOEP02649 317 aa8.58□□□□□ -1.04
HDAC6-221ENST00000477561 GLI1P08151 1106 aa8.58□□□□□ -1.04
HDAC6-221ENST00000477561 CHRNB2P17787 502 aa8.58□□□□□ -1.04
HDAC6-221ENST00000477561 GABRG2P18507 467 aa8.58□□□□□ -1.04
HDAC6-221ENST00000477561 CD70P32970 193 aa8.58□□□□□ -1.04
HDAC6-221ENST00000477561 SOX5P35711 763 aa8.58□□□□□ -1.04
HDAC6-221ENST00000477561 PBX1P40424 430 aa8.58□□□□□ -1.04
HDAC6-221ENST00000477561 IL12RB1P42701 662 aa8.58□□□□□ -1.04
HDAC6-221ENST00000477561 NUMBP49757 651 aa8.58□□□□□ -1.04
HDAC6-221ENST00000477561 JAM2P57087 298 aa8.58□□□□□ -1.04
HDAC6-221ENST00000477561 RPS24P62847 133 aaKnown RBP8.58□□□□□ -1.04
HDAC6-221ENST00000477561 ARID5AQ03989 594 aa8.58□□□□□ -1.04
HDAC6-221ENST00000477561 NME3Q13232 169 aa8.58□□□□□ -1.04
HDAC6-221ENST00000477561 ZNF234Q14588 700 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms