RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 FRMD1Q8N878 549 aa10.57□□□□□ -0.72
SF3A3-204ENST00000462258 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.57□□□□□ -0.72
SF3A3-204ENST00000462258 HJURPQ8NCD3 748 aaPredicted RBP10.57□□□□□ -0.72
SF3A3-204ENST00000462258 ENOX1Q8TC92 643 aaKnown RBP10.57□□□□□ -0.72
SF3A3-204ENST00000462258 WFIKKN2Q8TEU8 576 aa10.57□□□□□ -0.72
SF3A3-204ENST00000462258 AZIN2Q96A70 460 aa10.57□□□□□ -0.72
SF3A3-204ENST00000462258 TMA16Q96EY4 203 aaKnown RBP10.57□□□□□ -0.72
SF3A3-204ENST00000462258 SLC39A13Q96H72 371 aa10.57□□□□□ -0.72
SF3A3-204ENST00000462258 PPP1R13BQ96KQ4 1090 aa10.57□□□□□ -0.72
SF3A3-204ENST00000462258 DDX50Q9BQ39 737 aaKnown RBP10.57□□□□□ -0.72
SF3A3-204ENST00000462258 RTKNQ9BST9 563 aa10.57□□□□□ -0.72
SF3A3-204ENST00000462258 IRX2Q9BZI1 471 aaPredicted RBP10.57□□□□□ -0.72
SF3A3-204ENST00000462258 LHX5Q9H2C1 402 aa10.57□□□□□ -0.72
SF3A3-204ENST00000462258 FAM204AQ9H8W3 233 aa10.57□□□□□ -0.72
SF3A3-204ENST00000462258 ABCB8Q9NUT2 735 aa10.57□□□□□ -0.72
SF3A3-204ENST00000462258 ELOVL2Q9NXB9 296 aa10.57□□□□□ -0.72
SF3A3-204ENST00000462258 THAP10Q9P2Z0 257 aaPredicted RBP10.57□□□□□ -0.72
SF3A3-204ENST00000462258 MBD1Q9UIS9 605 aaPredicted RBP10.57□□□□□ -0.72
SF3A3-204ENST00000462258 GGA2Q9UJY4 613 aa10.57□□□□□ -0.72
SF3A3-204ENST00000462258 ATXN2Q99700 1313 aaKnown RBP10.57□□□□□ -0.72
SF3A3-204ENST00000462258 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.56□□□□□ -0.72
SF3A3-204ENST00000462258 IGHV1OR15-9A0A0B4J2B8 117 aa10.56□□□□□ -0.72
SF3A3-204ENST00000462258 WASH3PC4AMC7 463 aa10.56□□□□□ -0.72
SF3A3-204ENST00000462258 F8VZ95 297 aa10.56□□□□□ -0.72
SF3A3-204ENST00000462258 FOXN3O00409 490 aaPredicted RBP10.56□□□□□ -0.72
SF3A3-204ENST00000462258 MAP3K13O43283 966 aa10.56□□□□□ -0.72
SF3A3-204ENST00000462258 SYNCRIPO60506 623 aaKnown RBP10.56□□□□□ -0.72
SF3A3-204ENST00000462258 TBL1XO60907 577 aa10.56□□□□□ -0.72
SF3A3-204ENST00000462258 HSF2BPO75031 334 aa10.56□□□□□ -0.72
SF3A3-204ENST00000462258 DAB1O75553 588 aa10.56□□□□□ -0.72
SF3A3-204ENST00000462258 CAVIN2O95810 425 aa10.56□□□□□ -0.72
SF3A3-204ENST00000462258 TRUB2O95900 331 aaKnown RBP10.56□□□□□ -0.72
SF3A3-204ENST00000462258 IGLV3-25P01717 112 aa10.56□□□□□ -0.72
SF3A3-204ENST00000462258 ERBB2P04626 1255 aa10.56□□□□□ -0.72
SF3A3-204ENST00000462258 TPM2P07951 284 aa10.56□□□□□ -0.72
SF3A3-204ENST00000462258 GLI1P08151 1106 aa10.56□□□□□ -0.72
SF3A3-204ENST00000462258 PABPC1P11940 636 aaKnown RBP10.56□□□□□ -0.72
SF3A3-204ENST00000462258 UCHL3P15374 230 aa10.56□□□□□ -0.72
SF3A3-204ENST00000462258 PRKCHP24723 683 aa10.56□□□□□ -0.72
SF3A3-204ENST00000462258 CLCN1P35523 988 aa10.56□□□□□ -0.72
SF3A3-204ENST00000462258 KRT9P35527 623 aa10.56□□□□□ -0.72
SF3A3-204ENST00000462258 ATXN1P54253 815 aaKnown RBP10.56□□□□□ -0.72
SF3A3-204ENST00000462258 BPIFB4P59827 614 aa10.56□□□□□ -0.72
SF3A3-204ENST00000462258 YWHAZP63104 245 aaKnown RBP10.56□□□□□ -0.72
SF3A3-204ENST00000462258 PITX1P78337 314 aaPredicted RBP10.56□□□□□ -0.72
SF3A3-204ENST00000462258 RPL6Q02878 288 aaKnown RBP10.56□□□□□ -0.72
SF3A3-204ENST00000462258 ENPP2Q13822 863 aa10.56□□□□□ -0.72
SF3A3-204ENST00000462258 DRAP1Q14919 205 aaPredicted RBP10.56□□□□□ -0.72
SF3A3-204ENST00000462258 KRT31Q15323 416 aa10.56□□□□□ -0.72
SF3A3-204ENST00000462258 TAF5Q15542 800 aa10.56□□□□□ -0.72
SF3A3-204ENST00000462258 FUT11Q495W5 492 aa10.56□□□□□ -0.72
SF3A3-204ENST00000462258 PTPN20Q4JDL3 420 aa10.56□□□□□ -0.72
SF3A3-204ENST00000462258 MPP7Q5T2T1 576 aa10.56□□□□□ -0.72
SF3A3-204ENST00000462258 CCDC183Q5T5S1 534 aa10.56□□□□□ -0.72
SF3A3-204ENST00000462258 PIK3R6Q5UE93 754 aa10.56□□□□□ -0.72
SF3A3-204ENST00000462258 KLHDC7AQ5VTJ3 777 aa10.56□□□□□ -0.72
SF3A3-204ENST00000462258 LYSMD4Q5XG99 296 aa10.56□□□□□ -0.72
SF3A3-204ENST00000462258 TMEM215Q68D42 235 aa10.56□□□□□ -0.72
SF3A3-204ENST00000462258 RNF43Q68DV7 783 aa10.56□□□□□ -0.72
SF3A3-204ENST00000462258 SASS6Q6UVJ0 657 aa10.56□□□□□ -0.72
SF3A3-204ENST00000462258 KIAA1324Q6UXG2 1013 aaKnown RBP10.56□□□□□ -0.72
SF3A3-204ENST00000462258 SERPINA13PQ6UXR4 307 aa10.56□□□□□ -0.72
SF3A3-204ENST00000462258 CHST9Q7L1S5 443 aa10.56□□□□□ -0.72
SF3A3-204ENST00000462258 CHSY1Q86X52 802 aa10.56□□□□□ -0.72
SF3A3-204ENST00000462258 MFN1Q8IWA4 741 aa10.56□□□□□ -0.72
SF3A3-204ENST00000462258 TMEFF1Q8IYR6 380 aa10.56□□□□□ -0.72
SF3A3-204ENST00000462258 WDTC1Q8N5D0 677 aa10.56□□□□□ -0.72
SF3A3-204ENST00000462258 ZNF557Q8N988 423 aaPredicted RBP10.56□□□□□ -0.72
SF3A3-204ENST00000462258 WFDC5Q8TCV5 224 aa10.56□□□□□ -0.72
SF3A3-204ENST00000462258 SORCS1Q8WY21 1168 aa10.56□□□□□ -0.72
SF3A3-204ENST00000462258 MRGPRX1Q96LB2 322 aa10.56□□□□□ -0.72
SF3A3-204ENST00000462258 SLC2A13Q96QE2 648 aa10.56□□□□□ -0.72
SF3A3-204ENST00000462258 EDEM2Q9BV94 578 aa10.56□□□□□ -0.72
SF3A3-204ENST00000462258 NAA15Q9BXJ9 866 aaKnown RBP10.56□□□□□ -0.72
SF3A3-204ENST00000462258 NUCKS1Q9H1E3 243 aaKnown RBP10.56□□□□□ -0.72
SF3A3-204ENST00000462258 SLC6A17Q9H1V8 727 aa10.56□□□□□ -0.72
SF3A3-204ENST00000462258 PDCL3Q9H2J4 239 aa10.56□□□□□ -0.72
SF3A3-204ENST00000462258 SYNCQ9H7C4 482 aa10.56□□□□□ -0.72
SF3A3-204ENST00000462258 CD93Q9NPY3 652 aa10.56□□□□□ -0.72
SF3A3-204ENST00000462258 PLCB1Q9NQ66 1216 aa10.56□□□□□ -0.72
SF3A3-204ENST00000462258 RXFP3Q9NSD7 469 aa10.56□□□□□ -0.72
SF3A3-204ENST00000462258 ANO10Q9NW15 660 aa10.56□□□□□ -0.72
SF3A3-204ENST00000462258 ASNSD1Q9NWL6 643 aa10.56□□□□□ -0.72
SF3A3-204ENST00000462258 CYP8B1Q9UNU6 501 aa10.56□□□□□ -0.72
SF3A3-204ENST00000462258 AP5Z1O43299 807 aa10.55□□□□□ -0.72
SF3A3-204ENST00000462258 ZNF217O75362 1048 aa10.55□□□□□ -0.72
SF3A3-204ENST00000462258 GRAP2O75791 330 aa10.55□□□□□ -0.72
SF3A3-204ENST00000462258 EPHX1P07099 455 aa10.55□□□□□ -0.72
SF3A3-204ENST00000462258 CYP11B1P15538 503 aa10.55□□□□□ -0.72
SF3A3-204ENST00000462258 CD70P32970 193 aa10.55□□□□□ -0.72
SF3A3-204ENST00000462258 PTGER3P43115 390 aa10.55□□□□□ -0.72
SF3A3-204ENST00000462258 LIMK1P53667 647 aa10.55□□□□□ -0.72
SF3A3-204ENST00000462258 SNX16P57768 344 aa10.55□□□□□ -0.72
SF3A3-204ENST00000462258 MYL5Q02045 173 aa10.55□□□□□ -0.72
SF3A3-204ENST00000462258 CDH18Q13634 790 aa10.55□□□□□ -0.72
SF3A3-204ENST00000462258 FNDC3BQ53EP0 1204 aaKnown RBP10.55□□□□□ -0.72
SF3A3-204ENST00000462258 DCAF6Q58WW2 860 aa10.55□□□□□ -0.72
SF3A3-204ENST00000462258 ZC3H12AQ5D1E8 599 aaKnown RBP10.55□□□□□ -0.72
SF3A3-204ENST00000462258 MS4A13Q5J8X5 152 aa10.55□□□□□ -0.72
SF3A3-204ENST00000462258 EFHC1Q5JVL4 640 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms