RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 OR5F1O95221 314 aa11.03□□□□□ -0.64
LINC00342-202ENST00000448494 PROCP04070 461 aa11.03□□□□□ -0.64
LINC00342-202ENST00000448494 POLR2GP62487 172 aaKnown RBP eCLIP11.03□□□□□ -0.64
LINC00342-202ENST00000448494 POU6F2P78424 691 aaPredicted RBP11.03□□□□□ -0.64
LINC00342-202ENST00000448494 TMPRSS15P98073 1019 aa11.03□□□□□ -0.64
LINC00342-202ENST00000448494 PMS2P3Q13401 168 aa11.03□□□□□ -0.64
LINC00342-202ENST00000448494 MTMR2Q13614 643 aa11.03□□□□□ -0.64
LINC00342-202ENST00000448494 IQSEC1Q6DN90 963 aa11.03□□□□□ -0.64
LINC00342-202ENST00000448494 DPY19L2P1Q6NXN4 242 aa11.03□□□□□ -0.64
LINC00342-202ENST00000448494 POTEBQ6S5H4 581 aa11.03□□□□□ -0.64
LINC00342-202ENST00000448494 CYP20A1Q6UW02 462 aa11.03□□□□□ -0.64
LINC00342-202ENST00000448494 KIAA0408Q6ZU52 694 aa11.03□□□□□ -0.64
LINC00342-202ENST00000448494 TOM1L2Q6ZVM7 507 aa11.03□□□□□ -0.64
LINC00342-202ENST00000448494 SH3BP5LQ7L8J4 393 aa11.03□□□□□ -0.64
LINC00342-202ENST00000448494 DGKHQ86XP1 1220 aa11.03□□□□□ -0.64
LINC00342-202ENST00000448494 CMTR1Q8N1G2 835 aaKnown RBP11.03□□□□□ -0.64
LINC00342-202ENST00000448494 SNX31Q8N9S9 440 aa11.03□□□□□ -0.64
LINC00342-202ENST00000448494 APOPT1Q96IL0 206 aa11.03□□□□□ -0.64
LINC00342-202ENST00000448494 SECISBP2Q96T21 854 aaKnown RBP11.03□□□□□ -0.64
LINC00342-202ENST00000448494 ZKSCAN3Q9BRR0 538 aa11.03□□□□□ -0.64
LINC00342-202ENST00000448494 PKD2L2Q9NZM6 624 aa11.03□□□□□ -0.64
LINC00342-202ENST00000448494 NPAP1Q9NZP6 1156 aa11.03□□□□□ -0.64
LINC00342-202ENST00000448494 RIMKLBQ9ULI2 386 aa11.03□□□□□ -0.64
LINC00342-202ENST00000448494 SDR42E2A6NKP2 422 aa11.02□□□□□ -0.65
LINC00342-202ENST00000448494 LAD1O00515 517 aa11.02□□□□□ -0.65
LINC00342-202ENST00000448494 AURKAO14965 403 aa11.02□□□□□ -0.65
LINC00342-202ENST00000448494 OLFM2O95897 454 aa11.02□□□□□ -0.65
LINC00342-202ENST00000448494 IGKV5-2P06315 115 aa11.02□□□□□ -0.65
LINC00342-202ENST00000448494 EEF1DP29692 281 aaKnown RBP11.02□□□□□ -0.65
LINC00342-202ENST00000448494 MCAMP43121 646 aa11.02□□□□□ -0.65
LINC00342-202ENST00000448494 LEPRP48357 1165 aaKnown RBP11.02□□□□□ -0.65
LINC00342-202ENST00000448494 S100A12P80511 92 aa11.02□□□□□ -0.65
LINC00342-202ENST00000448494 IFITM3Q01628 133 aa11.02□□□□□ -0.65
LINC00342-202ENST00000448494 RHAGQ02094 409 aa11.02□□□□□ -0.65
LINC00342-202ENST00000448494 NME3Q13232 169 aa11.02□□□□□ -0.65
LINC00342-202ENST00000448494 GCKRQ14397 625 aa11.02□□□□□ -0.65
LINC00342-202ENST00000448494 ALX1Q15699 326 aa11.02□□□□□ -0.65
LINC00342-202ENST00000448494 CYP4F22Q6NT55 531 aa11.02□□□□□ -0.65
LINC00342-202ENST00000448494 GADL1Q6ZQY3 521 aa11.02□□□□□ -0.65
LINC00342-202ENST00000448494 CDR2LQ86X02 465 aaPredicted RBP11.02□□□□□ -0.65
LINC00342-202ENST00000448494 ADGRG5Q8IZF4 528 aa11.02□□□□□ -0.65
LINC00342-202ENST00000448494 ZNF654Q8IZM8 581 aa11.02□□□□□ -0.65
LINC00342-202ENST00000448494 OR5H6Q8NGV6 325 aa11.02□□□□□ -0.65
LINC00342-202ENST00000448494 RASGRP4Q8TDF6 673 aa11.02□□□□□ -0.65
LINC00342-202ENST00000448494 FNIP1Q8TF40 1166 aa11.02□□□□□ -0.65
LINC00342-202ENST00000448494 LRRC15Q8TF66 581 aa11.02□□□□□ -0.65
LINC00342-202ENST00000448494 RAB2BQ8WUD1 216 aa11.02□□□□□ -0.65
LINC00342-202ENST00000448494 DEPDC7Q96QD5 511 aa11.02□□□□□ -0.65
LINC00342-202ENST00000448494 RAD21L1Q9H4I0 556 aa11.02□□□□□ -0.65
LINC00342-202ENST00000448494 COPS7BQ9H9Q2 264 aaPredicted RBP11.02□□□□□ -0.65
LINC00342-202ENST00000448494 ZNF221Q9UK13 617 aa11.02□□□□□ -0.65
LINC00342-202ENST00000448494 UGT2A1Q9Y4X1 527 aa11.02□□□□□ -0.65
LINC00342-202ENST00000448494 ATRNO75882 1429 aa11.02□□□□□ -0.65
LINC00342-202ENST00000448494 FLT4P35916 1363 aa11.02□□□□□ -0.65
LINC00342-202ENST00000448494 ISPDA4D126 451 aa11.02□□□□□ -0.65
LINC00342-202ENST00000448494 C7orf72A4D263 438 aa11.02□□□□□ -0.65
LINC00342-202ENST00000448494 PCP4L1A6NKN8 68 aa11.02□□□□□ -0.65
LINC00342-202ENST00000448494 NEURL1BA8MQ27 555 aa11.02□□□□□ -0.65
LINC00342-202ENST00000448494 SULT1B1O43704 296 aa11.02□□□□□ -0.65
LINC00342-202ENST00000448494 ITGB3P05106 788 aa11.02□□□□□ -0.65
LINC00342-202ENST00000448494 SNRPAP09012 282 aaKnown RBP11.02□□□□□ -0.65
LINC00342-202ENST00000448494 DBTP11182 482 aaKnown RBP11.02□□□□□ -0.65
LINC00342-202ENST00000448494 BGNP21810 368 aa11.02□□□□□ -0.65
LINC00342-202ENST00000448494 RBL1P28749 1068 aa11.02□□□□□ -0.65
LINC00342-202ENST00000448494 ETV4P43268 484 aa11.02□□□□□ -0.65
LINC00342-202ENST00000448494 CACNB3P54284 484 aa11.02□□□□□ -0.65
LINC00342-202ENST00000448494 JAM2P57087 298 aa11.02□□□□□ -0.65
LINC00342-202ENST00000448494 VAC14Q08AM6 782 aa11.02□□□□□ -0.65
LINC00342-202ENST00000448494 SNTA1Q13424 505 aa11.02□□□□□ -0.65
LINC00342-202ENST00000448494 PLA2G4EQ3MJ16 856 aa11.02□□□□□ -0.65
LINC00342-202ENST00000448494 KCNT1Q5JUK3 1230 aa11.02□□□□□ -0.65
LINC00342-202ENST00000448494 CORO6Q6QEF8 472 aa11.02□□□□□ -0.65
LINC00342-202ENST00000448494 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.02□□□□□ -0.65
LINC00342-202ENST00000448494 BTLAQ7Z6A9 289 aa11.02□□□□□ -0.65
LINC00342-202ENST00000448494 SLC22A16Q86VW1 577 aa11.02□□□□□ -0.65
LINC00342-202ENST00000448494 DEFB107AQ8IZN7 70 aa11.02□□□□□ -0.65
LINC00342-202ENST00000448494 LILRA2Q8N149 483 aa11.02□□□□□ -0.65
LINC00342-202ENST00000448494 AADATQ8N5Z0 425 aa11.02□□□□□ -0.65
LINC00342-202ENST00000448494 TMEM102Q8N9M5 508 aaPredicted RBP11.02□□□□□ -0.65
LINC00342-202ENST00000448494 SH3KBP1Q96B97 665 aa11.02□□□□□ -0.65
LINC00342-202ENST00000448494 CMTM5Q96DZ9 223 aa11.02□□□□□ -0.65
LINC00342-202ENST00000448494 PKP2Q99959 881 aa11.02□□□□□ -0.65
LINC00342-202ENST00000448494 TRPV6Q9H1D0 765 aa11.02□□□□□ -0.65
LINC00342-202ENST00000448494 STN1Q9H668 368 aaKnown RBP11.02□□□□□ -0.65
LINC00342-202ENST00000448494 TIGARQ9NQ88 270 aa11.02□□□□□ -0.65
LINC00342-202ENST00000448494 CNTN3Q9P232 1028 aa11.02□□□□□ -0.65
LINC00342-202ENST00000448494 SLC17A7Q9P2U7 560 aa11.02□□□□□ -0.65
LINC00342-202ENST00000448494 NXF1Q9UBU9 619 aaKnown RBP11.02□□□□□ -0.65
LINC00342-202ENST00000448494 ZNF229Q9UJW7 825 aa11.02□□□□□ -0.65
LINC00342-202ENST00000448494 PRPF19Q9UMS4 504 aaKnown RBP11.02□□□□□ -0.65
LINC00342-202ENST00000448494 TCRBV7S2A1N4TA0A589 114 aa11.01□□□□□ -0.65
LINC00342-202ENST00000448494 PP2D1A8MPX8 630 aa11.01□□□□□ -0.65
LINC00342-202ENST00000448494 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.01□□□□□ -0.65
LINC00342-202ENST00000448494 PGK2P07205 417 aa11.01□□□□□ -0.65
LINC00342-202ENST00000448494 MLLT10P55197 1068 aa11.01□□□□□ -0.65
LINC00342-202ENST00000448494 MRPS15P82914 257 aaKnown RBP11.01□□□□□ -0.65
LINC00342-202ENST00000448494 ZNF33BQ06732 778 aa11.01□□□□□ -0.65
LINC00342-202ENST00000448494 UBAP2LQ14157 1087 aaKnown RBP11.01□□□□□ -0.65
LINC00342-202ENST00000448494 MGAT5BQ3V5L5 792 aa11.01□□□□□ -0.65
LINC00342-202ENST00000448494 EFHC2Q5JST6 749 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms