RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 MLLT6P55198 1093 aaPredicted RBP21.83■■□□□ 1.08
VPS13B-204ENST00000441350 MMRN1Q13201 1228 aa21.83■■□□□ 1.08
VPS13B-204ENST00000441350 ARTNQ5T4W7 220 aa21.83■■□□□ 1.08
VPS13B-204ENST00000441350 SLC13A5Q86YT5 568 aaPredicted RBP21.83■■□□□ 1.08
VPS13B-204ENST00000441350 WBP2Q969T9 261 aa21.83■■□□□ 1.08
VPS13B-204ENST00000441350 FAF2Q96CS3 445 aa21.83■■□□□ 1.08
VPS13B-204ENST00000441350 ZSWIM3Q96MP5 696 aa21.83■■□□□ 1.08
VPS13B-204ENST00000441350 ZNF670Q9BS34 389 aa21.83■■□□□ 1.08
VPS13B-204ENST00000441350 SMARCAL1Q9NZC9 954 aa21.83■■□□□ 1.08
VPS13B-204ENST00000441350 CWC15Q9P013 229 aaKnown RBP21.83■■□□□ 1.08
VPS13B-204ENST00000441350 RCOR3Q9P2K3 495 aaPredicted RBP21.83■■□□□ 1.08
VPS13B-204ENST00000441350 SNX10Q9Y5X0 201 aa21.83■■□□□ 1.08
VPS13B-204ENST00000441350 HS3ST4Q9Y661 456 aa21.83■■□□□ 1.08
VPS13B-204ENST00000441350 PGRMC1O00264 195 aaKnown RBP21.82■■□□□ 1.08
VPS13B-204ENST00000441350 GREM1O60565 184 aa21.82■■□□□ 1.08
VPS13B-204ENST00000441350 FSHRP23945 695 aa21.82■■□□□ 1.08
VPS13B-204ENST00000441350 ZNF135P52742 658 aaPredicted RBP21.82■■□□□ 1.08
VPS13B-204ENST00000441350 NRG1Q02297 640 aaPredicted RBP21.82■■□□□ 1.08
VPS13B-204ENST00000441350 LLGL1Q15334 1064 aa21.82■■□□□ 1.08
VPS13B-204ENST00000441350 PIK3R6Q5UE93 754 aa21.82■■□□□ 1.08
VPS13B-204ENST00000441350 ING5Q8WYH8 240 aa21.82■■□□□ 1.08
VPS13B-204ENST00000441350 KRT10P13645 584 aa21.81■■□□□ 1.08
VPS13B-204ENST00000441350 AVPR1AP37288 418 aa21.81■■□□□ 1.08
VPS13B-204ENST00000441350 HCAR3P49019 387 aa21.81■■□□□ 1.08
VPS13B-204ENST00000441350 KLF1Q13351 362 aaPredicted RBP21.81■■□□□ 1.08
VPS13B-204ENST00000441350 CLUL1Q15846 466 aa21.81■■□□□ 1.08
VPS13B-204ENST00000441350 ANKRD20A8PQ5CZ79 823 aa21.81■■□□□ 1.08
VPS13B-204ENST00000441350 ATAT1Q5SQI0 421 aa21.81■■□□□ 1.08
VPS13B-204ENST00000441350 ACBD5Q5T8D3 534 aaPredicted RBP21.81■■□□□ 1.08
VPS13B-204ENST00000441350 MANEALQ5VSG8 457 aa21.81■■□□□ 1.08
VPS13B-204ENST00000441350 CES5AQ6NT32 575 aa21.81■■□□□ 1.08
VPS13B-204ENST00000441350 Q7L0L9 218 aa21.81■■□□□ 1.08
VPS13B-204ENST00000441350 MICALL1Q8N3F8 863 aa21.81■■□□□ 1.08
VPS13B-204ENST00000441350 CSPG4P5Q96PW8 444 aa21.81■■□□□ 1.08
VPS13B-204ENST00000441350 RNF157Q96PX1 679 aa21.81■■□□□ 1.08
VPS13B-204ENST00000441350 CDX2Q99626 313 aaPredicted RBP21.81■■□□□ 1.08
VPS13B-204ENST00000441350 HEMGNQ9BXL5 484 aa21.81■■□□□ 1.08
VPS13B-204ENST00000441350 SIK2Q9H0K1 926 aa21.81■■□□□ 1.08
VPS13B-204ENST00000441350 SLITRK6Q9H5Y7 841 aa21.81■■□□□ 1.08
VPS13B-204ENST00000441350 IRF1P10914 325 aa21.8■■□□□ 1.08
VPS13B-204ENST00000441350 GOT1P17174 413 aa21.8■■□□□ 1.08
VPS13B-204ENST00000441350 WEE1P30291 646 aa21.8■■□□□ 1.08
VPS13B-204ENST00000441350 CORO1AP31146 461 aaKnown RBP21.8■■□□□ 1.08
VPS13B-204ENST00000441350 ARL4AP40617 200 aa21.8■■□□□ 1.08
VPS13B-204ENST00000441350 PAFAH1B1P43034 410 aa21.8■■□□□ 1.08
VPS13B-204ENST00000441350 ADCY2Q08462 1091 aa21.8■■□□□ 1.08
VPS13B-204ENST00000441350 CBX2Q14781 532 aaPredicted RBP21.8■■□□□ 1.08
VPS13B-204ENST00000441350 MS4A13Q5J8X5 152 aa21.8■■□□□ 1.08
VPS13B-204ENST00000441350 CCDC181Q5TID7 509 aa21.8■■□□□ 1.08
VPS13B-204ENST00000441350 NADSYN1Q6IA69 706 aa21.8■■□□□ 1.08
VPS13B-204ENST00000441350 ZNF572Q7Z3I7 529 aaPredicted RBP21.8■■□□□ 1.08
VPS13B-204ENST00000441350 DENND1CQ8IV53 801 aa21.8■■□□□ 1.08
VPS13B-204ENST00000441350 NPAS3Q8IXF0 933 aa21.8■■□□□ 1.08
VPS13B-204ENST00000441350 ZNF683Q8IZ20 524 aa21.8■■□□□ 1.08
VPS13B-204ENST00000441350 PCDH19Q8TAB3 1148 aa21.8■■□□□ 1.08
VPS13B-204ENST00000441350 MYLIPQ8WY64 445 aa21.8■■□□□ 1.08
VPS13B-204ENST00000441350 USP13Q92995 863 aaPredicted RBP21.8■■□□□ 1.08
VPS13B-204ENST00000441350 PRMT1Q99873 361 aaKnown RBP21.8■■□□□ 1.08
VPS13B-204ENST00000441350 SMG9Q9H0W8 520 aaKnown RBP21.8■■□□□ 1.08
VPS13B-204ENST00000441350 TCRBV7S2A1N4TA0A589 114 aa21.8■■□□□ 1.08
VPS13B-204ENST00000441350 H3BRJ5 948 aa21.8■■□□□ 1.08
VPS13B-204ENST00000441350 CREB3O43889 395 aa21.8■■□□□ 1.08
VPS13B-204ENST00000441350 ACSL4O60488 711 aa21.8■■□□□ 1.08
VPS13B-204ENST00000441350 LRIG2O94898 1065 aa21.8■■□□□ 1.08
VPS13B-204ENST00000441350 GGCXP38435 758 aa21.8■■□□□ 1.08
VPS13B-204ENST00000441350 SLC11A2P49281 568 aa21.8■■□□□ 1.08
VPS13B-204ENST00000441350 LONRF2Q1L5Z9 754 aa21.8■■□□□ 1.08
VPS13B-204ENST00000441350 HABP4Q5JVS0 413 aaKnown RBP21.8■■□□□ 1.08
VPS13B-204ENST00000441350 Q6ZNB5 142 aa21.8■■□□□ 1.08
VPS13B-204ENST00000441350 EP400NLQ6ZTU2 488 aa21.8■■□□□ 1.08
VPS13B-204ENST00000441350 ZDHHC14Q8IZN3 488 aa21.8■■□□□ 1.08
VPS13B-204ENST00000441350 PQLC3Q8N755 202 aa21.8■■□□□ 1.08
VPS13B-204ENST00000441350 FGF13Q92913 245 aa21.8■■□□□ 1.08
VPS13B-204ENST00000441350 NAP1L3Q99457 506 aaPredicted RBP21.8■■□□□ 1.08
VPS13B-204ENST00000441350 EPAS1Q99814 870 aa21.8■■□□□ 1.08
VPS13B-204ENST00000441350 DCLK3Q9C098 648 aa21.8■■□□□ 1.08
VPS13B-204ENST00000441350 TDP1Q9NUW8 608 aa21.8■■□□□ 1.08
VPS13B-204ENST00000441350 STOML2Q9UJZ1 356 aa21.8■■□□□ 1.08
VPS13B-204ENST00000441350 AGO1Q9UL18 857 aaKnown RBP21.8■■□□□ 1.08
VPS13B-204ENST00000441350 CCL26Q9Y258 94 aa21.8■■□□□ 1.08
VPS13B-204ENST00000441350 BRWD1Q9NSI6 2320 aa21.79■■□□□ 1.08
VPS13B-204ENST00000441350 LEFTY2O00292 366 aa21.79■■□□□ 1.08
VPS13B-204ENST00000441350 EEF2KO00418 725 aaKnown RBP21.79■■□□□ 1.08
VPS13B-204ENST00000441350 LATS1O95835 1130 aa21.79■■□□□ 1.08
VPS13B-204ENST00000441350 HTR7P34969 479 aa21.79■■□□□ 1.08
VPS13B-204ENST00000441350 AUHQ13825 339 aaKnown RBP21.79■■□□□ 1.08
VPS13B-204ENST00000441350 DPYSQ14117 519 aa21.79■■□□□ 1.08
VPS13B-204ENST00000441350 RFX8Q6ZV50 586 aa21.79■■□□□ 1.08
VPS13B-204ENST00000441350 BBS12Q6ZW61 710 aa21.79■■□□□ 1.08
VPS13B-204ENST00000441350 HTR3DQ70Z44 454 aa21.79■■□□□ 1.08
VPS13B-204ENST00000441350 C14orf80Q86SX3 495 aa21.79■■□□□ 1.08
VPS13B-204ENST00000441350 DDX42Q86XP3 938 aaKnown RBP eCLIP21.79■■□□□ 1.08
VPS13B-204ENST00000441350 CFAP97Q9P2B7 532 aa21.79■■□□□ 1.08
VPS13B-204ENST00000441350 NEU3Q9UQ49 428 aa21.79■■□□□ 1.08
VPS13B-204ENST00000441350 NUP210Q8TEM1 1887 aaPredicted RBP21.78■■□□□ 1.08
VPS13B-204ENST00000441350 TJP3O95049 919 aa21.78■■□□□ 1.08
VPS13B-204ENST00000441350 PRAMEF12O95522 483 aa21.78■■□□□ 1.08
VPS13B-204ENST00000441350 TCF3P15923 654 aa21.78■■□□□ 1.08
VPS13B-204ENST00000441350 TPI1P60174 286 aa21.78■■□□□ 1.08
VPS13B-204ENST00000441350 CKAP4Q07065 602 aaKnown RBP21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 423.6 ms